Alligator sinensis (Chinese alligator): 102378697
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Entry
102378697 CDS
T02922
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asn04121
]
102378697 (SHPRH)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102378697 (SHPRH)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102378697 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
PHD
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
102378697
NCBI-ProteinID:
XP_006024296
UniProt:
A0A1U7S4K5
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MSSRRKRSLPSRVDEEKKKQLCWNMHEDRRNEVMTDDTNEDDSVPAPSTSSSSFIVINDD
SIDEELTPSENSGSKLVSFSTITDGEDFCSNFTPLSIQLNIMVSPYCADSSWKALLGEFA
LELLPEHILIDKIHERSFSLIRTDSGGQLKICVDAKNGEDDSDKDKEDLNDYEQAILVES
SLSSEILEGLRWLQKKRVIGLYQRPEEDQALKVGIYLLETGLSKLEFLSDAGGRPKKANH
LIQKLMEEFYSFRIPDVLEEDEEESDRELERQNIEELYDFVRHTHQQESQLLREDVQHPA
LIPILRPYQSEAVNWMLQRENFRSTSTNENTLHFLWREVITLDGVKIYYNPFIGCIIREY
PVAGPQWPGGILADEMGLGKTVEVLALILTHTRQDIKQDALTLPEGKLVNFFVPPQPNEG
SKKKRAKKIELKLKEKIQYPSLRVMILTAVKEMNVKKGASIIAIFKYISAIYKYDIQRNR
RLLKRTLEKLIADQVVEQVKGHGLAGSFKLGKNYKEQKRREKNKEQVTKSSERIQKKCLP
DAKTQTKDLASRKAATENVLKSPQFGNITPEEHDYCTTTRNNRKSETGHKTCIKEQNSPK
VIDLESDLRGNLLVSSDTTNSTVISMPKKSDDDEVQQDFSEGQCSGSQDQVSSGVQHASS
VYPFNTSDYRFECICGELGLVDYKARVQCLKCHLWQHAECVNYKEENLKFKPFYCPHCLV
AMKPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEIV
ITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTT
AKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRKN
PQPLYSLVAKIMWRSAKKDVIDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALVK
LRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSL
QKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQR
LHSTHNLMELLVAKHPGIPPTLRDSRLEEEAKQLRQHYMSKSNAEVAEAHQALQPVLQTI
RELQRKIHSGSPWWLDAIQTAIQYAIDEELVQRVQNEITSNYKQQTNKLSMADKFRDCRG
LQYLLTSQLEEVKKFQKLVREAVKNLEGPPSKEVIEAATICHLRPVRLPLNNCVFCKADE
LFTDYESKLFSHTVKGQMAIFEEMIEDEEGLVDDRLPTTSRGLWAASETERALKAILSFA
KAHRLDAKLTEEGNTFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPD
EPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVN
PEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEIS
YVFTAETANQEDDIPVKGSHSTKVEAVVRTLKKIQCKDPGAKSLVFSTWQDVLDIISKAL
YDNNMVFAQINGISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQMMLKTVERSHTSSSMKQSEASVLTV
ADLADLFTEETEELE
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgacgaaaacgttcgctgccctccagggtagatgaggagaaaaagaagcag
ctctgctggaatatgcatgaagatcgaaggaatgaggtgatgactgatgacacgaatgaa
gatgactctgttccagctcccagcacgtcttcttcatccttcattgttataaatgatgat
agcattgatgaagaactgactcccagcgaaaacagtggttcaaagttggtgagcttctcg
actattacagatggagaagatttctgctccaactttacccctttatccatacagctcaat
attatggtctcaccttattgtgcagacagttcctggaaagctttacttggagagtttgct
cttgagctgcttcctgaacacattttgattgataagatccatgaaaggagtttctctttg
attagaacagattctggtggtcagctgaagatctgtgttgatgcaaaaaatggagaagat
gacagtgataaagataaagaagacctgaatgattatgaacaagccattctggtggaatca
tctttaagtagtgaaatattagaaggtttgaggtggttgcaaaagaagagggtaattgga
ctttatcaaaggcctgaggaggatcaggctttaaaggttggtatttaccttctggaaact
ggtttaagcaaactagagtttctcagtgatgcaggtggaagaccaaaaaaagctaaccac
ctgattcagaaactgatggaagagttctacagttttagaattccagatgtgctggaggaa
gatgaggaagaatctgatagagaactagagcgacagaatattgaagagctgtatgacttt
gtgaggcatacacatcagcaggaaagtcagttgttgagggaggatgtacagcaccctgca
cttattcccatattgaggccataccaaagtgaggctgtgaactggatgctgcaacgggag
aatttcagaagcacctctaccaatgaaaatactcttcactttttatggcgagaggtcatc
actctagatggagtgaaaatctactataatccatttattggctgcattatccgtgaatat
ccagttgctgggcctcagtggcctggaggaattctggctgatgaaatgggtcttgggaag
acagtagaagtactggctcttattctgacacacacacgacaagatattaaacaggatgct
ctaaccttacctgagggtaaactagtgaacttctttgttccaccccaacctaatgaagga
agcaaaaagaaaagagcaaagaaaatagagcttaaattgaaggaaaaaatacagtatccc
agtttacgagtgatgatattaacagctgtgaaagaaatgaatgtgaagaagggagcttcc
atcattgcaatatttaagtatattagtgccatatacaagtatgacatacagagaaatcga
