KEGG   Alligator sinensis (Chinese alligator): 102375571
Entry
102375571         CDS       T02922                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X2
  KO
K27498  focadhesin
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asn03019]
    102375571 (FOCAD)
Messenger RNA biogenesis [BR:asn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102375571 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730
Other DBs
NCBI-GeneID: 102375571
NCBI-ProteinID: XP_006034647
UniProt: A0A1U7SMT4
LinkDB
Position
Unknown
AA seq 1803 aa
MSEDIKKRFEFPNTLIQTQGVGHLIAAVLREKVSSAKINQSSNQTPALNLLWEKCCSENV
TVWTACCESLVALVAQEHAEFSYVLNGALNLIPSARNVHGLIKTIGKLLQMQALTVGKNG
DEAVRNLYAIRNPPHPLISVLENRPVCWPVVLQQITVFFQQCQERAQSSCVCIMEPFLRY
LYCEPAQLREHAELRMGLLKILLQPRSPENKETPSVLEHHILQLLCDLIPYFQIKDLSQI
TEVLLFLEDLFQSLLRYPVFWKLQLSQLCLQVLCFCEVCLDIMGECSSLIGLLEQNVELL
QEDFPVEQTIIGLGLLLLQTPASQQKPILNLACKLLSCSETQKIPTTSLVLVMPALQILS
STAVEDCISQEDAGSTRQQLAINLLEIVQQEGMKDGKQLSSCKLVFPITSIYSSLYTTWK
ILQLMKERSTVSDWLSSIKSLLPVTTQVPTHAFLILAYLLVQENGDSLRAVLSATTEIAK
ADYSQVPNLIPVLMFKLGRPLEPVLYRDILYALPTLGVHKICVAQILRVIQVLGNTPKLR
AVSLRLMTSLWERQDRVYPELQRFMAMSDMPSLSVGKDIQWEKLIAKAASIRDICRQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDRR
PLILKTLNELFALVPSLTVNTNDYEKFKVQVVSFLWSHTQNKDPVVAISAYKSLSEFGSE
EHTILHLPEQARPEVDQPEEMDVTEEEEEKGMDLSVPGSAYIKLLSLTPSVILPAFEEFA
ASLVKQEMANMPRGVYHSALRRGATHSDQGKTVAGVPNFLLKMYERNKQPGLKPGLAAGM
LLCYDLPVHMGKDGKPINRFLVSRGRNFQQMLIALIHEVNIQPSEWYRSLLLPPSWLGFM
SRTYHAVLQGRQAELEMQLKHGKEDLEEVQYKQFTAWLWVRDMLSDVIKGASKESPVVKG
NCLLALTGLVVAVAKYESSLSSDIEGGPETQPDFLPTHHWISMVVETLLSIVNSRYRPQG
QVFPWFYQKSYSGENTASAIARSCAAIALSLLVPVFIVSCKEKVEEVLSMLTARLPGNPN
ADESQGVQIHMGLALGMFISRLCEEKVSDVSGQQMNLLLMKSLDALEACCFDTSLEYNTG
CILGVGLVLSLMSHTNQTESRVHISSSLQKLCNYLDESEDQSRTFQEILAYSIACSCISA
FSVRIIEAEEADKVMNKLRTLTENNQQTSGFALALGTIVHGLSVFGHGKAEDLSNRLLPA
WIKIVLAEGSPTMLRLAAVNGLVALVGSEGAMIQLKLDTIQSSQFQNKLNEVIRTLIQIV
SFSGQIALQTNAAWLLGHLHLSSLFSDQSRASVPPDFSYLPENSFIRAAIDYVIEGGKKG
PESIPPTLVKVALAPIALVGKSYQYPPVNWGSILSPLMRLNFGEEIQYLSIELAVTQVQS
SQNAAMLLGMWVVPPLIFSLSMKTREYLFTSLPLWMKHIAEDKLQTFAEIFLVQHFEAKN
RAKNPKLCQSILQGLSQAMKLPTPAQYCWSCLCQATEKIFDFLPNEIQRSEMEMYIDIAK
CLSEMADTEIDRIAQISKKNIEKASFIKVYLVSQGRLPLMSLNDVIGNAIECCWKEPITW
MLLHCFYHARIISHENTGVLKRMDWLLELMGYTRNVAYKSTSIQNVDLKEAVDFLLWIFA
ASVVAWADHAAPLLLGLSASWSPWKPKNASPELSADRIGKHPIDELAVQEMFTLLPSSIQ
LLLAKEPWKEQTQKFIDWILNIMESPKEALSDSSGDLLKAALLALRFFPEFKKKAVWTKA
YGW
NT seq 5412 nt   +upstreamnt  +downstreamnt
atgtcagaagatatcaagaagcgatttgaatttcctaacacgctcattcagacacaggga
gtgggtcatctaattgctgcagtactaagagaaaaagtttcatcagccaagatcaatcag
tcgtctaaccagactcctgcattaaacttgctttgggagaaatgctgcagtgagaatgtg
actgtgtggacagcatgctgtgagagccttgtggcacttgtggcacaggaacatgcagag
