Alligator sinensis (Chinese alligator): 102377256
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Entry
102377256 CDS
T02922
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102377256 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asn03041
]
102377256 (PRPF4)
Spliceosome [BR:
asn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102377256 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
102377256
NCBI-ProteinID:
XP_006022719
UniProt:
A0A1U7RFJ0
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MPRAATRNQLGEDSPVLRRVPAAAGVAVTMASARGPAVRATKTKISDESDAPPVKRPHIF
YGSLEEKERERIAKGELGLLGKDGMKAAIQAGNINISSGEVFDLEDHMSERQAEVLAEFE
RRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKD
DDKSKKAKEEYQQTWYHEGPSSLKTARLWIANYSLPRAVKRLEEARLLKEIPEATRTSQR
QELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKLLATACWSGLCKLWSVPDCSLVHTLRG
HNTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHTMRVARVMW
HPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHMDGSLAGTGGLDAFGRV
WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRKCIYTIPAHQNL
VTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLMATCS
YDRTFKLWMAE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgcggcaacccggaaccagttgggtgaagacagccccgtattgcggagagtc
cctgcagcggccggtgttgccgtcaccatggcgtccgcgcggggccctgcggtgcgggca
acaaaaaccaagatctcagacgagagtgatgctcccccagtcaagagacctcatatcttc
tatggaagtttggaggagaaggaaagggagcgtattgccaaaggggagctggggctgcta
ggaaaagatgggatgaaagctgcaattcaggctggcaacattaacattagcagtggtgag
gtcttcgatcttgaagaccatatgagtgagcgccaggcagaagtgttggctgaatttgag
cgcaggaagcgtgctaggcaaatcaatgtttccaccgatgactctgaagtcaaggcctgc
ttacgagctcttggggagcccatcacactctttggagaagggcctgcagaaagaagagaa
agattgagaaatatcctctcagtggttggcactgatgccttaaaaaaaacgaagaaagat
gacgacaagtctaagaaagccaaagaagagtatcagcaaacctggtaccatgaagggcca
agcagtctgaaaacagctagattgtggatcgccaactactcactccccagggcagtgaag
cggttggaagaagcccgactgctcaaagaaattcccgaggctacgaggacatcccagagg
caagaactgcacaagtccctaaggtcattgaataatttctgcagtcagattggagatgat
cgccccatctcttactgccatttcagtcccaattccaaactcctggctactgcttgttgg
agtgggctgtgcaaactctggtctgtgcctgactgcagtctcgttcacactttacgaggg
cacaacaccaatgtgggagcaattgtattccatcccaaagctactgtctccttggacaag
aaggatgtcaacttggcctcatgtgcagctgatggttctgtcaaactctggagccttgaa
agcgatgagccggtggcagatattgaaggtcacaccatgagagtggcacgagtgatgtgg
catccctctgggaggttcctgggcaccacttgctatgatcactcctggcgcctgtgggac
ctggaagctcaggaagagattcttcatcaggaagggcacagtaaaggggtctatgacatt
gctttccacatggatggatctctcgctgggactggtggccttgatgcctttggccgggtg
tgggacttgcgcaccggacgctgtatcatgttcttggagggtcacctgaaagagatctat
gggatcaacttctcaccaaatggataccacatagcaactggcagtggagacaacacttgc
aaggtgtgggacctccgccagaggaagtgcatttacactatacctgcccaccagaaccta
gtgacaggggtgaagtttgaacccaatcatgggaacttcctgctcacaggcgcctatgat
aacacagcaaaaatctggacccatccaggctggtccccattgaaaacactggctggccac
gaaggaaaagtaatgggactggatatctccttagatgggcagctcatggcaacatgctcg
tatgataggaccttcaagctgtggatggcggagtag
DBGET
integrated database retrieval system
