Alligator sinensis (Chinese alligator): 102378259
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Entry
102378259 CDS
T02922
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asn03016
]
102378259 (TARBP1)
03036 Chromosome and associated proteins [BR:
asn03036
]
102378259 (TARBP1)
Enzymes [BR:
asn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
102378259 (TARBP1)
Transfer RNA biogenesis [BR:
asn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102378259 (TARBP1)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102378259 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
102378259
NCBI-ProteinID:
XP_014379351
UniProt:
A0A1U8DGC2
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSYFQLEPSLFWWSAEENEKLVQFWENFILIMETLEGNQIHVIKPILPKLNRLYELSLSG
KKGCWLFHPSWHMCIYKRMFESENKTITKEGVVHFLELHEAKCIPDSPGFSEFIIGPLMD
ALSESSLYSRSPGQLIGACPPIGIKLQKFLVAYLTLLPEEEKSSFLLKFIQKMTSRHWCA
VPILFLSMALACIPACKALGTEGLHALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDV
EKVSLPEVSSFLACLRPEESLRRGTILWVELCSWLCTNDGHFRKSIKCDLEHQERSSLST
YVLTLVEDYLKTPPSGRESCFMPDWFEAKLVATVILLAADVEEMKNKHSEKINTKWIELK
AFLYPLLDVLLKLGTNVYIPTLKADKSLQLLLKLLQTCSLKCSNPQDDGVLTFLWKCVET
SVDSVLDFVLRRLTTGDLNTVSDLDRCNLYLALVSELVNLSLNIGWKKGLSIWNFISSLT
NASIHSLQEASSEQEPKLEEQIQKVVSMASLTVVCEIIDQKPELQLESLQPVETLKRFIS
SAQLNQVLKKPSSIEEKSSLFEESTSCQGWGKTVACYIHDQWVCLHFLLKKYQNHIPQSE
DETLELSLPAVQRPRRTFQSALEALTVLPSEQVLPVFHCMKVLIPKLLVSSETLCIEAFD
LGWKIISSLSNTQLIFWSNLKAFVQVVFDTEVLAVAASSKGQAYAKIRQMISRLVEMSTT
RTGVFNTVLSYCCQSWVLSTSDDTHISENPFLNAGEYSELLMEACIFGTVFRRDQRLIQD
VHAFVENLGDKCAANVVTESTNRDEHYVRICVIKFLCLLDESNNLHKMFVEDIVTKLLDK
DELVSKTRTRYYANSLQHRVKNRLWQTLLVLLPKLDQNFLTETLDKILQAGFENNQASVK
YLIEWIIILILHKYPQFLSKFWDCFCYDEEKLKTSICTFLSVLSHFDIILQNTSEKKPVL
KKALIVVLQWCFNHNFSVRLYALIALKKIWGMCKTLHVEEFEALTPVIESSLHQVENMHG
TGNAKRNWQRIQEHFFFATFHPLKDYSLETIFYTLPRLSELVEDEWISLCKFTRFTSIPL
PSTYQWYHSRAELLDLKPSDWSQQDKGSNSVEMDNQTEWTDVQKKIIPWKNSIPDLDLEL
VFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALIVGSLRYIHDKQFQQL
SVSAEQWLPLLEVKPSQLVEYLQQKKMEGYTIIGVEQTAKSSDLTEYCFPEKSLLLLGNE
HEGIPVNLIQLLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQMIKQKQLK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattttcaattagaaccgagtcttttctggtggtctgctgaggagaatgaaaaa
cttgtgcaattttgggaaaatttcattttaataatggaaaccttagaaggaaatcagatc
catgttataaagccaatcttgccaaagttaaaccgtttatatgaattgtcattatcggga
aaaaaaggctgttggttgtttcacccttcatggcatatgtgtatttataaaagaatgttt
gagagtgaaaacaaaacaataacaaaggaaggagtcgttcactttttggagcttcatgag
gccaaatgcattccagattcaccagggttttcagagtttattatcgggccattaatggat
gcactttcagaaagctctctctatagcagatcaccagggcaattgataggagcctgtcct
cccataggaataaaattacagaagtttttggttgcgtacctcacactccttccagaagaa
gaaaaaagcagttttctgttaaaatttattcagaagatgacaagcagacattggtgtgct
gttcccattttgttcctatctatggcactggcatgtatcccagcatgtaaagcattggga
acggaaggacttcatgcactaagagatgtcctgcagtgtactatgatcacacaccaaatt
ctcttacggggagctgctcagtgctatcttcttcaaacagctatgaacttagtagatgtg
gagaaagtgtcacttccagaagtttcaagtttccttgcgtgtcttagaccagaggaatcc
ttaaggagggggacgatactgtgggtggagctttgcagttggctgtgcactaatgacggc
cacttcagaaagtccataaaatgtgatcttgagcatcaagagagatcatcattaagtaca
tatgtacttactcttgttgaagattaccttaagacaccaccatctggaagggaaagttgc
