Alligator sinensis (Chinese alligator): 102376484
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Entry
102376484 CDS
T02922
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102376484 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102376484 (NUP98)
03036 Chromosome and associated proteins [BR:
asn03036
]
102376484 (NUP98)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102376484 (NUP98)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102376484 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102376484
NCBI-ProteinID:
XP_006032138
UniProt:
A0A1U7SKE7
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MFNKSFGTPFGGTAGFGTTSTFGQNAGFGTTSGGAFGASAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATASLFGSSAATSSAATG
LFGSTTTNTGFSYGQNKTGFGTSTTGFGTGTTGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGNTSTLGQPNTNTMGLFGATQPTQSGGLFGTTANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPATFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGTNTAGTSL
FGNKPTTGSLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSMATLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTSGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLSSSNLFSPVSREAEDLASPSEYPENGERFNFLSRSIDENHRQDGEPEEEDDHHE
VTRFYTNPIAKPIPQTPENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASYHEESLQ
DDREDETENMHHLHPAGIVLTKVGYYTIPSMEELAKLTNDRGECILTDFTIGRKGYGSIY
FEGEVNLTNLNLDEIVHIRRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCL
IKSPERLTDMNYEGRLEAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEEH
SAKADTKKLKTAPVPPQGQPVPQQMALNGKPAPPSQSPEVEQLGRVVELDSDMTDITQEP
AQDSMLEDAVTEDQEPVPASTHIASSLGINPHVLQIMKASLLADEEDLDLILDRHFGKQS
TKMDTSQEICSPRLPISALQGQKKRSSVGGLLQSKFAGVSLLPSASLQDSRGPRTSSFGK
APPPAPWSVFSPLASVFTVPAAAPEPQVKTVGTRRQQGLVPLEKSITYGKGKLLIDMALF
MGRSFRVGWGPSWTLINCGDQVSESSEAKHLRNTSMEYGFLPAPVAPKSLSESSFKVHIE
KLNLEQKKTEGDKQLYLLPLEIKLKHSTVHLDDYCPFIAPNPGVAAIHDYADWVREVSGD
PAEIENVVKHWGLTWTLCEAIWGNLKELEASLEDPSEYILTLERRKAFSRWLSQTAAGRI
EEEVSLSRHDNHIEAVFSYLTGKRISEACRLAQQSGDYRLALLLSQLVGSQEVRELLTMQ
LVDWHRLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRCIAIHLWYLLPP
TASISKALGMYEAAFQNTLESEKYACCPLPPYLEDSGCALEEDDSANRPLRDVCFHLLKL
YSDRHYDLHQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLES
KGLWEWAIFVLLHTSNAHTREKAVRELLTRHCVLPETPESWTKEAFLTQKLCVPPEWIHE
AKAIRARMEGDKHKEALYLFRAGHWNQCHKLVIRHLASDAIINENYKYLKGFLEDLSPPE
RSTLIQDWDTAGLVYLDYIRVIEMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSA
KDRLAQSDMAKRIANLLRVVLSLQHSPEPASDSTPDVQRVPLRLLAPHIGRLPMPEDYAL
EELRGLTQSYLRELTVVTQ
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccatttggaggcactgctggctttgggactacttca
acctttggacaaaatgccggctttggtactaccagtggaggagcatttggagcatcagcc
ttcgggtcaaacaataatacaggaggcctctttgggagcacacagaccaaaccaggagga
