Alligator sinensis (Chinese alligator): 102375571
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Entry
102375571 CDS
T02922
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X2
KO
K27498
focadhesin
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102375571 (FOCAD)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102375571 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
102375571
NCBI-ProteinID:
XP_006034647
UniProt:
A0A1U7SMT4
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MSEDIKKRFEFPNTLIQTQGVGHLIAAVLREKVSSAKINQSSNQTPALNLLWEKCCSENV
TVWTACCESLVALVAQEHAEFSYVLNGALNLIPSARNVHGLIKTIGKLLQMQALTVGKNG
DEAVRNLYAIRNPPHPLISVLENRPVCWPVVLQQITVFFQQCQERAQSSCVCIMEPFLRY
LYCEPAQLREHAELRMGLLKILLQPRSPENKETPSVLEHHILQLLCDLIPYFQIKDLSQI
TEVLLFLEDLFQSLLRYPVFWKLQLSQLCLQVLCFCEVCLDIMGECSSLIGLLEQNVELL
QEDFPVEQTIIGLGLLLLQTPASQQKPILNLACKLLSCSETQKIPTTSLVLVMPALQILS
STAVEDCISQEDAGSTRQQLAINLLEIVQQEGMKDGKQLSSCKLVFPITSIYSSLYTTWK
ILQLMKERSTVSDWLSSIKSLLPVTTQVPTHAFLILAYLLVQENGDSLRAVLSATTEIAK
ADYSQVPNLIPVLMFKLGRPLEPVLYRDILYALPTLGVHKICVAQILRVIQVLGNTPKLR
AVSLRLMTSLWERQDRVYPELQRFMAMSDMPSLSVGKDIQWEKLIAKAASIRDICRQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDRR
PLILKTLNELFALVPSLTVNTNDYEKFKVQVVSFLWSHTQNKDPVVAISAYKSLSEFGSE
EHTILHLPEQARPEVDQPEEMDVTEEEEEKGMDLSVPGSAYIKLLSLTPSVILPAFEEFA
ASLVKQEMANMPRGVYHSALRRGATHSDQGKTVAGVPNFLLKMYERNKQPGLKPGLAAGM
LLCYDLPVHMGKDGKPINRFLVSRGRNFQQMLIALIHEVNIQPSEWYRSLLLPPSWLGFM
SRTYHAVLQGRQAELEMQLKHGKEDLEEVQYKQFTAWLWVRDMLSDVIKGASKESPVVKG
NCLLALTGLVVAVAKYESSLSSDIEGGPETQPDFLPTHHWISMVVETLLSIVNSRYRPQG
QVFPWFYQKSYSGENTASAIARSCAAIALSLLVPVFIVSCKEKVEEVLSMLTARLPGNPN
ADESQGVQIHMGLALGMFISRLCEEKVSDVSGQQMNLLLMKSLDALEACCFDTSLEYNTG
CILGVGLVLSLMSHTNQTESRVHISSSLQKLCNYLDESEDQSRTFQEILAYSIACSCISA
FSVRIIEAEEADKVMNKLRTLTENNQQTSGFALALGTIVHGLSVFGHGKAEDLSNRLLPA
WIKIVLAEGSPTMLRLAAVNGLVALVGSEGAMIQLKLDTIQSSQFQNKLNEVIRTLIQIV
SFSGQIALQTNAAWLLGHLHLSSLFSDQSRASVPPDFSYLPENSFIRAAIDYVIEGGKKG
PESIPPTLVKVALAPIALVGKSYQYPPVNWGSILSPLMRLNFGEEIQYLSIELAVTQVQS
SQNAAMLLGMWVVPPLIFSLSMKTREYLFTSLPLWMKHIAEDKLQTFAEIFLVQHFEAKN
RAKNPKLCQSILQGLSQAMKLPTPAQYCWSCLCQATEKIFDFLPNEIQRSEMEMYIDIAK
CLSEMADTEIDRIAQISKKNIEKASFIKVYLVSQGRLPLMSLNDVIGNAIECCWKEPITW
MLLHCFYHARIISHENTGVLKRMDWLLELMGYTRNVAYKSTSIQNVDLKEAVDFLLWIFA
ASVVAWADHAAPLLLGLSASWSPWKPKNASPELSADRIGKHPIDELAVQEMFTLLPSSIQ
LLLAKEPWKEQTQKFIDWILNIMESPKEALSDSSGDLLKAALLALRFFPEFKKKAVWTKA
YGW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagatatcaagaagcgatttgaatttcctaacacgctcattcagacacaggga
gtgggtcatctaattgctgcagtactaagagaaaaagtttcatcagccaagatcaatcag
tcgtctaaccagactcctgcattaaacttgctttgggagaaatgctgcagtgagaatgtg
actgtgtggacagcatgctgtgagagccttgtggcacttgtggcacaggaacatgcagag
ttcagttatgtccttaatggagctctcaatctgattccctctgccaggaatgtgcatggt