ttcagttatgtccttaatggagctctcaatctgattccctctgccaggaatgtgcatggt
ttgataaaaacaattgggaaattgctacagatgcaagcccttactgtgggaaaaaacgga
gatgaggctgttcgaaatttgtatgcaatcaggaaccctcctcatccactaatcagtgta
cttgaaaacagacctgtttgctggccagttgtcctgcagcagataacagtattcttccaa
cagtgccaagagagggcacagagttcatgtgtctgcataatggagccatttctaagatac
ctgtattgtgaaccagcccagttgcgggaacatgctgaactgcgaatgggtctacttaaa
atattacttcaaccgcgaagtccagagaacaaagagacaccttctgtgctagaacaccat
attcttcagttactctgcgacttgattccatattttcagataaaagacttgtcacaaatt
acagaagtattgttgtttctagaagacttattccagagtctactgcgctaccctgtattt
tggaaactccagttgtcccagctttgtctgcaggttttatgcttctgtgaggtgtgtctg
gacataatgggggagtgttcatctttgattggcctactagaacagaatgttgagcttttg
caagaggattttcctgttgaacagaccataattggattaggattgcttttgctacagact
ccagcaagtcagcaaaaacccattttaaatctagcctgcaagctcctttcctgttcagaa
acacagaaaattccaaccacatcccttgtcttggtgatgccagcactgcagatcttatct
tctacagcagttgaggactgcatatcacaggaagatgctggctccactaggcaacagttg
gctataaatcttttggaaatagtacagcaggaaggcatgaaagatggaaagcaattgtca
tcctgcaagcttgtcttccctattaccagtatttacagttcattatatacaacctggaag
atcttacagcttatgaaagagaggtctacagtgtctgattggctgtcttccattaaatca
ctgctacctgttactactcaagtccccactcatgcttttcttatactggcttatctcttg
gttcaagaaaatggagacagtcttcgtgcagtactaagtgccactacagaaatagccaaa
gcagattactctcaggtcccaaatctaatcccagttttgatgtttaaactgggaaggcca
ctggagcctgtgctgtatcgcgatattttgtatgctttgcctactctgggtgtgcataag
atttgtgtagctcaaattctacgtgtaatacaggttctggggaacacaccaaagcttaga
gctgtttctttacgcctgatgacatctttatgggagagacaggatcgggtttacccagaa
ctgcagcggtttatggcaatgtctgacatgccctctttgtctgttggcaaggatattcag
tgggaaaagctaattgctaaagctgcgtctatcagagatatatgtagacagaggccctac
cagcatggagcagatatgttggctgcgatttcccaggtactgaatgaatgcacaaagcct
gatcaagctactcctgctgccttagtattacaaggtcttcatgcactttgccaggctgag
gtcgtttgtattcgttctacatggaacgcgctttcgccaaagctgagttgtgacaggcgt
ccgctcattttgaaaacactgaacgaactgtttgccttggttccctcattaacggtgaat
acaaatgactatgagaaatttaaagttcaagttgtcagcttcctttggagtcatactcag
aacaaggatcctgttgtagcaatttcagcgtacaaatctctgtctgaatttggttctgag
gaacacaccatccttcatcttcctgaacaggcaagaccagaagttgatcagccagaagag
atggatgtcactgaagaggaagaagagaaggggatggacctttctgttcctggctctgct
tatatcaaacttttgtccctaacaccttctgtgattttaccagcatttgaagagtttgca
gcatcacttgtgaaacaagaaatggccaacatgccccgtggtgtttatcattctgcactg
agaagaggggccacacactcagatcaagggaagactgtagcaggagttccaaacttcttg
ttgaaaatgtatgagaggaacaagcaaccaggtctgaagcctggcctggcagctggcatg
ttgttatgttatgatcttccagtccatatgggcaaagatggcaaaccaattaatcgattt
ttggtcagtagggggcgcaatttccagcaaatgttaatagctctcattcatgaggttaac
atacagccttctgaatggtatcgctctctcctgctccctccgtcctggcttggatttatg
agcagaacataccatgcagttttacaggggagacaggcagagctggagatgcagttaaaa
catggaaaagaggatcttgaagaggtgcagtacaaacaatttacagcctggctctgggtc
agagacatgctgagtgatgttatcaagggtgcttcaaaggagagccccgtggtgaaagga
