Alligator sinensis (Chinese alligator): 102378984
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Entry
102378984 CDS
T02922
Symbol
CHD6
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102378984 (CHD6)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102378984 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
PSME4_C
Motif
Other DBs
NCBI-GeneID:
102378984
NCBI-ProteinID:
XP_025072054
UniProt:
A0A3Q0HJC0
LinkDB
All DBs
Position
Unknown
AA seq
2754 aa
AA seq
DB search
MYFSCIERSNAWQLSLHREPCPLQLSRLKQLRHSPMSDASDTCECKSQDPFASSEDQNEL
GHQVKASDFASQCQYLDEEPDEAMQKRMLSHNGMQGNGGGGTGVKKKRKKKDLGDQEVGE
KGTVEKETKPKRKREPKEPKEPKKLKEPKKLKEPKQKETTKKPRKPREPKGPRDPKDRKS
TSESTPKAKPKKARREQGPTPVEKKKKGKRKNEMPVESLELDHELLXXXXXXXXXXSGES
PEESIESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQA
EEPPEDDANIIEKILASRMAQKEAHVGDLAYEMEEFYVKYRNFSYLHCKWATLEELEKDP
RISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTEEEVTHYLVKW
CSLPYEESTWELEEDVDQGKIKEFESLQIPPEIRHMERPASESWQKLEKSREYKNSNQLR
EYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIRGPFLIIAPLSTIT
NWEREFRTWTEMNAIVYHGSQISRQMIQQYEMLYRDVQGNPLPGIFKFHVVITTFEMILA
DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN
FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE
LTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDF
RKTHSSDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR
RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN
PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTN
GVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKIADLDTDTKNEKWSLGIDRPRVRKQTKHYNSFEE
DELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFK
WHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPR
GRKGKKTKNQMLLPEIKNADWLATCNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAE
VLGEAAVKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRA
DPALCFLEKVGMPDEKLLSAEQGISDGVQDAADRGNAEKEESGGGKLEGLSKHEEAPSSC
GEVTEKRDDHVAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELTPRAEVLVPSN
HGYWLQDEMFRRATEMDPMNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKAFDWTQFRA
ISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPEMYVEPITEERAARTLYRIE
LLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMND
PQLSFLDAYRNYAQNKQTGIPGAENLCCLYQTNSKLYSSPLYSQMERTSEPTENEAESQI
KLENMDNIISQPEGSPQDGSSETFMCKGSNSDESSLADSLMCTMYDEKVYNSEQSSLTRD
SPSCTEMGSSAAKLSEDKLDGDEDPSSCEAEAIRETSLDHLQIGCDQMGNQNEGGEVLPS
APDSEPPQSVPAEICEVLPQEKGRGATQGAVSPELGTMEGVISIGLYGPSLHNYEIKLPP
EKRFINLQQEKGLEDKSVPSQSHSEEDDDEEEEDNSEMAADTVEGVTSSLEARVDGEPQV
NVLALEEQHSVLSATNKACPEVNSEVGSTGQGMSEGISKPGSREDDSTDQESLTKHSPNQ
PESEVFTSLPVRNLAVAIHLELPKTDPHRLGMDHWKANSTEQALCGTAQQLHGHKMKQDE
HKNKDEREKSCNTWRQDCPEKCLEEESKSSTSVLPAEIDEFQDTRAPTIAQLLQEKTLYS
FSEWPKDRVIINRIDNVCHAVLKGKWPSSNQQFETQNLMPTSLLTSSEGNRNSFTDSEAP
NPSFNDGALVSQESFLAPAFTKDEGKHRRLYEFEIERDVKQRSLEQLAASHPHTPIVLNG
WQDSAVDLSRTSDGSPGNACPFPLNTSAPKLGTVNSLQGSLGMDLSGILQAGLIHPVTGQ
IVNGSLQRDDAAMRRRRGRRKNVEGIDLVFLKERNLQTRLQDIQDQTQPPLSNSHPDGPV
TTTSTPQTATATSIQAEKAVPNKSLLDWLRQQSDYTLDVPGFGTNFSEKPKQRRQRCKDP