ttgataaaaacaattgggaaattgctacagatgcaagcccttactgtgggaaaaaacgga
gatgaggctgttcgaaatttgtatgcaatcaggaaccctcctcatccactaatcagtgta
cttgaaaacagacctgtttgctggccagttgtcctgcagcagataacagtattcttccaa
cagtgccaagagagggcacagagttcatgtgtctgcataatggagccatttctaagatac
ctgtattgtgaaccagcccagttgcgggaacatgctgaactgcgaatgggtctacttaaa
atattacttcaaccgcgaagtccagagaacaaagagacaccttctgtgctagaacaccat
attcttcagttactctgcgacttgattccatattttcagataaaagacttgtcacaaatt
acagaagtattgttgtttctagaagacttattccagagtctactgcgctaccctgtattt
tggaaactccagttgtcccagctttgtctgcaggttttatgcttctgtgaggtgtgtctg
gacataatgggggagtgttcatctttgattggcctactagaacagaatgttgagcttttg
caagaggattttcctgttgaacagaccataattggattaggattgcttttgctacagact
ccagcaagtcagcaaaaacccattttaaatctagcctgcaagctcctttcctgttcagaa
acacagaaaattccaaccacatcccttgtcttggtgatgccagcactgcagatcttatct
tctacagcagttgaggactgcatatcacaggaagatgctggctccactaggcaacagttg
gctataaatcttttggaaatagtacagcaggaaggcatgaaagatggaaagcaattgtca
tcctgcaagcttgtcttccctattaccagtatttacagttcattatatacaacctggaag
atcttacagcttatgaaagagaggtctacagtgtctgattggctgtcttccattaaatca
ctgctacctgttactactcaagtccccactcatgcttttcttatactggcttatctcttg
gttcaagaaaatggagacagtcttcgtgcagtactaagtgccactacagaaatagccaaa
gcagattactctcaggtcccaaatctaatcccagttttgatgtttaaactgggaaggcca
ctggagcctgtgctgtatcgcgatattttgtatgctttgcctactctgggtgtgcataag
atttgtgtagctcaaattctacgtgtaatacaggttctggggaacacaccaaagcttaga
gctgtttctttacgcctgatgacatctttatgggagagacaggatcgggtttacccagaa
ctgcagcggtttatggcaatgtctgacatgccctctttgtctgttggcaaggatattcag
tgggaaaagctaattgctaaagctgcgtctatcagagatatatgtagacagaggccctac
cagcatggagcagatatgttggctgcgatttcccaggtactgaatgaatgcacaaagcct
gatcaagctactcctgctgccttagtattacaaggtcttcatgcactttgccaggctgag
gtcgtttgtattcgttctacatggaacgcgctttcgccaaagctgagttgtgacaggcgt
ccgctcattttgaaaacactgaacgaactgtttgccttggttccctcattaacggtgaat
acaaatgactatgagaaatttaaagttcaagttgtcagcttcctttggagtcatactcag
aacaaggatcctgttgtagcaatttcagcgtacaaatctctgtctgaatttggttctgag
gaacacaccatccttcatcttcctgaacaggcaagaccagaagttgatcagccagaagag
atggatgtcactgaagaggaagaagagaaggggatggacctttctgttcctggctctgct
tatatcaaacttttgtccctaacaccttctgtgattttaccagcatttgaagagtttgca
gcatcacttgtgaaacaagaaatggccaacatgccccgtggtgtttatcattctgcactg
agaagaggggccacacactcagatcaagggaagactgtagcaggagttccaaacttcttg
ttgaaaatgtatgagaggaacaagcaaccaggtctgaagcctggcctggcagctggcatg
ttgttatgttatgatcttccagtccatatgggcaaagatggcaaaccaattaatcgattt
ttggtcagtagggggcgcaatttccagcaaatgttaatagctctcattcatgaggttaac
atacagccttctgaatggtatcgctctctcctgctccctccgtcctggcttggatttatg
agcagaacataccatgcagttttacaggggagacaggcagagctggagatgcagttaaaa
catggaaaagaggatcttgaagaggtgcagtacaaacaatttacagcctggctctgggtc
agagacatgctgagtgatgttatcaagggtgcttcaaaggagagccccgtggtgaaagga