aactgtctcttagctttaactggccttgtagttgctgtagcaaaatatgaaagcagcctg
tcctcagacattgaggggggaccagagactcagcctgattttcttcccacacaccactgg
atttccatggtggtagagacactccttagtattgtgaacagtcgctatcgtcctcaaggt
caagtcttcccatggttctaccagaaatcatattcaggggaaaacacagccagtgcgatt
gctcgctcctgcgcagccattgctttgtctctcttggtgccagttttcattgtatcctgc
aaggagaaggttgaggaagtcctgagcatgctgactgccaggttacctgggaacccaaat
gctgatgagtctcaaggtgttcaaatccacatgggccttgctttggggatgtttatctcg
cgtttgtgtgaagaaaaagtcagtgatgtatctggccaacagatgaatctacttctaatg
aagtccctggatgcactggaagcttgctgctttgataccagtctagagtacaacactgga
tgtatcttgggagtaggacttgttctttcacttatgagtcacaccaaccaaacagagtca
cgagttcacatctcttcctcactacaaaaactctgtaactacctggatgaaagtgaggat
caaagcagaacattccaggagatccttgcctattccattgcctgttcctgcatctctgct
ttcagtgttagaatcatagaagcagaggaagctgacaaggttatgaacaagttgcggact
ttaacagaaaataatcagcagacgtctggttttgccttggcactgggtaccatagttcat
ggtttgtcagtctttggacatgggaaagcagaagacctgagcaacagactgttacctgct
tggataaagattgtacttgcagaggggtctcccacaatgctgcgcctggctgctgtgaat
gggttggttgcattggtgggttctgaaggagccatgatacagttgaaattggacactatt
cagtcttcccagtttcaaaataaacttaatgaagtcatcagaaccttgattcagattgtc
agtttttctggacagattgccctgcagacaaatgcagcctggcttttagggcaccttcat
ctatccagtttgttctcagaccagagcagggcatctgttcctccagacttcagctacttg
cctgaaaacagctttattagggcagctattgattatgtcattgaaggaggcaagaaaggc
cctgaatccattccccctaccttggtgaaggtagccctggcacccattgctttagttgga
aaaagttaccagtatccacctgtgaattggggatcaattctttctcctttgatgagacta
aactttggtgaagagatacaatatctgtctattgaacttgcagtgacccaggtccagtct
tcacaaaatgctgcaatgcttttggggatgtgggtagtaccccctctgatcttcagtctt
agtatgaaaaccagggaatatctttttacttctttgcctctgtggatgaaacacattgca
gaagacaaactgcaaacttttgctgaaatatttctggtacagcattttgaagcaaagaat
cgtgcaaaaaatccaaagctttgccaaagtatcctgcagggtctcagccaagctatgaaa
cttccaactcctgcccagtattgctggagctgtctgtgtcaggccactgagaaaatattt
gactttttaccaaatgagattcagagaagtgaaatggaaatgtatatagatatagcaaaa
tgcctgtcagaaatggctgatacagagattgaccgaattgcccaaatctctaagaaaaat
atagaaaaggcctctttcatcaaagtgtatctagtttctcaaggcagattacctttgatg
agtttgaatgatgtgattggtaatgcaatagaatgctgctggaaagagcctattacatgg
atgttgttgcattgtttctaccatgcccgaatcataagccatgaaaacacaggagtgttg
aagagaatggactggttgttagaactgatgggctatactagaaatgttgcttacaagtca
acttctatacaaaatgtggatcttaaagaggctgtagatttcctgttgtggatattcgca
gcttctgtagttgcctgggctgaccatgctgcaccactactacttggtctcagtgccagc
tggtcaccatggaaacccaaaaacgcatcaccagaattgtctgcagatcgaattggcaag
cacccaatcgatgaacttgctgtgcaggagatgtttactctccttccaagcagtattcaa
cttctgctagctaaagagccttggaaggaacaaacacagaagtttatcgactggattctt
aatataatggaaagtcctaaagaagcactatcggattcttccggagacctattaaaagct
gcacttctggctttgaggttttttccagaattcaaaaagaaagcagtgtggactaaggct
tatggttggtag

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