SKLDINSLTGDERVPVVHTGTGRRLGGAMAPALKELPRWLDAHLEYAVAADWADIVKLSG
FIPESKFNRILTEPVLRDTGPRRRGRRPRSELIKAPGVIADSSSGMGPLFMNGLIAGMDV
VGLQNMRNMQSIPLTGLVGFPAGFAAVSAGEDVKSTLSMLPMMLPGMASVPQMFGVGGLL
NPPMTTTCTSTAPSLLTSTKNGTSNAEKATEDKQSSQNVKKETLSEDKPGPSSFSDQTES
AITTSSPVAFNPFLIPGMSPGLIYPSMFLSPSIGMALPGIQQTRLSEVTNLESQKRKRKK
TKGESANPEQETVVLSEKETTNSQNCIEQTPPLSTEKEHDVPAEETESREINTN
NT seq
8265 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctcatgtattgaaagatccaatgcctggcagctgtccctgcacagagagcct
tgtccactgcagctgtcaaggttaaagcaactgagacattccccaatgtctgatgcctcg
gacacctgcgagtgcaagtcacaggacccctttgccagcagtgaggatcagaacgaacta
ggtcaccaggtgaaggcttctgactttgccagtcagtgccaatatctagatgaggaacct
gatgaggccatgcagaagaggatgttgtcccataatgggatgcaaggcaatgggggtggg
ggcaccggggtgaagaagaaacggaagaaaaaggacctaggggaccaggaggtgggggag
aaaggaacggtggagaaggagaccaaaccaaagaggaagagagaacctaaagaaccaaaa
gagcccaagaagctgaaggaacccaagaagctgaaggagcccaagcagaaggaaacaacc
aagaaacccaggaagccccgggagcccaaaggccccagggacccaaaagaccgaaagagc
acctccgaatccacccccaaggcaaaacccaagaaggccaggagggagcaaggaccaacc
ccggtggagaagaagaagaaaggaaagaggaaaaatgagatgccagtggagagtttggaa
ttggatcatgagctgctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctggggagagc
cctgaggagtccattgagtctgcagacagccagaagagacgctcaggacgccaggtaaag
cgaaggaaatacaatgaggacctggatttcaaagtggtggatgatgatggcgagacgata
gcagtactgggggctgggcggacctctgcactctccgcatccactcttgcatggcaagca
gaggagcctcctgaggatgatgccaacataattgagaagatccttgcctccaggatggca
cagaaagaggctcatgtgggagatttggcatatgagatggaggagttctatgtcaagtac
aggaatttctcctacctacactgtaagtgggcaactttggaagagctggagaaggacccc
aggatctctcagaagataaagcgctttcggaacaagcaagcacagatgaagcatattttc
acggagcctgatgaggatttattcaacccagactatgtggaggtggatcgaatcttagaa
gtggctcacacgaaggaccctgacaccgaggaggaagttactcactacctggtaaaatgg
tgttcattgccatatgaggaaagcacctgggagctcgaggaagatgttgaccaagggaag
attaaagagtttgaatccctccagattccaccagaaatcagacacatggaacgcccagcc
tctgagtcctggcagaaactggagaagtcacgggaatataagaatagcaaccagttgcgg
gaataccagctggaggggatgaactggctactctttaactggtacaacaggaagaactgc
atcttggctgatgagatgggcctggggaagactatccagtctatcaccttcctctcagaa
attttcttgatgggcattcgtggccccttcctcatcattgccccactctccaccatcacc
aactgggagagagagttccgcacctggacagaaatgaatgccattgtgtaccatggcagc
cagatcagcaggcagatgatccagcagtatgagatgctgtacagagatgtgcagggtaac
cctctccctgggatcttcaagtttcatgtggtcatcaccacttttgagatgatcctagct
gactgcccagaactgaagaagatccagtggcgctgtgtggtcatcgatgaggcccatcgg
ctgaagaacaggaactgcaaactgctagagggtctgaaacttatggccctggaacacaag
gtgctgctgacaggaactcctctgcagaactcagtggaagaacttttcagcctgttgaat
ttcctggaaccacagcagttcccctcagagactgcctttctggaggagtttggagacctc
aagacagaggagcaggtgaaaaagctgcagtcaatcctgaagcccatgatgctgcgacgg
ctgaaggatgatgtggaaaaaaacctggcacccaagcaggagaccatcatcgaggtagag
ctgaccaacatccagaagaaatactaccgggccatcctggagaagaacttttccttcctg
tcaaagggtgccaaccaacacaacatgcccaacctcatcaacacaatgatggagctacgc
aagtgctgcaaccacccgtacctcatcaatggggcagaagagaaaatcctggaagatttc
cgtaaaacacacagctcagatgcaccagacttccagctgcaggcaatgatccaggcagct
ggcaagctggtgctgattgacaagctgctccccaaactaattgctggtggacacaaggtg
