KEGG   Alligator sinensis (Chinese alligator): 102379450
Entry
102379450         CDS       T02922                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102379450 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asn03400]
    102379450 (TDP1)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102379450 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 102379450
NCBI-ProteinID: XP_006028412
UniProt: A0A1U7S360
LinkDB
Position
Unknown
AA seq 610 aa
MLQESEHGKWTISSSDESTEENSDHEKPSTSALLPNGHGKNRGPQYPCSEARKVAHKRKA
SPAKFTEGSFLTEVSPAKKQRTSQEGLGWCLSSSDEEPEPESQPKDVKKEMVKEEKYDMP
EDQLPCLRKDNNACSMSPKSEEHHEASGEVKGIWDLLNGRNPFRFFLTKVKGIKSKYNSG
ALHIKDILSPLFGTLVSSAQFNYCVDVGWLIRQYPQEFRKKPLLIVHGEKRESKAQLIAQ
ARPYENVSLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWYQKTQGIWLSPL
YSRLPSGTPGSSGESVTNFKSDLISYLVSYNSPSLKEWVDIIQEHDLSETKVYLIGSTPG
RYQGPQKEKWGHFRLRKLLKEHASPIPAQESWPVIGQFSSIGSMGADQSKWLCSEFQESL
VALGNRAKTLARQDIPVHLVYPTVDNVRQSLEGYPAGGSLPYSMQTAQKQLWLHSYFHKW
SAEVSGRSHAMPHIKTYMRASPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELG
VLFLPSAFQLDTDYFHVKENFFSENQESVASFPVPYDLPLEQYGSKDRPWIWNIPYTKAP
DTHGNMWVPS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgcttcaagaaagtgaacatgggaaatggacgatatctagcagtgacgaaagcacagaa
gaaaactctgaccatgagaagccatctacatctgcattattaccaaatgggcatggcaaa
aatagaggaccacagtacccatgttcagaagccagaaaagttgctcacaagagaaaagct
tctcctgcaaaatttactgagggaagttttcttactgaggtatctccagcaaaaaaacag
agaacttcccaagaaggcttaggctggtgtctttcaagtagtgatgaagaacctgaacct
gaaagtcagccaaaggatgtgaaaaaagaaatggtcaaagaggagaaatatgacatgcct
gaagaccaacttccatgtctacgtaaagataacaatgcatgctcaatgagtcccaaatca
gaagagcatcatgaggcatcaggtgaagtaaagggcatttgggatttgttgaatggaaga
aatcctttcagattcttcctcactaaagttaaaggcattaaatctaagtacaactctgga
gcacttcatataaaagatattttgtcacctctctttggaactcttgtgtcttctgcccag
tttaactattgcgtagatgtgggatggctcataagacagtatccacaggagttcaggaaa
aagcctttattaatagtccacggtgagaagagagaatccaaggctcagctgattgcacag
gcacgcccatatgaaaatgttagcctttgccaggctaagctggatattgcctttgggacc
caccacacgaaaatgatgttgttgttatatgaagaaggtcttcgagttgtgatacacaca
tccaacctcattgctgatgactggtaccagaaaactcagggaatatggttaagtcctcta
tattcaaggctaccttcaggaactcctggttcttctggtgaatctgtaaccaattttaag
tctgacttaataagctacttggtatcttacaattctccatctctcaaagagtgggtggat
ataatccaggaacatgatctttcagagacaaaagtatatctgattggatcaaccccagga
agataccaaggccctcaaaaagaaaagtggggtcactttaggctcagaaagcttttgaaa
gagcatgcatcaccaataccagcccaagaatcttggcctgtaataggacagttttcaagt
atcggatccatgggagctgaccagtccaaatggctgtgttcggaatttcaggagagcctg
gttgctttaggcaacagagcgaagactctagcgagacaagacattccagtccatttggtt
tatcctactgtggacaatgtgaggcagagtttggaaggataccctgctggtggctcactt
ccctacagtatgcaaacagcacagaaacaactttggctgcattcctatttccacaaatgg
tcagcagaggtctcaggccgaagccatgccatgcctcacattaagacttatatgagggca
tctcctgacttccagaagattgcatggtttttagttaccagtgccaatctttctaaagct
gcttggggagctttggagaaaaatggcacccagctgatgatccgttcctatgagcttgga
gttcttttcctgccttcagcatttcagttggatacagattacttccatgtgaaggagaat
tttttttcagaaaatcaagagtcagtggcatcttttcctgttccttacgatttgcctctg
gaacagtatggaagcaaagaccgaccatggatttggaatatcccctacaccaaagcaccg
gatactcatggaaacatgtgggttccatcatga

DBGET integrated database retrieval system