Alligator sinensis (Chinese alligator): 102377202
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Entry
102377202 CDS
T02922
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102377202 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102377202 (ERCC6)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102377202 (ERCC6)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102377202 (ERCC6)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102377202 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
HDA2-3
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
102377202
NCBI-ProteinID:
XP_014378988
UniProt:
A0A1U8DCK7
LinkDB
All DBs
Position
Unknown
AA seq
1513 aa
AA seq
DB search
MSQTLSPARIMTFLMLSFVFEQMMPTETSHPPDSSQEEAAVAVVSDKNLNDSEETGIGQE
NELCDGDLEDSLGGALATENRPSTSMAPFFEVSRKKQPLLHIDRQQIQCVAHSAQTAELK
GLGVDVYDQDVLEQGVLQQVDNAINEASKTTKVADAEKEYQSVLDDLRSCVTSLKHINAI
IEQLTPQAAKSKDINRKLDSVKRQKYNKEQQLKKIKAKQKRLQAILGGEESFIEANNIEF
KADEEPGPSSLGSMLMPAQETEWEELIRTGHMTPFGTKVPQKPEKKPRRLMLTEASDFEK
YLADQAKLSSERKRLSFKKRAKKKAQSKNIQCAMPTLTLKGKNGKTRPLSTTDKCVKKRL
KKLQNHALQIHSKSGVPKEKRPLEAKGKMGVHDGDDSENSDYVPDEELFNPEEEEQEEEA
LFYADDDSDYELKTLLRQRKSLKKDLKEEAEDDDFFPSSEEEEEENKIGKRRIKRCKDDG
DEDCYKQRLRRWNKQRLKDKEEHRMAEEDSDESDAEFEEGFRVPGFLFKKLFKYQQTGVR
WLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYKGLGPTIIVCPTT
VMHQWVKEFHTWWPPFRVAVLHETGSYTNKKVKLIHEIAGCHGILITSYSYIRLMQDNIH
SYDWHYIILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPVQNNLKELWSLFDFVFPGK
LGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSL
PDKNEQVLFCRLTAEQRQVYQKFIDSKEVYQILNGEMQIFSGLVGLRKICNHPDLFSGGP
KVLKSVPDNEIDEVDQFGYWKRSGKMIVVESLLKIWHKQGHRVLLFTQSRQMLHVLEAFL
RDRNYSYLKMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGINLTGADRVIIYDPD
WNPSTDTQARERAWRIGQTKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRF
FKSNDLYELFTLSSPDGSQGTETSAIFAGTGSDVQAPKRQSKRKFAKPPDNASESGLHLK
GHISSKYSKPSCSPSTGHLTNSSEGVEAVGKTKGNSDTFNPNYATEGDSQVLHNMDSLVN
GEDKSLDTVDRSVLQPLPGNAGTPENLGLISEVHGAPGVSIERGTDCSQEKQKADFEVGQ
LGSNHCKCTSKTKHSVDMLAHEGCKNNQKKSKNKKDAKFEGERISHLVKKKQYRKEDNEE
KEDDQKKNDDYVLEKLFKKSGVHSVMKHDVIMEASSPDYVLMEAEANRVAQDALRALKIS
RQRCLGAAFGVPTWTGSSGLSGAPSGIKSRFGQKKNPMLQDPSPGKKCKEVDNIKKENIK
KSISSMHFDGKTEAGESSSSVLDSSSLLAKMRARNHLILPQRTENEGVENHRQASAPLPA
STEHDDLLVDVRNFIAFQACVDGQASTREILEAFESKLSSAQSCVFRELLRNLCIFHRSP
NGEGIWKLKPEFR
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacattgagtccagcgagaataatgacattcttaatgttgtcgtttgtattt
gagcagatgatgccaacagagactagccaccccccagacagtagccaagaagaggctgca
gtggctgttgtgagtgataagaatctaaacgactctgaggaaacggggattggacaagaa
aatgagttgtgcgatggtgacttggaggacagtcttggaggagctcttgctacggagaac
aggccatccacatctatggctcctttttttgaggtgtcgaggaaaaaacaaccactgtta
catattgacagacagcagatccagtgtgttgcacacagtgctcaaactgctgagctgaaa
ggtttgggagttgatgtttatgatcaagatgtattggaacaaggagtccttcagcaggtt
gataatgcaattaatgaagctagcaagacaacaaaagtagctgatgcagagaaggaatat
cagtcagttcttgatgacttacggtcatgtgtaacatctttgaaacacatcaatgcaatt
attgagcaacttaccccacaagctgcaaaaagcaaagatataaacagaaaactagattcc
gtaaaacggcaaaagtataacaaggaacaacagctaaagaaaatcaaagcaaaacagaag
cgtctccaggcaattcttggtggagaagagagtttcattgaagcaaacaatattgaattt
aaggctgatgaagagcctggtccatcatcccttggcagtatgcttatgccagctcaggaa
acagaatgggaggagcttattcgcactggccacatgaccccttttgggactaaagtccct
caaaagccagaaaagaagccacgcaggctaatgctaactgaagcatctgattttgagaag
tacttagcagatcaagctaaattgtcatctgaaaggaagaggctatcttttaagaaaaga
gcaaagaagaaagcacagtctaagaacattcagtgtgcaatgcccacattaaccctaaag
gggaaaaatggcaaaactagacccctctcaacaacagacaagtgtgtgaaaaagcgtttg
aagaaacttcagaaccatgctcttcagatccattccaagtcaggagtcccaaaggaaaag
