Alligator sinensis (Chinese alligator): 102376629
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Entry
102376629 CDS
T02922
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102376629 (UPF3B)
03015 mRNA surveillance pathway
102376629 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102376629 (UPF3B)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102376629 (UPF3B)
mRNA cycle factors
P-body specific factors
102376629 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
Motif
Other DBs
NCBI-GeneID:
102376629
NCBI-ProteinID:
XP_025065705
UniProt:
A0A3Q0H5N1
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTG
TIDDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKRTTPLLNFLKNKQRLRE
EKREERRRRELERKRQREEERRKWKEEERRKRKEAEKLKKVERFPEKERDKSKDEPKIKL
LKKPEREERDLERKEKSKKLEKEREEKNIAALSTVSAKRSDGEAKEEKAKKSEDECGKDY
RDRDRDFERDREKLRRQDDDRRRQRERFDREKVFRRKEEEVKKERDSFREKGKKSDLMDF
ASNPDKFERATKDDKKEDPIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPSDQG
TDKKQESETSNTKEEE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcgagcctacatcaactttaaaaaccaagaagacatagtactattcagggat
cgttttgacggttatgtttttgttgatcacaaaggtcaggaatatgctgccatagtggaa
tttgcaccattccaaaaagctgcaaaaaagaagagtaagaaaaaggatgccaaaactggg
actattgacgatgacccagagtataagaagtttttggaaagttacagtgcagatgacgaa
aaattaacatctactcctgaaacgctactggaggaaatagaagcaagaaacaaagagcta
atagcgaaaagaacaactcctcttctgaacttcttgaaaaataagcagagactgagagaa
gaaaagagagaggagaggagaaggagagaactggaaagaaaaagacagagagaagaagaa
aggagaaagtggaaagaggaggagagaaggaaaagaaaagaagcagagaaattgaagaaa
gtagaaagatttccagagaaagaaagggacaaatcaaaagatgaaccaaagattaagcta
cttaaaaagccggagagagaggaacgcgatttggagagaaaggaaaagtccaagaagctg
gaaaaagagagggaagaaaaaaacattgctgccctaagtactgtatcagccaaacgatct
gacggggaggcaaaagaggagaaggcaaaaaagtctgaagatgagtgtggaaaagactac
agggaccgggatagagactttgagagagaccgagaaaaactgaggcgccaagatgatgac
cgccgcagacagagagagcgctttgatagagagaaggtttttagaagaaaagaggaagag
gtgaagaaggagagagactcgttcagagagaaaggaaagaaaagtgatcttatggacttc
gcaagtaatcctgataaatttgagagagcaaccaaagatgacaaaaaagaggatccaatt
aagagagatcggatcagaaacaaggatcgtccagcaatgcagctataccaaccaggagcc
cgaagccgaagtcgactttgtcagtatgaagacagtgctgcaaaaccttcagatcaggga
acagataaaaaacaggaaagtgagaccagtaacacaaaagaggaggagtga
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