ctgatcttttcccagatggtgcgctgccttgacatcctggaggactatctcatccagagg
cgatacacctatgaacggattgatggacgagtgcgtgggaacctgcgccaagctgctatt
gatcgcttctgtaagccagactcagatcgctttgtcttcctcttgtgcaccagggcagga
ggcctgggcattaacctcacagctgctgacacctgcatcatatttgattcagattggaac
ccgcagaatgacctccaggctcaagctcgctgccacagaatcgggcagagcaaggcagtc
aaggtttatcgcctgatcaccaggaactcctatgagcgggagatgtttgacaaagccagt
ctgaagctgggcctggacaaagctgttctgcaagacattaatcgcaagggcagcaccaat
ggggtacaacagctctcaaagatggaggtagaggacctattgcggaaaggtgcttatggg
gctttaatggatgaagaagatgaaggttccaagttctgtgaggaagatattgatcagatc
ctgcagcgcagaacacagacaatcactatccagtctgaggggaagggctccacctttgcc
aaggccagctttgtagcttcaggaaacagaactgacatttccttggatgatcccaacttc
tggcagaagtgggctaagatagcagatctggacacagacacaaagaatgaaaagtggagt
ttaggaattgacaggccccgtgtccgcaagcagaccaaacactacaattcctttgaggaa
gatgagctgatggagttctctgagttggacagtgactctgatgagcggcccacacgttca
cggcgcttcaatgagaagacacgacgttacctacgggctgagtgcttccgtgtagagaag
aacctactcatatttggctgggggcgctggaaggatatcctgacccatggtcggtttaag
tggcacttgaacgaaaaggacatggagatgatttgtcgggccctcctggtctactgcgtc
aaacactacaaaggagatgaaaagattaagagttttatctgggatctgatcactcctacg
aaggacggacagaaccaggccctgcaaaatcactcaggattgtctgcccctgtgcccaga
ggaaggaaggggaagaagaccaagaaccagatgcttctccctgagataaagaatgcagat
tggcttgcaacctgcaaccctgaaatagtcctgcatgatgacagttataagaagcacctg
aaacagcactgtaacaaggtgctgctgcgggtgcggatgctgtactacctgaaagccgaa
gttctaggggaggcagctgtcaaagccttcgaagggacccctgccagggaactggatgtg
ttgctgccagatattgactatgtggagatccctgtggactggtggaatgctgaggctgat
aaatcactgctcatcggtgttttcaaacatggttatgagaggtacaatgccatgcgagca
gatccagctctatgcttcctggagaaggttggcatgccagatgagaaactgctgtctgcg
gagcagggcatcagtgatggagtgcaagatgctgctgacagaggaaatgcagagaaggaa
gagagtggtggaggaaaactggaagggctatcaaagcatgaggaggctcccagttcttgt
ggtgaggtcactgaaaagcgggatgaccatgtggcagcccaggatggctccgactcagac
agatcctgctggcctgtttcatccgccctcacagccagactgcgacggcttgtcactgtc
taccagcgctgcaaccgcaaagagctaaccccccgagctgaggtcttggttccaagtaac
catggatactggctgcaagatgagatgtttaggagagccactgagatggatccaatgaac
aaggaaatgcagaaaaggtggaccaggagggagcaagcagatttttaccgtaccgtctcg
tcctttggtgtcatctatgaccaggagaagaaggcctttgactggacccagttccgagcc
atttcccgtctggagaagaaaacagatgagagcctagaaaagtacttttacagctttgtg
gccatgtgcaaaaatgtctgtggtctcccgctatggaaagaggatggtcctccagaccct
gagatgtatgttgagccaattactgaagaacgtgctgcaagaacgctgtatcgaattgaa
cttctcaggaaggtccgagagcaagtgctgaagtgtccccagctccatgagcggctcaag
ctctgcaggccaagcctgtaccttccagtatggtgggagtgtggcaagcatgaccgggac
ctgctgattggcacagccaaacatgggctgaaccgtactgactactacattatgaatgat
ccacagttgtcttttttagatgcatatagaaactatgctcagaataaacaaacagggatt
ccaggagcagaaaacctgtgctgcctatatcagactaactccaaactctatagctcccca
ctgtatagtcagatggaaagaactagtgaacccacagagaatgaagcagaaagtcagatc
aagctagaaaacatggacaacattatctcacagccagaaggcagccctcaggatggtagc
agtgaaactttcatgtgtaaaggtagtaactctgatgagagctctttggcagactctttg
atgtgcacaatgtacgatgagaaagtgtacaacagtgagcaaagctctctcacccgggat
agcccaagttgcacagagatggggagcagtgccgctaaactctcagaggacaaactagat
ggggatgaggacccatccagctgtgaggcagaggccataagagaaacctccttggaccat
ttgcagataggttgtgaccaaatgggaaaccagaatgaaggaggtgaagtgttgccttct