ttgtttggttcgaccacgtttaatcaaccggccacctcctccacaagcactggttttggg
tttgggacctcaactggaacttcaaacagcttatttgggacaaccagcactggtggaggt
ctcttttcatcccagaataatgcctttgcacagaataaaccagctgggtttggaaacttt
gggacaagtaccagcagtggaggtctctttggaaccactaacactacctccaatcctttt
gggagtacatctggctctctctttggtccaactagctttaccgctgctccaactggcacg
actattaaatttaatccaccaactggcacagatactatggtaaaatctggagttagtact
aacatcagcaccaagcaccaatgtattactgctatgaaggagtatgaaagcaaatcctta
gaggaactccgtttggaagattaccaagcaaacaggaaagggccctcgaacccagtggga
gcaggagcaactgccagtttatttggatcctctgcagccacatcaagtgctgctactgga
ctgttcggctccaccaccactaacacgggtttttcctacggacagaataaaactggcttt
ggaaccagtacaactggctttggcacgggaacaactgggggtctctttggtcagcagcct
cagacaactagtctgttcaataaaccgtttggccaggccacgacaacacagaacaccggt
ttctcttttgggaacaccagcactcttgggcagccaaacacaaacacaatgggtttattc
ggggcaacccaacccacacaatcaggaggcctttttggaacaactgccaacacaaatgct
ggtactggatttggaactggaactggtctctttggacaagccaacacaggattcggtgtt
gggggttcgaccctgtttggtaacaagcctgccacgtttggaaccaccacgaccagtgct
ccttcgtttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtacaaacactgctggcactagtctg
tttgggaataagcctacaactgggtctctgggaactggactcggaactggatttgggaca
gctcttggtgcaggccagacttcattatttgggaacacccagcctaaactaggtgggacc
ctgggaaccggagcatttggagcaccgggattcaacacgtcaatggctaccctgggcttt
ggagctcctcagcctgctgtggcactgactgaccccaatgcttcagcggcccagcaagca
gtccttcagcagcacctcaacagcttgacctattcaccctttggagattctcctctcttc
agaaaccccatgtcagacccgaaaaagaaagaagagaggttgaaaccaaccaacccagcg
gcacagaaggctttgactacacccactcactacaaactgacccctcgtcctgcaactcga
gtgagacccaaagctctgcagacttcgggctcagccaaatctcacctctttgatggtctg
gatgatgatgagccctccctatccaacggtgctttcatgcccaagaagagcatcaagaag
ctggttttgaaaaacctcagcagcagtaacctgttttctcccgtcagtcgcgaagctgaa
gacctggcctctccatcagagtatccagagaacggagagcggttcaactttctgtcccgc
tctattgatgagaaccacagacaggatggtgagccagaggaagaggacgatcatcacgaa
gtgactaggttttacacaaaccccattgccaaacccatcccacagaccccagagaacgct
gtgcacaaacaccagaacagcgtggatgataccattgtggctctgaatatgcgggttgcc
ttgcgaaatggactggaaggcagcagtgaagatgcctcgtatcatgaagagtctctgcag
gatgaccgtgaagatgagactgagaacatgcatcatctgcacccagcaggaattgttctc
acaaaagtaggctactataccatcccgtctatggaggagctggccaagcttaccaatgac
agaggagagtgtatcttgacagatttcaccataggtcgtaaaggttatggatcaatttac
tttgaaggagaagtgaacctaactaatttaaatctggatgagattgtgcacatccgtagg
aaagaagttattgtctaccctgatgatgaaaggaaaccacctgttggtgaaggtttaaat
aggagagcagaggttacgttagatggagtttggccaacagataagacatctcgttgcttg
ataaagagccctgaacggctaacagatatgaattatgaaggcagactggaggccgtatct
cggaaacagggagctcagttcaaggagtaccgtccagagactggttcttgggtgtttaag
gtggctcatttctctaaatatggcctgcaagactctgacgaggaggaagaggaagagcat
tctgcaaaagcggacacaaagaagttaaaaactgctccagtgccaccccaggggcagcca
gtgccccagcagatggccctgaatgggaaaccagcaccaccgtctcagagcccagaagtg
gaacagctgggaagggtggtcgaactggacagtgatatgaccgacatcacccaggaacct
