Alligator sinensis (Chinese alligator): 102379225
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Entry
102379225 CDS
T02922
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03022
Basal transcription factors
asn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102379225 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
102379225 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102379225 (ERCC2)
03036 Chromosome and associated proteins [BR:
asn03036
]
102379225 (ERCC2)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102379225 (ERCC2)
Enzymes [BR:
asn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102379225 (ERCC2)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102379225 (ERCC2)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102379225 (ERCC2)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102379225 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
SesA
Motif
Other DBs
NCBI-GeneID:
102379225
NCBI-ProteinID:
XP_025070102
UniProt:
A0A3Q0HEJ9
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MRLPQCPAQPLAVTKLIYCSRTVPEIEKLRRQQSWGRGRSEGGWGHPVAVAVVGRNGACR
QVSLLRFGKEVDGKCLSLTASYVRAQHQRDGTTPTCRFYEEFDVHGRQTPLPYGVYNLDD
LKGFGRQKGWCPYFLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNI
DNVCIDSMGVNITRRTLDRCQANMTTLQSTIHRIKETDAQKLRDEYRRLVEGLREASVAR
ETDVYLANPVLPDEILQEAVPGTIRTAEHFVGFLRRLLEYLKARLRAQHMVQESPPAFLK
DMHEKVCIERKPLRFCAERLRSLLRTLEIVDVADFSPLTLIANFATLVSTYSKGFTILIE
PFDDRTPTITNPVLHFSCMDASIAIKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMA
TFTMTLARTCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLELSAIVPDGIVAFF
TSYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSMALEKYQEACENGRGAILLSV
ARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRH
AAQCVGRAIRGKTDYGLMVFADKRYARADKRGKLPRWIQEHITDANLNLTVDEAVQVAKY
FLRQMAQPFHKEDQLGLSLLTLEQLQSEETLRRVEEIAHQA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcccgcagtgtccagcgcaaccgctggccgtgaccaagctgatctactgctcc
cgcacggtgcccgagatcgagaagttgaggcgccagcagagttggggcaggggcaggagt
gaggggggctgggggcaccccgtggccgtggccgtggtggggcgtaacggggcctgccgg
caggtgagcttgctgcgcttcgggaaggaagtggacggcaagtgcctgagcctgacggcg
tcgtatgtgcgggcgcagcatcagcgggacggcaccacgcccacctgccgcttctacgag
gagtttgatgtgcacgggcgccagacaccgctgccctacggtgtctacaacctggacgac
ctcaagggcttcgggcggcagaagggctggtgcccctacttccttgcccgctactcgatc
ctccatgccaacatcgtggtgtacagctatcactacctgctggaccccaagattgctgac
ctggtctccaaggagctggccaagaagtctgtggtcgtctttgatgaggcccataacatc
gacaacgtttgcattgattccatgggtgtgaacatcacgcgccgcacgctggaccggtgc
caggccaacatgaccacactccagagcactatccacaggatcaaggagacggatgcacag
aagctgcgggatgagtaccggcgcctggtggaggggctcagggaagccagcgtcgcccgc
gagactgacgtctacctggccaatcccgtgctgcccgacgagattctccaggaggcggtg
cccgggaccatccggacagcggagcacttcgtgggcttcctgcggcgtctcctggagtac
ctgaaggcacgactgcgggcgcagcacatggtgcaggagagcccccctgcttttctcaag
gacatgcacgagaaagtctgcatcgagcgcaagcctctccggttctgcgcggagcggctg
cgctccctgctgcgcaccctggagatcgtggatgttgctgacttctcgcccctcacactc
atcgccaacttcgccacccttgtcagcacctactccaagggcttcaccattcttattgag
ccctttgatgaccggacacccaccatcaccaaccccgtgttgcacttcagctgcatggat
gcctccattgccatcaagcctgtcttcgagcgcttccagtcggtcatcatcacctcaggg
acactgtctccactggacatctaccccaagatcctggatttccgccctgtcaccatggca
acctttaccatgacgctggccaggacctgtctctgccccatgatcgtggggcgtggcaac
gaccaagtggccatcagttccaagtttgagacccgtgaggacatcgctgtcatccgcaac
tatggcaacctgctgctggagctatcagccattgtgcccgacggcattgtggctttcttc
actagctaccagtacatggagaacatcgtggcctcgtggtacgagcagggcatcctagag
aacatccagcggaacaagctgattttcattgagacgcaggacggggctgagaccagcatg
gcactggagaagtaccaggaggcctgcgagaatggacgcggggccatcctgctttctgtg
gccaggggcaaggtgtctgagggtattgactttgtgcaccactacggccgtgccgttatc
atgtttggggtgccctacgtctacacccagagccgcatcctcaaggcacggctggaatac
ctgcgggaccagttccagatacgggaaaatgacttcctgaccttcgatgccatgcggcat
gcagcccagtgtgtgggccgggctatccgcggcaagaccgactacggcctcatggtcttt
gctgacaagcgctacgcccgggccgacaagcgggggaagctgccacgctggatccaggag
cacatcaccgatgccaacctcaacctaacagtggatgaggccgtgcaggtggccaagtac
ttcctgcgccagatggcccagccctttcataaggaggaccagctcggcctgtccctgctg
acactggagcagctgcagtctgaggagactctgcgccgtgtcgaggagatcgcgcaccag
gcctga
DBGET
integrated database retrieval system
