Alligator sinensis (Chinese alligator): 102375890
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Entry
102375890 CDS
T02922
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102375890 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102375890 (SCARF1)
Membrane trafficking [BR:
asn04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102375890 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
102375890
NCBI-ProteinID:
XP_014379788
UniProt:
A0A1U8DEV6
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAAAPCPRTGGRSPVAAVSSLLGVLAPGLTSPLHASDDDYDDKGSWLPAPEAGSVGAQTP
GSKIRSFFGPWYRGSSSSDASRPGSAGAWGIVDSQGSRKEETPSQGEEASDPEETDGLEG
EHCAGQPGMARLRVLFCLQLLPWAWGSVQELDAAGRNVCVDKRAACAAEEGWVKPGVCRC
KPGFFGAHCSSRCPDQYWGPDCKQSCLCHPHGKCNPVTGHCTCHANRWGPLCQFPCPCGP
HGRCHPLTGACLCEPGWWAPTCKRQCQCNLSGSRCDPATGQCLCAQGWWGRRCSLPCACH
LSPCAQDSGKCECKAGFWGSLCQHPCDCLHGSCSPLTGSCTCSPGYQGRSCRDPCPAGHY
GPQCKHSCGHCKRSQPCSPMDGFCLACEPGWNGTLCNQPCLPGRHGENCSQACPQCRGGE
TCHPKTGACQDCDPGWTGPSCDAPCPDGMFGDRCQLPCPVCIKGRCDPVSGECVCQAGYW
GSSCNETCQDGFFGVNCSSPCPCTGGPCHPLSGDCALRSHYQGALIAGVLVPLLLLLLCI
ACCCCCGTGQVEARDRAAVADADVLSRMKHHMQGVLANLSSMLPCFSLGGYKLPRVTVSH
HDTEIPFNPSFIEPPSAAWASDSSFSSFDSDDDGPAYCVPTIAMEDVPAGSELQEGGSPG
NELPDATAFNSEDVSQPFIIPRTSSIAKAKRPSVSFAEGTKFGPQCRSGSVEMPSTSRKP
KASWGLPKPPPADVEESAQPSGRPNDYENAEPIATGEDSHRPSPRSTPGGRRRVVSSTRH
VAQRVEALEAASKVEQNVTTIYMTVGTARRGTRHSGGSQGSGEGPVQAVLKRLGSFQRGK
RASKEEPKVCRGPESIQKPPRRALGQERDSTYTPTPPQQRESTKSLGPGTAEPPAEQQQH
CPGQRPSPIPAAPGVWDAEAQGEDEAEKSEGPERAGNLEANGQAAAEEEEPKYENVTPYH
SSLPRSPSGESPATAAEHEASP
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctccgtgccccaggacaggaggcaggagcccagtggccgcagtctcttcc
ctgctcggggtcttggccccaggtctgacttctcctttgcacgctagtgatgatgattat
gatgacaagggctcgtggctcccggcgcccgaagcgggcagtgtgggcgctcagacccct
ggctccaaaatcagaagcttttttggcccgtggtatcgtggcagtagcagctcggacgcc
tcccggccaggcagcgctggagcgtggggaatcgttgactcgcagggaagcagaaaggag
gaaactccaagccagggagaggaagcaagcgacccggaggagacggacgggctggagggc
gagcactgcgctgggcagcctggcatggcgcggctgcgggtcctgttctgcctccagctc
ctgccctgggcctggggctccgtgcaggagctggacgcagccgggaggaacgtgtgcgtg
gacaagagggccgcctgcgcggcggaggaggggtgggtgaagccgggggtctgccgctgc
aagcctggcttcttcggggcccactgcagctcccgctgccccgaccagtactggggccct
gactgcaagcagagctgtctgtgccacccgcacgggaagtgcaaccccgtcaccggccac
tgcacgtgccatgccaatcgctggggacctctctgccagttcccgtgcccgtgcgggcct
cacggtcgctgccaccccctcaccggagcttgcctgtgtgagccgggctggtgggcaccg
acctgcaagcggcagtgtcagtgcaacctgtctggctcccgctgcgaccccgccaccggg
cagtgcctctgtgcccaaggctggtggggcaggcggtgcagcttgccgtgcgcctgccac
ctctccccgtgcgcccaggactcggggaagtgcgagtgcaaggcggggttctggggctcg
ttatgccaacacccgtgcgactgcctgcacgggagctgcagccccctcactgggtcctgc
acctgcagccctggctaccagggcaggagctgcagggacccctgcccagccgggcactac
ggaccgcagtgcaagcacagctgcgggcactgcaagcggagccagccctgctcgcccatg
gatgggttctgcctggcctgcgagccgggctggaacgggaccctgtgcaaccagccctgc
ctgcctggacgccacggggagaactgttcccaggcctgtccccagtgccggggtggggag
acctgccacccgaagactggcgcctgccaggactgcgatcccggctggacaggacccagc
tgcgatgcgccctgcccggacggcatgtttggggacaggtgccagctcccctgcccagta
tgcatcaaagggcgctgcgacccggtgtctggggagtgcgtctgccaggctgggtactgg
ggcagcagctgcaatgagacctgtcaggatgggttctttggtgtgaactgctcgtccccg
tgcccgtgcacagggggcccctgccacccactctccggggactgtgcactcaggtctcac
taccagggcgccctgatcgcaggcgtgcttgtcccactgctgctcctgctgctctgcatc
gcctgctgctgctgctgtgggaccggccaggtggaagcgagggacagggcagccgtagcc
gacgcggacgtgctgtcccgaatgaagcaccacatgcagggggtgctagccaacctcagc
tccatgctgccttgcttctcgctggggggctacaagctcccccgggtcacagtctcgcac
cacgacacggagattcccttcaaccccagcttcatcgagccgccctctgcagcctgggcc
tcggacagctccttctcctccttcgactcggacgacgacggcccggcctactgcgtccct
accattgccatggaagatgtgccagcaggctctgagcttcaggaaggcggctccccaggg
aacgagttgccggacgcaacagcctttaactcggaagacgtctcccagccgttcatcatc
ccccgcacgtccagcattgccaaggccaagaggccctcggtgtcgtttgccgaaggcacc
aagtttggccctcagtgcagaagcggctctgtagagatgcccagcacctcccggaagccc
aaggcctcttggggtctccccaagcctccaccggccgacgtggaggagagtgcccagcca
agtgggcggcccaatgactacgaaaacgcagagcccatcgccacgggcgaagacagccac
cggccctcgccccggagcaccccagggggccggaggagggtggtatccagcacccggcat
gtggcccagagggtggaggccctcgaggcagcttcaaaggtggagcagaacgtcacgacc
atttacatgacggtgggcacggcgaggaggggcacccggcacagcgggggcagccaaggg
agcggagaggggccggtgcaggcggttctcaaacggctgggcagtttccagagaggcaaa
agggcctccaaggaggagcccaaagtgtgcagaggccctgagagcatccagaagcctccc
cgtcgggccctgggccaggagagggactccacatacacccccaccccgccccagcagaga
gagagcaccaagagcctaggcccgggcaccgctgagccgcccgcagagcaacagcagcac
tgtcctgggcagagaccgtctcccatccccgcagcgcctggggtttgggacgcggaggcc
cagggagaagatgaggccgagaagagcgagggtcccgagcgagctggaaatctagaagca
aacggacaggcagcagctgaggaagaggagccaaagtatgagaacgtgactccctatcac
agcagcctgcctcgcagcccctcgggagagtccccggccaccgccgcagaacatgaggcc
agcccctga
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