tttatgcctgactggtttgaagctaaacttgttgctacagtgattctgctggctgcagat
gtagaggaaatgaagaataaacacagtgaaaaaatcaacacaaaatggattgaattgaag
gctttcttgtaccctcttctggatgttttgctgaaacttggcactaatgtttatatacca
acactgaaagctgataaaagcctacaactgctgttgaagttattacagacctgttcgtta
aaatgttctaatccacaggatgatggggtattaacttttctctggaagtgtgttgagact
tctgtagacagtgttttggattttgttctccgaaggcttactacaggtgatttaaacact
gtttcagatttggatcgttgtaatttatacttggctttagtatcagagctggtaaattta
tcattgaacattggttggaaaaagggactatccatctggaatttcatctcttctttgaca
aatgcctctattcatagtctgcaggaggcaagcagtgaacaggaaccaaaacttgaagaa
cagattcagaaggtagttagtatggcatcactaactgtggtgtgtgagattattgatcag
aaacccgaactgcaacttgaatctctgcaacctgttgagaccctaaaaagatttatttct
tctgctcaacttaatcaggtattaaagaagccatcttctattgaagaaaaaagtagttta
tttgaagaatcaacttcttgtcaaggatgggggaagacagttgcctgctacatacatgat
cagtgggtttgccttcattttcttttaaaaaagtatcagaaccatataccacaatcagaa
gatgagactttggaattatctttgcctgcagttcagagaccaagaagaactttccagtct
gctttggaagctctaactgttcttccttctgagcaggttttacctgtgtttcattgcatg
aaagtacttattcccaagcttctggtttcatctgagacactctgcattgaggcatttgat
ctgggttggaaaattatatcctctctgagcaacacacagctaatattttggtctaattta
aaagcctttgttcaagttgtttttgatactgaggttcttgctgttgcagcaagtagcaaa
ggtcaagcatatgcaaaaataagacagatgataagcagactagttgaaatgtccactaca
aggacgggagtctttaatacagtacttagctattgctgtcagtcttgggtactttctact
tctgatgacacacacatttcagagaatcccttcttgaatgctggagaatacagtgaactt
cttatggaggcttgtatctttggaactgtattccggcgagatcaaagacttattcaggat
gtacatgcctttgtagaaaatcttggagataaatgtgcagcaaatgttgtcacagaaagt
acaaacagagatgagcattatgtgcgaatttgtgtcatcaaattcctgtgcttgttggat
gaatcaaataacttgcacaagatgtttgtagaagacattgtcaccaaactccttgataaa
gatgaactggtatccaaaactagaacacgttattatgcaaactctttacagcacagagtt
aaaaaccggttgtggcagacactgttggttcttttaccaaagctagatcagaattttttg
actgagactcttgacaagattcttcaagctggatttgagaacaatcaagcatctgtaaaa
tacttgatagaatggattatcatcttgattctacacaaataccctcagttcctttcaaaa
ttctgggattgtttttgctatgatgaagaaaagcttaaaactagcatctgtacattttta
tcagtgttgtcgcacttcgatattattcttcaaaatacctcggagaagaaaccagttctg
aaaaaggcccttattgttgttctacagtggtgtttcaaccacaatttcagtgttcggctt
tatgcattaatagctcttaagaagatctggggcatgtgcaaaacactgcatgtagaagaa
tttgaggcattaacaccagtaattgaatctagtctccatcaagtggaaaacatgcatggc
acagggaatgctaaaaggaattggcaacgaatccaagaacatttcttttttgcaacattt
catccacttaaggattacagtctagagacgatattttacacccttccacgcctttcagaa
cttgttgaagatgagtggatctcactttgtaaatttaccagattcactagcattcctttg
ccatcaacatatcagtggtatcattctcgagctgaacttcttgacctaaagccaagtgac
tggtctcagcaagacaagggttcaaattcagttgaaatggataaccaaacagaatggact
gatgttcagaaaaagattatcccttggaaaaatagcattcctgatttagacctggaactg
gtatttcaggaccgtgctgctaaacttggtaaatcaaacagtagactgattgtagtggct
tcacttattgataaacccacaaatttaggaggcttgtgtcgtacaagtgaaatatttggg
gcatctgctctaattgttggcagccttcgttatatacatgataaacagtttcagcagctc
agtgtttctgcggaacagtggcttccccttcttgaggtgaaaccatctcagcttgtagag
tatttacagcagaaaaagatggaaggctacactatcataggggtggagcagacagccaaa
agttctgacctgacagaatattgctttccagagaaatccttgttattgctgggaaatgaa
catgaaggaatcccagtaaacctgattcagcttctggatgtgtgtgtggaaattcctcaa
cagggtatcattcgctcactcaatgttcatgtaagtggagctctgctgatttgggaatat
acaagacaacaaatgatcaagcagaaacaactgaaatag
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integrated database retrieval system
