Alligator sinensis (Chinese alligator): 102377179
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Entry
102377179 CDS
T02922
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102377179 (CTCFL)
03036 Chromosome and associated proteins [BR:
asn03036
]
102377179 (CTCFL)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102377179 (CTCFL)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102377179 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
C2CH-3rd_BIRD-IDD
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-C2H2_15
zf-AtTam37
Motif
Other DBs
NCBI-GeneID:
102377179
NCBI-ProteinID:
XP_006024135
UniProt:
A0A1U7RUF1
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MRVSEGSGDLGVPGCRGSPSVFLCQVPPAMEAPPEPFTQSKGAARSPEGARQEAAGAGIS
RVGLGDQDGEGAGVASPAQVLLGGGEGRAGAAPAGEAGKHLLVLQTVHLQAGEEDEEKEA
EPQGGVRVVMQDEAPVVVVGEGVGVQQDVPPGVAISLQDGIYTFHDMELMQISVLQDAAP
GKSKESKSTEKFADVLLIKIDRSKEVLAVEGKVHQAPTAEELRGSELPALEGKKIQSCKP
DGGGSASHHDYKEEDATPSEEADIKYTETFRAQTNALQQKEAEKETFSCVLCTFTCLRMS
SLNRHMKIHSDEKPHLCHLCLRAFRTVTLLRNHMNTHTGTRPYKCSDCDMAFVTSGELAR
HRRYKHTLEKPFKCTLCKYCSVEASKLKRHIRSHTGERPYHCSLCSYASKDTYKLKRHMI
THSGEKPYQCYVCQARFTQSGTMKIHVLQKHSENVPRHQCPRCETVIARKSDLRVHLRNL
HSHLAVALKCSYCEAVFHERYALIQHKKTHRNEKKFKCDQCSYACKQERHLIVHKRIHTG
EKPFICLCCSKCFRQKQLLTVHFRKYHDSDFKPTVFECPKCGKSYSRWSNMHKHAETCGF
MRANTITSSKGSKGKKKRCRSLEHAKQEAVDQGSFQDVSIMNMEDCGTEIVPVTYGIEMT
TPREQKTEITCEMLFDTMDK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagggtctctgaaggcagtggggatttgggggtccctggatgcagggggtccccaagc
gtgttcctttgccaggtgccgccagcgatggaagcgccccccgagcccttcacccaaagc
aaaggggccgcaagatcccccgagggcgcgaggcaggaggccgcgggggccgggatctcc
cgcgtggggctgggcgaccaggacggggagggcgcgggggtcgcctccccagcccaggtg
ctgctgggaggcggggagggccgggcgggggccgcccctgcgggagaggctgggaagcac
ctgctcgtgctgcagaccgtgcacctgcaggccggggaggaggacgaggagaaggaggcc
gagccccagggcggggtgcgcgtggtgatgcaggacgaggcgcccgtggtcgtcgtggga
gagggggtcggcgtgcagcaggacgtacccccgggggtggccatcagcctccaggatggc
atttacacctttcacgacatggagctgatgcagatcagtgtcttgcaagacgcagcgccc
gggaagagcaaagaaagcaaatccacggagaagttcgcagacgtgctactgattaagatt
gatagaagtaaagaggtgcttgcagttgaagggaaggttcaccaggcacccacagctgag
gagttgagaggaagcgaacttcctgctctcgagggaaaaaagatccagagctgtaaaccc
gacggtggtggatcagcatcacaccatgactataaagaggaagatgcgactccatcagaa
gaagcagatataaagtatacagagactttcagagctcagacaaatgcacttcagcagaag
gaagcagaaaaggagactttcagttgtgtcctttgcacgttcacctgtctccgaatgtcg
agccttaaccgccacatgaaaatccattctgatgaaaaaccccacctgtgccatctctgc
ctaagggctttccgtacagttactctcctgcgtaaccacatgaacacacatacagggacc
aggccatataaatgcagtgactgtgacatggcatttgtgaccagcggtgagcttgcacga
cacaggcgttataagcatactctagaaaagccctttaagtgcacactgtgtaaatactgt
agtgtagaagcgagcaaattgaagcggcacatccgctcacacacaggagagcgtccttac
cactgctctctctgtagttatgctagtaaggatacctataagctgaaaagacacatgata
actcattcaggtgaaaaaccctatcagtgttatgtttgtcaggcaagattcactcaaagc
ggcaccatgaaaatccacgtattgcagaagcatagtgaaaacgtgccaagacatcagtgt
ccgcgttgtgagacagttattgcaaggaaaagtgacttacgtgtccacttacgaaacctg
cattcccacctggctgtggccttgaagtgcagttattgtgaagcagtcttccacgagcgc
tacgctctcattcagcacaagaaaactcacagaaatgagaagaaattcaaatgtgatcag
tgcagctacgcatgcaagcaggaacgacatttgatcgtgcataagcgcatccacactggc
gagaagcccttcatttgtctgtgttgcagcaaatgtttccgacagaagcagcttctgact
gttcatttcaggaaataccatgattccgattttaaaccaacagtttttgagtgtcctaag
tgtggcaagagctactcgcgctggagtaacatgcataagcatgctgaaacctgtggattt
atgagagcaaacactattacatccagcaaaggaagcaagggtaaaaagaagagatgtagg
agcctagaacatgctaagcaagaagctgttgatcagggctcattccaagatgtttccatt
atgaacatggaggattgtggcactgagattgttcctgtcacatatggcatagaaatgact
accccaagggagcagaaaacagaaattacatgtgaaatgctcttcgacacgatggacaaa
taa
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