KEGG   Alligator sinensis (Chinese alligator): 102377768
Entry
102377768         CDS       T02922                                 
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102377768 (SMARCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asn03021]
    102377768 (SMARCC2)
   03036 Chromosome and associated proteins [BR:asn03036]
    102377768 (SMARCC2)
Transcription machinery [BR:asn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102377768 (SMARCC2)
Chromosome and associated proteins [BR:asn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102377768 (SMARCC2)
   PBAF complex
    102377768 (SMARCC2)
   GBAF(ncBAF) complex
    102377768 (SMARCC2)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 CD99L2
Other DBs
NCBI-GeneID: 102377768
NCBI-ProteinID: XP_025047157
UniProt: A0A3Q0FIT2
LinkDB
Position
Unknown
AA seq 925 aa
MAVRKKDGGPNVKYFEAADTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGCGHRHSAPPLPICPP
SYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVSDEKSPVVRRK
RISAKTLTDEVPASPGRVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTP
YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ
EDESMETAGKDEEESGAGNKGDQAKNPELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIER
RALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAF
LEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQTDGDVKTGRK
GKEIEDLVTETVKGKPELQTTASQQLLSFPEKGKEKPADMQNFGLRTDMYTKKNIPSKSK
AAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDS
EASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPTALV
EAHVRKVEEAAKVTGKADPAFGLESSGIAGTAADEPERVEESSGDEARGEAQAVEDKKDM
KDPRDGGVDEELKEKLSEAPKKEEDKGKEGDGEKDVEKGDGDSLADVEKDKEPKEGLDEG
PKELGEAEGERKTKVERDIGEGNLSTAAHLAAVEERKIKSLVALLVETQMKKLEIKLRHF
EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQLHQQPPAPPPALA
PGAPALPAPGAPLAPATHAMTSAPA
NT seq 2775 nt   +upstreamnt  +downstreamnt
atggcggtgcggaagaaggacggcggccccaacgtcaagtacttcgaggccgcggacacg
gtggcgcagttcgacaacgtgcggctctggctgggcaagaactacaagaagtacatccag
gccgagccgcccaccaacaagtccctgtccagcctggtggtgcagctgctgcagttccag
gaggaggtgtttggcaagcacgtcagcaacgcgccgctcaccaagctgcccataaagtgc
ttcttggacttcaaggcaggcggtgccctgtgccacatccttgctgccgcctacaaattc
aagagcgaccaaggatgtggccacagacactcagcccccccactccccatctgccccccc
agctacgacacctggatcccggccagcgagattgaagcctccgtggaagacgcgcccacc
ccagagaagccccggaaggtccacgccaagtggatcctggacaccgacaccttcaacgag
tggatgaacgaagaggattacgaggtgagcgacgagaagagccccgtggtgcggcgcaag
aggatctctgccaagaccctcaccgacgaggtaccagcttcgcccgggcgggtgaacagc
cccgattcagaccggcgggacaagaaaggtggcaactacaagaagcggaaacgctcgccc
tcaccctcacctacccctgaggccaagaagaagaacgccaaaaaaggcccctcgactccc
tacaccaagtcgaagcgcgggcaccgggaggaggagcaggaggatctgaccaaggacatg
gatgagccatcgcctgtgcccaacgtggaggaggtcacgctgcccaagacagtgaacacc
aagaaggactcagagtcagcgccagtcaaggggggcaccatgacggaccttgatgagcag
gaagacgagagcatggagactgcaggcaaggacgaggaagagagcggcgcagggaacaag
ggcgaccaggccaagaaccccgagctgcacgaggacaacgtgacggagcagacgcaccac
atcatcatccccagctacgctgcctggttcgactacaacagcgtccacgccatcgagcgc
cgcgccctgcctgagttcttcaacggcaagaacaaatccaagaccccagagatatacctg
gcctaccgcaacttcatgatcgacacataccggctcaacccgcaggagtacctcacctcc
accgcctgccgccgcaacctggctggcgacgtctgcgccatcatgcgagtccacgccttc
ctggagcagtggggcctcatcaactaccaggtggatgccgagagccgccccacgcccatg
ggccccccaccgacctcccacttccacgtcctggctgacaccccctcagggctggtgccg
ctgcagcccaagaccccccagggccgccagactgatggtgacgtgaagacggggcgcaaa
ggcaaggaaatcgaggacctggtcacggagacggtgaaggggaaaccggagctgcaaacc
acggcctcgcagcagctgctgagcttccccgaaaagggcaaggagaagccggccgacatg
cagaacttcgggctgcgcacagacatgtataccaagaagaacatcccctccaagagcaag
gctgcggccagcgccacgcgggaatggacagagcaggagacattgctgctgctggaggcg
ctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagccggacgcag
gacgagtgcatcctgcatttcctgcgcctgcccatcgaggacccctacctggaggactcg
gaggcctcgctcgggcctctggcctaccagcccatccccttcagtcagtcgggcaacccc
gtcatgagcaccgtggccttcctggcttctgtggtcgacccccgcgtggcctccgccgcc
gccaagtcagctctggaggagttctcgcggatgaaggaggaggtgcccacagcgctggtg
gaagcccacgtgcgcaaggtggaggaggccgccaaggtgacgggcaaggccgacccggcc
ttcggcctggagagcagtgggatcgcaggcaccgcggccgacgagcctgagcgcgtggag
gagagcagcggtgatgaggcccggggagaggcgcaggcggtggaggacaagaaagatatg
aaggatcctcgggacggcggcgtggatgaggagctgaaagagaagctgagtgaggcaccc
aagaaggaggaggacaagggcaaggagggtgatggcgagaaggatgtggagaagggtgac
ggagacagcttggctgatgtggagaaggacaaggagcccaaggagggcctggatgagggg
cccaaggagctgggtgaggccgagggcgagaggaagaccaaggtggagcgcgacattggg
gagggcaacctgtccactgctgctcacctggcagcagtggaggagcgtaagatcaagtct
ctggtggcactgctggtggagacacagatgaagaagctggagatcaagctgcggcacttt
gaggagcttgagaccatcatggaccgggagcgtgaggcgctggagtaccagcgccagcag
ctgctggcagaccggcaagccttccacatggagcagctgaagtacgcagagatgcgggca
cgccagcagcacttccagcagctgcaccagcagccccctgcgccacccccggccctggcc
cccggcgcccctgccctgcctgcacccggcgcccccctggcacccgccacccacgccatg
accagcgccccagcc

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