aggcttcttaaaaggactttggagaaactaattgcagaccaagtagtagaacaggtcaaa
ggccatggattggctggatcttttaagttagggaagaattacaaggaacagaaaaggcga
gaaaaaaacaaagagcaggtaacaaagagttctgaaaggattcagaagaaatgtttgcct
gatgctaaaactcaaaccaaagatttggcaagtaggaaagcagccactgaaaatgtcctt
aaatcaccacagtttgggaacatcactccagaggagcatgactattgtacaactaccaga
aataatagaaagtctgagacgggtcataaaacctgcatcaaagaacaaaattctccaaaa
gttatagacctagagtctgacttgcgaggaaacctccttgtgtccagtgacaccaccaat
tctactgttattagtatgcctaaaaaatcagacgatgatgaagtccagcaagatttctcg
gagggccagtgctcaggctcccaagaccaagtcagcagtggtgtacagcatgccagttct
gtatatccattcaatacttctgactaccgttttgaatgcatttgtggtgaacttgggttg
gttgattataaggcccgtgtgcagtgcctgaagtgccacctgtggcaacatgctgagtgt
gtaaactacaaagaagaaaacttgaagttcaagcctttttactgtcctcattgcttagta
gcaatgaaaccagtttccacaggagcaactctgataatctctccaagttctatctgtcat
cagtgggtggatgagatcaacaggcatgtgagatcatcttcccttcgagtcctggtatat
caaggtgtgaagaaacacggattcttgcagcctcatatgttggcagaacaggaaatagtc
atcaccacatatgatgtcctacgcactgaacttaactatgtggacatccctcacagcaac
agtgaagatggacgccgtttcaggaaccagaagaggtatatggccatcccaagcccctta
gtagcggtggagtggtggaggatatgcctagatgaagcacagatggttgaatgcactaca
gcaaaggctgctgaaatggcacttcgtttgagtggaatcaaccgctggtgtgtcagcggc
actcctgtgcaacgaggattagaagatctatatgggttagttctttttcttggagttgat
ccttactgggtcaaacattggtgggatcagcttttgtatcgaccttactgtaggaaaaat
cctcagcctctctacagcctcgttgccaagataatgtggaggtcagcaaagaaggacgtg
attgaccaaattcaaataccccctcagacagagaatgttcactggcttcacttttctcct
gtggagagacacttctatcatcgccagcatgaggtgtgctgccaggatgcgttggtaaaa
ctccgcaaaatttctgattggactcttaagcttagcagtttggatagaaggacagtcact
tccattttgtaccctttgttgcggctgagacaggcttgctgtcatccacaggctgtccgt
ggggaattcttgccattacagaaaagcactatgaccatggaggaactactaacatcgctg
cagaagaaatgtcgaacagagtgcgaggaagcgcatcgacaactagtgtgtgcccttaat
ggcttagccggtatccatatcattaaaggtgaatatgcgttggctgcagagctgtacaga
gaggtgttgcgttcttctgaagagcacaaagaaaagctcaaaacagattccttacaaaga
ctacattcaacacacaacctcatggaactgctggtcgcgaaacatccagggataccacca
accttgcgagatagcaggcttgaagaagaggctaaacaacttagacaacattatatgagt
aaatccaatgcagaagttgcagaagctcatcaggcattgcagccagttctgcagaccatt
cgggagctccagagaaagatacattctggttcgccttggtggttggatgcaatccagaca
gcaatacaatatgccattgatgaggagcttgttcagcgtgtgcaaaatgagataaccagc
aactacaaacagcaaacgaataaactctccatggcagacaagttccgtgattgtagaggc
cttcagtacctgctcacatctcagctagaagaagtgaagaagttccagaagcttgtaaga
gaagctgtcaaaaacctagaaggccccccttcaaaggaagttattgaggctgccactatc
tgccatttgcggcctgttagacttcctctcaacaactgtgtcttctgtaaggctgatgag
ttgttcacagactatgagtcaaagctgttctctcatactgtgaaaggacagatggctatt
tttgaggagatgatagaagatgaagaagggcttgttgatgatcgtttacccactacaagc
cgaggactttgggcagcaagtgagacagagcgtgccttgaaagccatactctcttttgcc
aaagctcaccgtctggatgctaaactaactgaagagggcaacacatttctggagctcttt
gaagcatggaagaaggaatacaagttacttcatgaatattggatggtactgagggatcat
gtgtctgctatcgatgaacttgccatggccacagaacggctgagagtgcgtcatcctgat
gagcccaagcctaaccctccagtacttcacatcatagaaccacatgaggtagagcaaaat
cgagtgaaacttttgaatgacaaggcagttgccaaatcccagcttcagaagaaactaggc
cagctcctgtatctcactaatttagagaagtctcaggataaaaccactggtggagttaat
ccagaaccctgtccaatttgtgctcgccaactgggaaagcagtgggcagttctgacttgt
gggcattgcttctgtaatgaatgtatagctataattatagaacagtacagtgttggcacc
cgcaggagttcgattaagtgcgccatctgcagacagacaacctctcataaagaaatatct
tacgtcttcactgcagagactgcaaaccaagaagatgatattcctgtgaaggggagccat
tccaccaaagtggaagctgtggtacggactctgaagaaaatccaatgtaaagatccaggg
gctaaatctttggttttctcaacgtggcaagatgtactggatataatttcaaaagctctg
tatgataacaacatggtgtttgctcagatcaatggaattagtaaatttcaggaaaatctt
tcagcatttaaatatgaccccaagatcaatattttgctcttgcccctacatactggttcc
aatggattaaacataattgaagcaactcatgtcctgctggtcgaacccattctgaatcct
gcacatgagcttcaggcgattggcagagtgcaccgcattggccaaacaaagcccaccatt
gtgcacaggttcttaataaaagcaacaatagaagaaaggatgcagatgatgctgaaaact
gtggagagaagccacactagttcttccatgaaacagtcagaagcctcagttttgacagtt
gctgatctggcagacctttttacagaggaaactgaagaacttgaatga
DBGET
integrated database retrieval system