gccccagacagtgagccaccccagagtgttccagcagagatctgtgaagtcttgccacag
gagaaaggcagaggtgccacccaaggggcagtgtcaccagaacttggcaccatggagggg
gtcatcagcataggactatatgggcctagtcttcataactatgaaataaaactcccccct
gagaaaagattcattaatttgcaacaagagaaaggcttagaggataaatcagtgccaagt
caaagccacagtgaggaagatgatgatgaagaggaggaagataattctgagatggcagca
gacactgtggaaggtgtgacaagctccttggaggccagggttgatggtgagccccaagtt
aatgtgctagccctagaggaacagcattctgtcctttctgctaccaacaaggcttgccca
gaagtgaacagtgaggtggggtccacagggcaggggatgtcagagggtatcagcaagcca
gggagtagggaggatgacagcactgaccaggagagcctgacaaaacactcaccaaaccag
cctgagagtgaagtgttcacctctcttcctgtccggaacctggctgtagctattcatctg
gagcttccaaagacagatccccacaggttggggatggatcactggaaagccaactccaca
gagcaagcactatgtggtacagcccagcaactccatgggcacaaaatgaaacaagatgag
cacaagaacaaagatgagagagagaaaagttgcaacacctggagacaagattgtccagag
aaatgtttggaggaggagagcaagagttccacatctgtccttccagcagagatagatgag
tttcaggacacccgggcacccaccattgcccagttgctgcaggagaagactctctactcc
ttctcagagtggcctaaggaccgagtgatcatcaaccgcatagataacgtctgtcatgcc
gttttaaagggcaagtggccttcttctaaccagcagtttgaaacacaaaacttgatgccc
acttcactgttaaccagcagtgaaggcaataggaacagcttcactgactcagaagctcct
aatcccagcttcaacgatggagcactagtctcacaggaaagcttcctagctcctgccttt
acaaaagatgaaggaaaacatcggcggctgtatgaatttgagattgagagagatgtcaaa
cagagaagtcttgagcagctagctgcctcccacccccacacccccatagtgctgaatggc
tggcaggactcagcagtggacctgtccagaacctctgatgggtctccaggaaatgcctgt
cctttccctctgaacacaagtgcgcccaaattagggacagtgaactccctccagggttcc
cttggcatggacttgtctggcatccttcaggcaggattaattcatcctgtcacaggacag
attgttaatggaagcctccagagagatgatgctgccatgaggagaagacggggcaggaga
aaaaatgtggaagggatagaccttgtcttcttgaaggagaggaatcttcaaacaaggctg
caggatattcaggatcaaacccagcctccactgagcaactcccacccagatgggccagtc
actactacctcaactccacaaacggctacagctacaagcatccaggcagaaaaggctgtt
ccaaataagagtcttttggactggctgagacagcagtcagactatacgcttgatgttcct
ggctttggcacaaatttttcagagaagcccaaacaaaggaggcaacgctgcaaagacccc
agcaaattggacataaactcactcacaggggacgagcgagtacctgtggtacatacaggt
acaggacggaggttagggggagccatggcaccagcattgaaggaattgccaaggtggctt
gatgcacacttggagtatgctgttgcagcagactgggctgacattgttaagctttcagga
ttcataccagaaagcaagtttaatcgtatcctgactgaacctgtgctccgagacactggg
cctcgccggagggggaggaggcccagaagtgaattgattaaagcccctggtgttatagca
gattcttcttcaggaatgggaccattattcatgaatggacttattgctggaatggatgta
gttggacttcagaacatgagaaacatgcaaagcatccctttaactggtctggtggggttt
cctgctggatttgcagcagtgtctgctggtgaggatgtcaaaagcactctgagtatgttg
cctatgatgttgccaggtatggctagcgtaccacaaatgtttggtgttggagggcttctc
aacccaccaatgacaactacttgtacttcaactgctccaagtttgttaacaagcacaaaa
aatggtacatcaaatgcagaaaaagctactgaggacaaacagagtagccaaaatgtgaaa
aaagaaactctttctgaagacaagcctggtcctagttcattttctgatcagacagaatct
gcaataacaaccagtagtcctgtagcttttaatccatttcttataccaggaatgtcccct
ggactgatctatccatcaatgtttctttcacccagtattggcatggcattgccaggtata
cagcaaaccagactttctgaggtgacaaacctagaaagccagaagcggaagaggaagaaa
actaaaggggaatcagcaaatccagaacaagaaactgttgtgctctctgaaaaagaaaca
acaaacagtcaaaactgtatagagcaaacgccacctttgtcaacagagaaagaacatgat
gtaccagcggaagagacggagtcaagagaaattaatacaaattag
DBGET
integrated database retrieval system