aactgtctcttagctttaactggccttgtagttgctgtagcaaaatatgaaagcagcctg
tcctcagacattgaggggggaccagagactcagcctgattttcttcccacacaccactgg
atttccatggtggtagagacactccttagtattgtgaacagtcgctatcgtcctcaaggt
caagtcttcccatggttctaccagaaatcatattcaggggaaaacacagccagtgcgatt
gctcgctcctgcgcagccattgctttgtctctcttggtgccagttttcattgtatcctgc
aaggagaaggttgaggaagtcctgagcatgctgactgccaggttacctgggaacccaaat
gctgatgagtctcaaggtgttcaaatccacatgggccttgctttggggatgtttatctcg
cgtttgtgtgaagaaaaagtcagtgatgtatctggccaacagatgaatctacttctaatg
aagtccctggatgcactggaagcttgctgctttgataccagtctagagtacaacactgga
tgtatcttgggagtaggacttgttctttcacttatgagtcacaccaaccaaacagagtca
cgagttcacatctcttcctcactacaaaaactctgtaactacctggatgaaagtgaggat
caaagcagaacattccaggagatccttgcctattccattgcctgttcctgcatctctgct
ttcagtgttagaatcatagaagcagaggaagctgacaaggttatgaacaagttgcggact
ttaacagaaaataatcagcagacgtctggttttgccttggcactgggtaccatagttcat
ggtttgtcagtctttggacatgggaaagcagaagacctgagcaacagactgttacctgct
tggataaagattgtacttgcagaggggtctcccacaatgctgcgcctggctgctgtgaat
gggttggttgcattggtgggttctgaaggagccatgatacagttgaaattggacactatt
cagtcttcccagtttcaaaataaacttaatgaagtcatcagaaccttgattcagattgtc
agtttttctggacagattgccctgcagacaaatgcagcctggcttttagggcaccttcat
ctatccagtttgttctcagaccagagcagggcatctgttcctccagacttcagctacttg
cctgaaaacagctttattagggcagctattgattatgtcattgaaggaggcaagaaaggc
cctgaatccattccccctaccttggtgaaggtagccctggcacccattgctttagttgga
aaaagttaccagtatccacctgtgaattggggatcaattctttctcctttgatgagacta
aactttggtgaagagatacaatatctgtctattgaacttgcagtgacccaggtccagtct
tcacaaaatgctgcaatgcttttggggatgtgggtagtaccccctctgatcttcagtctt
agtatgaaaaccagggaatatctttttacttctttgcctctgtggatgaaacacattgca
gaagacaaactgcaaacttttgctgaaatatttctggtacagcattttgaagcaaagaat
cgtgcaaaaaatccaaagctttgccaaagtatcctgcagggtctcagccaagctatgaaa
cttccaactcctgcccagtattgctggagctgtctgtgtcaggccactgagaaaatattt
gactttttaccaaatgagattcagagaagtgaaatggaaatgtatatagatatagcaaaa
tgcctgtcagaaatggctgatacagagattgaccgaattgcccaaatctctaagaaaaat
atagaaaaggcctctttcatcaaagtgtatctagtttctcaaggcagattacctttgatg
agtttgaatgatgtgattggtaatgcaatagaatgctgctggaaagagcctattacatgg
atgttgttgcattgtttctaccatgcccgaatcataagccatgaaaacacaggagtgttg
aagagaatggactggttgttagaactgatgggctatactagaaatgttgcttacaagtca
acttctatacaaaatgtggatcttaaagaggctgtagatttcctgttgtggatattcgca
gcttctgtagttgcctgggctgaccatgctgcaccactactacttggtctcagtgccagc
tggtcaccatggaaacccaaaaacgcatcaccagaattgtctgcagatcgaattggcaag
cacccaatcgatgaacttgctgtgcaggagatgtttactctccttccaagcagtattcaa
cttctgctagctaaagagccttggaaggaacaaacacagaagtttatcgactggattctt
aatataatggaaagtcctaaagaagcactatcggattcttccggagacctattaaaagct
gcacttctggctttgaggttttttccagaattcaaaaagaaagcagtgtggactaaggct
tatggttggtag
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integrated database retrieval system