gcccaagactccatgctagaagatgctgtgactgaagatcaggaacccgtgcctgcatca
acacacattgcatcctcactgggcataaacccccacgtgttgcagatcatgaaagcttcc
ttgctggctgatgaagaggatttagatttgatcctagatcgtcattttggcaaacagtct
acgaaaatggatacttctcaagaaatctgctctcccagacttccaatttcagctttgcaa
ggacagaagaaacgctcctcagttggtggattgctgcaatcaaaatttgccggcgtctct
ctccttccaagtgcctctttacaagattctcgtggaccaagaacttcctcttttggcaaa
gcccctcctccagcaccttggtctgtgttttccccgcttgcctctgtgttcaccgtccct
gctgcagccccagagccacaggtgaagacagtgggtacccgcaggcagcaggggctggtg
cctctggagaaatccattacctatggaaaaggaaaactcttgatagacatggcactcttc
atgggacgctcgtttcgggtcggctggggacccagttggactcttatcaattgcggagat
caagtgagcgagtccagtgaggcaaagcatcttcgcaacacatctatggaatatgggttc
ttgccagctcctgttgctcccaaatcgctttcagagtcgtccttcaaagttcacatagag
aagctgaacttggaacagaagaagacagaaggtgacaagcaattatacctcctacctctg
gagataaaactgaaacacagcactgtccatttggatgattattgtcctttcatagccccc
aacccaggagtggctgccattcacgactatgctgactgggttagagaggtctccggagac
cctgcagaaattgaaaacgtggtgaagcactggggtctgacgtggactctgtgcgaggca
atctggggcaacctgaaagagttggaagccagtttggaggatcccagcgagtacatcctg
accctggagcgcaggaaagccttctcgcgctggctatcgcagaccgcagccgggcggatc
gaggaggaggtttcgctctcgcggcacgataaccacattgaggctgtgtttagctacctc
actgggaagcggatcagcgaggcttgtaggttggcacaacagtcaggtgattacagactt
gctctactcctctcccagctggtgggcagccaggaggttcgggagctcctcaccatgcag
ttagtggactggcacaggctgcaggcagactgcttcatccaggaagagaggttacgcatc
tttgctctgcttgctggaaagccggtgtggcagttatctgagaggaaaagcattaatgtt
tgctcacagctggactggaagcgctgtatagctatccatctctggtacctgcttccacct
acagcttccatttccaaggcactcggcatgtatgaggcagcgttccagaacacgctggag
tcggagaagtatgcctgctgtccccttcctccctatctagaggactcaggctgcgcactt
gaggaagatgacagcgcaaacaggccgctgcgagatgtctgctttcatctgttaaagctc
tacagtgacagacattacgatctccatcagctgctggaccccaggagtataacgtctgac
cccttggactaccgtctcagttggcacctgtgggaagtgctcagagccctgaattacaca
cacttatcggaacagtgtcagggagtgctgaatgccagctacgctgcccagctggaaagc
aaagggctctgggaatgggccatctttgtgctgttgcatacctctaatgcacacactcgt
gaaaaggcagtgcgtgagctcttaacccgccactgcgtgctgcccgagacgccagaatcc
tggacaaaagaagccttcctgacgcaaaagctctgcgttcccccagagtggattcacgag
gcaaaggccattcgggcaaggatggagggagataagcataaggaggcgctctacttattc
agagctgggcactggaaccagtgccacaagctggtcatcaggcacttagcctcagatgcc
attatcaatgagaactacaagtacctgaaaggcttcctggaagatttgtcccccccagaa
cggagtacgctcatccaggactgggacacggcagggctggtttatttggactatatccgg
gtcattgagatgctcgacaggattcagcagctggattgttccacatacgagttggagaga
ttacataccaaagtgacgtcgctatgcaataggatagaacagatacagtgccacagcgcc
aaggaccgattggctcagtcagacatggctaagcgcatcgctaacctgctgcgggtggtg
ctgagcctgcagcactctccagagcctgcctccgactccacgcccgacgtgcagcgagtc
cctctccgcttgctcgcgccccacattggccggctccccatgccggaggactatgccctg
gaggagctgcgtggcctcacccagtcctacctacgggaactgacggtggtgacgcagtga
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integrated database retrieval system