agacctcttgaggccaaggggaagatgggagttcatgatggggatgatagtgaaaattca
gattatgtgccagatgaggagcttttcaaccctgaagaggaagagcaggaggaagaggca
cttttttatgctgatgatgattctgattatgaactgaagactttgttaagacaaagaaaa
tctttgaagaaagacctaaaggaagaagctgaagatgatgatttcttcccaagttcagag
gaagaggaagaagagaacaaaataggaaaacgcagaataaaaagatgcaaagatgatgga
gatgaagattgctataaacaaaggctaaggaggtggaataaacagcgattgaaggacaaa
gaggaacatcggatggcagaagaagattcagatgaaagtgatgctgaatttgaagagggt
ttcagagtaccaggattcctctttaaaaagctttttaagtaccagcagacaggtgttagg
tggctctgggaattgcactgccagcaggcaggaggaattctgggagatgaaatgggattg
ggcaagaccatccagataattgccttcttggcaggtctgagctacagcaagatcaggact
cgtggttcaaattacagatacaaggggttgggcccaacaataattgtttgtccaacgaca
gtaatgcaccagtgggtgaaagaattccacacatggtggcctccctttagagttgcagtt
cttcatgaaactggctcttataccaacaaaaaggtgaaactaattcatgaaattgctgga
tgccatggcattctgattacctcctattcctacattcggctgatgcaggataacatccac
agctatgattggcattatataattttagatgaaggtcataaaattaggaatccaaatgct
gccattacacttgcatgcaaacagttccgcactccccatcgaatcatcttgtctggctcc
cctgtgcaaaataacctaaaggagctctggtccctctttgactttgtattcccaggaaaa
ttgggaacgctgcccgtcttcatggaacaattttctgtcccaataaccatgggaggatat
tccaatgcctctcctgtgcaggtaaaaactgcctacaagtgtgcatgtgttttacgggac
accataaatccctacttgctgcggagaatgaaggctgatgtgaaaatgagcctttcgtta
ccagataaaaatgaacaggtcttgttttgccgtttgacagctgagcaacgtcaagtctat
caaaagttcattgactccaaagaagtttaccagatcctcaatggagaaatgcagattttc
tctggacttgtaggattgagaaagatctgcaatcatcctgatcttttctctggtggcccc
aaggtcttgaaaagtgtaccagataatgagatagatgaagtggatcagtttggatattgg
aaacgttctggaaaaatgatagtggtagagtcactgctgaaaatatggcataagcagggt
cacagagtgctgctgtttactcagtcaagacagatgctacacgtccttgaagcatttttg
agagacagaaactattcctacctcaagatggatggtactacaacaatcgcatccagacag
cctcttataacaagatataatgaggataaatccatatttatttttcttcttacaactcga
gttggtggcattggaatcaacctgacaggtgctgacagggttattatctatgatcctgac
tggaatcccagtacagacacacaggctcgagagcgtgcttggagaataggccagacgaaa
caggtgactgtgtacaggcttcttactgcaggtacaatagaagagaagatttaccacaga
caaatcttcaaacagtttttaacaaacagagtgttgaaagatccaaaacaaaggcgattt
ttcaaatccaatgatctttatgaacttttcactctgagcagcccagatgggtctcaagga
acagaaactagtgctatttttgcaggtactgggtcagatgttcaagctccaaaacgtcaa
tcaaaacgaaaatttgcaaagccacctgataacgcttctgaaagtggtctccatcttaaa
ggacacatttcatctaaatacagcaagccctcatgttccccctcaacaggacatctaact
aattcctctgaaggagttgaggcagttggcaaaaccaaaggaaactctgatacttttaac
ccaaattatgctacagaaggtgactcacaagtacttcataatatggattcattggttaac
ggtgaagacaagagtttagacacagttgacaggtctgtgttacagccactcccagggaat
gctgggactccagagaaccttggattaattagtgaagttcatggagcacctggtgtaagt
attgagaggggaaccgactgctcacaggaaaagcagaaagcagattttgaagttggacag
ttaggtagtaatcattgtaaatgcacctcaaaaacaaaacacagcgtagatatgctggca
catgagggctgcaagaataaccaaaagaagtcaaaaaataaaaaagatgccaaatttgaa
ggggaacgtatctcacatctagtaaaaaaaaaacaatacaggaaagaggacaatgaagag
aaggaggatgatcaaaagaagaatgatgattatgtcttggagaaacttttcaaaaagtca
ggagtacacagtgttatgaagcatgatgttattatggaagcttccagtccagattacgtg
ttaatggaagccgaagcaaaccgagtggcccaggatgccttaagagccttaaagatctcc
cgacagcgatgtttaggagcagcttttggtgtgccaacctggacaggcagcagtggtcta
tctggtgccccatcaggaataaagagtaggtttggccaaaagaaaaatcctatgctacaa
gacccatctcctggaaagaaatgcaaggaggttgataatataaagaaagagaatataaag
aagagcatttccagcatgcattttgatgggaaaacggaagcaggagagtcatcatctagt
gtactagattcatcatctttgttagctaagatgagggctaggaaccaccttatattacct
cagaggacagagaatgaaggcgttgagaatcatcggcaagcttctgctcctcttccagcc
tcaacagagcatgatgacttgctagtggatgttcgaaactttattgcattccaggcttgt
gtagatggacaagccagtactcgggagatactggaggcatttgagtccaagttatcatca
gcacagtcttgtgtctttcgagaacttctgagaaatctttgtattttccacagaagtcca
aatggtgaaggtatttggaaactaaagccagaattccgctga
DBGET
integrated database retrieval system
