Alligator sinensis (Chinese alligator): 102376666
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Entry
102376666 CDS
T02922
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04140
Autophagy - animal
asn04148
Efferocytosis
asn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102376666 (VPS16)
04148 Efferocytosis
102376666 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102376666 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102376666 (VPS16)
Membrane trafficking [BR:
asn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102376666 (VPS16)
Hops complex
102376666 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
GCN5L1
Motif
Other DBs
NCBI-GeneID:
102376666
NCBI-ProteinID:
XP_014382441
UniProt:
A0A1U8DQ23
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MAWDLAEELRDCLMAAAPYGGPIALLKNNWRKEKSPGSRPVLEIYSAAGLPLASIVWKSG
QVVQLGWTASEDLLCIQEDGSVLIYNLFCEFKRHFSMGNEVLQNHVLEARVFHTEYGTGV
AILTGAHRFSLATNIDDLKLRRMHDVMPSLQKPPSCWAVLFQDRVTVILLATGQELYLLD
NTSCNAMTPPGLSPQAGAYLQMAVSFNYRYVALYTDTGYIWMGTATLKEKLGEFSCDIHA
PPREMVWCARPRSKQRAVVVAWDRRLMVAGNTEECIQFVLDEDSYLVPELDGVRIFSRTS
HEFLHEIPEASQEIFRIASMAPGALLLEAQKQYEKESQKADEYLREIKDKEQLSEAVQQC
IEAAGYEHEPETQKSLLRAASFGKCFLDRFSPESFVRMCQDLRVLNAIRDYQIGIPLTFA
QYKQLTIEVLLDRLILRRLYPLAIKICEYLRLSEIQGVSRILAHWACYKVQQKDKSDEEV
AQAINQKLGDTPGISYSEIAGRAYECGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALS
KAIESGDTDLVYTVVLHLKNELNRGNFFMTLQNQPVALSLYRQFCKHQERETLKDLYNQD
DNHQELGNFHVHTSYANEKRIEGRVAALQNAVDEYYKAKNEFAAKATEDQIKLLRSQHRL
QEGFGPPPXXXXTISHLILDGKHKRAEQLYREFKIPDKRFWWLKISSLAECGDWEEMEKF
SKSKKSPIGYLPFVEICVKYHNRHEAKKYAARVTPEQRVKAFILVGDLDQAADAAIEHKS
ESEMSLVLAKCSPAIDATVVEKLNRARAQILKK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacctggcggaggagctgcgggactgcctgatggccgctgcgccgtatggg
ggccccatcgcgctgctgaagaacaactggcggaaggagaagtcgccgggctcccgcccc
gtgctggaaatctactcggcggctggcctgcccctggccagcatcgtgtggaagagtggg
caggtggtgcagctgggctggacggccagcgaggacctgctgtgcattcaggaggacggc
tcggtgctcatctacaacctcttctgcgagttcaagcgccacttcagcatgggcaatgag
gtgctgcagaaccatgtgctggaggcccgggtcttccacaccgagtacggcactggcgtg
gccatcctcactggtgcccaccgcttctcccttgccaccaacatcgatgacctgaagctg
cgcaggatgcatgatgtcatgcccagtctgcagaagccgccctcctgctgggctgtgctg
ttccaggacagagtgactgtcatcctgctggccactggccaggagctgtacttgctggac
aacacctcctgcaatgcgatgacgccacctggactgagcccccaggcaggagcctacctg
cagatggccgtgtccttcaactaccgctacgtggcgctctacacggacactggctacatc
tggatgggcacagccacgttgaaggagaagctgggtgagttcagctgtgacatccacgcg
ccacccagagagatggtttggtgtgcgcggccccggagcaagcagcgggcagttgtggta
gcctgggaccggcggctcatggtggctgggaacaccgaagagtgcatccagtttgttctg
gacgaggactcctacctggtgcctgagctggatggcgtgaggattttctctcgcacctcg
cacgagttcttgcacgagatcccggaggccagccaggagatcttcaggatcgcctcgatg
gcgccaggcgccttgctgctggaagcccagaagcagtacgagaaagaaagccagaaggca
gacgagtacctgcgagagatcaaggacaaggagcagctctcggaggccgtacagcagtgc
atcgaggctgcaggctacgagcatgagcccgagacccagaagtccctgctcagggcagcc
tccttcggcaagtgcttcctcgaccggttctcccccgagagctttgtgcgcatgtgccag
gacctgcgggtgctcaatgccatccgggactaccagatcggcatccccctcacctttgcc
cagtacaagcagctcaccatcgaagtgctgctggacaggctcatcctccggagactctac
cctctggccatcaagatctgtgagtacctgcgcctttccgagatccagggcgtcagcagg
attctcgcccactgggcctgctacaaggtgcagcagaaggacaagtcggacgaggaggtg
gcccaggccatcaaccagaagctgggagacacccccggcatctcgtactcggagatcgct
ggccgtgcctacgagtgtggccgcaccgagctggccatcaagctcctggagtatgagccc
cggtcaggggagcaggtcccactgctgctgaagatgaagcggagcaagctggcgctgagc
aaagccatcgagagcggggacacggacctagtgtacacggtcgtgctgcacctgaagaac
gaactgaaccgtggcaacttcttcatgacgctgcagaaccagccagtggccctgagcctc
taccgccagttctgcaagcatcaggagagggagacgctcaaggacctgtacaaccaggac
gacaaccaccaggagctcggcaatttccacgtccacaccagctacgccaacgagaagcgg
atcgaggggcgggtggcagcactgcagaacgcggtggacgagtactacaaggccaagaat
gagtttgccgccaaagccacggaggatcagatcaagctgctgcggagccagcaccggcta
caggagggcttcggcccgccccccnnnnnnnnnnacaccatctcccacctcatcctggat
ggcaaacacaagcgggctgagcagctgtaccgggagttcaagatccctgacaagaggttc
tggtggctgaagataagcagcttggctgagtgcggcgactgggaggagatggagaagttc
tccaagagcaagaagtcacccatcgggtacctgcccttcgtggagatctgcgtgaagtac
cacaaccgccacgaggccaagaagtacgcggcccgtgtcacgcccgagcagagggtcaag
gccttcatcctggtgggagacctggaccaagccgctgacgccgccatcgagcacaagagc
gagagcgagatgagcctggtgctggccaagtgctcccctgccattgacgccactgtcgtg
gagaagctcaatcgcgcccgggcccaaatcctcaagaaatag
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integrated database retrieval system
