Alligator sinensis (Chinese alligator): 102376640
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Entry
102376640 CDS
T02922
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102376640 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asn03041
]
102376640 (USP39)
Spliceosome [BR:
asn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102376640 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102376640
NCBI-ProteinID:
XP_006031254
UniProt:
A0A1U7RY29
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MYERHQRGNANRMETGIRSKADAHRLCVSAHAQKGGMRYGRFDPEDRRSRHCPYLDTINR
SVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY
CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN
DYANAVLQALSNVPPLRNYFLEEDNYKSIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAH
VSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHAALGGTKRKKKTIVTDVFQGSM
RIFTKKLPHPDLPAEEKEQLLLNTEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV
PLFNILAKFNGITEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNF
PITNVDLREYLSEEVQATHIHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQ
VTDILPQMITLSEAYIQIWKRREDEETIQQGA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagagacaccagaggggaaatgcgaatcggatggaaacagggatccgtagtaaa
gcagacgcccacaggctctgcgtgtcggcgcatgcgcaaaaaggcggaatgcgctacgga
cgctttgaccccgaggaccggcgcagccgccactgcccctacctagacaccatcaacagg
agcgtcctggacttcgactttgagaagctctgctccatctccctgtcgcacatcaacgtc
tatgcctgccttgtctgcggcaagtacttccagggccgcggcctgaagtcccacgcctac
atccacagtgtgcagttcagccaccacgtcttcctgaacctgcacacgctcaagttctac
tgcctgcctgacaactacgagatcattgactcctcactggaggatatcacgtatgtgctg
aagcccacgttcaccaaacaacagattgccaacttggacaagcaggccaagctctcgcgg
gcatatgacggtaccacctatctgccaggcattgtgggattgaataacatcaaggccaat
gactatgccaatgctgtgctccaggctctgtccaatgttccacccctccgtaactacttc
ctggaagaagacaactacaaaagcatccagcgcccaccaggagacatcatgttcctgttg
gttcagcgcttcggggagctgatgcggaaactatggaacccccgtaacttcaaggcccat
gtgtccccccatgagatgctgcaagccgtggtgctctgcagcaagaagaatttccagatc
accaagcaaggcgatggcgtggatttcctctcctggttcctcaatgcccttcatgctgct
ctaggcgggacgaagaggaagaaaaagaccatcgtgactgatgtcttccagggctccatg
cgcatcttcaccaagaagctgccgcaccctgacctgccagcagaggagaaagagcagctg
ctgctgaatactgagtaccaggagaccatggtggagtcgaccttcatgtacctgacactg
gacctgcccacagccccactctacaaagacgagaaggagcagctcattatcccccaggtg
cccctcttcaacatcctggccaagttcaatggcatcaccgagaaggagtacaagacatac
aaggagaacttcctgaagcggttccagctgacccgactgccaccctacctcatcttctgc
atcaagcgcttcaccaagaacaacttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaacgtggacctccgcgagtacctttcagaagaggtccaggccacacacata
cacacaacgtacgacctcatcgccaacattgtccatgatggaaagcccagcgagggctcc
taccgcatccatgtgctgcatcacggcacaggcaagtggtacgagctgcaggacctccag
gtgactgacatcctgccccagatgatcacactctctgaagcctacatccagatctggaag
aggcgagaggatgaggagaccatccagcagggtgcgtga
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