Alligator sinensis (Chinese alligator): 102379492
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Entry
102379492 CDS
T02922
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102379492 (TDRD12)
Enzymes [BR:
asn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102379492 (TDRD12)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102379492 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102379492
NCBI-ProteinID:
XP_006016670
UniProt:
A0A1U7REQ5
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MIEVLILKIEDPGCFWVILKGCGSFVDNEVEYRKLHADMNQFYNQSCRDVDEVMPLTLEE
GQVCVVFCQELRCWCRAVINTIMSCTDHCLVECFLVDYAKYIPVKTRDIRVAVEAFMRLP
YRARKFRLYCIKPVTLHIDFCEDTAEIVPAKIWDGAAIQYFQKLLRETTQIEAKLCAIED
EHFDVYLYVTVQDEKVCVNDELVAKNFACYMSTEENTNNPANKPSKQSKNFACYMSTEEN
THNPANKPSKQSPLSLVGFPEKVISPVLALWPVLLQGKAPKNLKTGPTQFELPDISLSVN
SPGRTASNPLLEKNGKNLSTTSFNGHNESTVSVFLGFPFKENITISGQTDSDLLEITCKK
QLKEIQQDEKSGCVKLLQFLNPDPLKTDHFQNEKQEFLKVSAEQHFVVFNKKIEPCSSLE
TAPLLVDLKKELLWNKFIGPTFTQSYCWPPIARGCDVVVISHHGNDPLLYIPPILTFLQS
RVCYKSLPSGNGPTTLIVCPGWKKAQLVFELLKKYGRCSRQLHPMLLLVGLKNEEVKNMK
FLQGCEVIVTTPYSLLRLLEHHSLLLLRLCHLVLDEVEVLLSEASKQVFMILEYYRKTIP
VPGRESAPRQIVVVGTRWNKHIEHVTREFMNDPYIVITSVEEACIYGNVQQVVHLSLNCD
KISVLLRILDFTPSNAQKTLVFTNSVDETEMVYRVVESNAIFCLKIHKEIEYHFKYVEEQ
WRKKFSPGTHVVLVSTDDCMKYLGITDATCVVHFSFPSSPSVFGTRLHSMSDNFRSGIEK
SSLKDDKFTKAKSILLLTERNGCHAVGVLHYLEHTDAKIPPELSDFAAGVLKAKEDMKLA
RPLCRYLKTLGVCKDMRICPDRHQVNLQIDFPPKSSDQIRSTAGYVTILPLHIVDATNYF
GRIVDKKEDQYAILAVEMDKHFKKAGNKVSVEMAKKLSLYGLHEEKTFHRVQVLEIFPKE
ENGFFYNVSIKYIDEGRTGQVRGHQLFSLPAEFQSLPPQAVEFIVCRVKPIDNETEWSPK
ITRYIHQKIKGKLHEARVVLTLGNTVWVDPMVQVIRLPDLKISVNEYNIRSEILSMGMGT
DNPEHIKQLQKLCESAKMLAPEKKTLQTLIRDMASPQREPEQDMDSVQSPLLGEKLSENC
NFSQTILDHQSGAIAEIEAENSTQHHHKCFYPEIKWFQKEDTVTMKIKIRNVTDCKCEFL
RNKVIFSAFSEDKFYLVDTELYENILTEKSVCEIKNEEPVIILAKEKKESWLKLLKHKNP
NVSFDFEHWEDFGDESPFPVGAEKVHHPATLAMEEMEESSGSETESDD
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttttgatattaaagattgaagatccaggttgcttttgggtcattctgaaa
ggatgtggatcttttgtagacaatgaagtggaatatagaaaactgcatgctgacatgaat
cagttctataaccaatcttgtagagatgtggatgaagtaatgccattaacgttagaagaa
gggcaggtgtgcgtggttttttgtcaggaactgagatgctggtgtagagcagttattaac
acaatcatgtcctgtacagatcattgcctggtagagtgcttccttgtggattatgccaag
tatattcctgttaaaacaagagacattcgggttgcagtggaagcatttatgcgactccca
tatagagcaagaaagtttagattatactgtataaagccagtgacgttgcacatcgacttc
tgtgaagatactgcagaaatagtacctgctaagatttgggatggtgctgctattcagtac
ttccaaaagctgctcagagaaaccacgcagattgaggctaagttatgtgctatagaagat
gaacactttgatgtttatctttatgtaacagtacaggatgaaaaggtatgtgttaatgat
gaacttgttgcaaagaactttgcttgttatatgtctactgaagagaacacaaataatcct
gcaaataaaccaagcaagcagtccaagaactttgcttgctatatgtctactgaagagaac
acacataatcctgcaaataaaccaagcaagcagtccccattaagtctcgtgggttttcca
gaaaaagtgatcagtcctgtacttgctctttggccagtgctcttacagggaaaggcaccc
aaaaacctaaaaacaggtcccacacagtttgagctccctgacatctctctcagtgtcaat
agccctgggcgcactgcttcaaatcctcttctggaaaagaatggtaaaaatctttcaact
acatcttttaatggacataatgagtctactgtcagtgtgtttctcggctttccttttaaa
gaaaatataactatttctggtcagacagacagtgacttacttgaaatcacatgtaagaaa
caactgaaagagatacaacaagatgaaaagagtggctgtgtaaagcttttgcagttttta
aatcctgatcctttgaaaacagatcattttcagaatgagaaacaggagtttctaaaggtc
agtgcagaacaacattttgttgtttttaacaagaaaatagaaccttgttcatctcttgaa
acagcaccacttcttgttgatctgaaaaaggagcttctctggaataagtttataggccct
actttcacacagtcttattgttggccacctatagctcgtggatgtgatgtagttgtcatc
tctcatcatggaaatgatcctctgttgtatattccaccaattcttacatttttgcaatca
agagtctgctacaagtcattgccaagtgggaatggtccaacaacgctaatcgtgtgtcct
ggatggaagaaagcacaacttgtttttgaattattgaaaaaatatggcagatgttccaga
cagttgcatccaatgttgttattagttggactgaaaaacgaagaggtcaaaaatatgaag
tttctacaaggatgtgaagtgattgtaactacaccatacagccttttaagactgcttgaa
caccatagtttattattacttagactttgtcatctcgttcttgatgaggttgaggtactg
ttatcagaagccagcaaacaagtatttatgatcctagaatattataggaaaacaatccct
gttccggggagggaatctgcgccacgtcagattgttgttgttggaactcgttggaataaa
catatagaacatgtaacaagagagttcatgaatgatccttatattgtgataacatctgtg
gaagaagcatgcatatatggaaatgttcaacaggtagtgcacctttctttgaattgtgac
aaaatctctgtactactcaggatattggatttcacccctagtaatgctcagaagaccttg
gttttcactaattctgtggatgaaacagaaatggtttatagagtagtggagagcaatgca
atattttgcttaaaaatacacaaggaaattgagtatcatttcaaatatgttgaagagcaa
tggagaaaaaaatttagtcctggcactcatgttgtgttagtttcaactgatgactgcatg
aaatacttgggaattactgatgcaacttgtgtggtacatttcagttttccgtcctctcca
agtgtctttggtacacgcttacacagcatgtctgataactttcgaagtggcatagaaaag
agttctttgaaagatgacaaatttactaaagcaaaatcgatcttgttgctgactgaaaga
aatggatgccacgcagttggtgtgctgcattacttggaacacacagatgctaaaattcca
ccagaattgagtgactttgcagctggagtgctcaaagctaaagaagatatgaaactagca
aggcctctttgtcgttatcttaaaacacttggggtttgcaaggatatgaggatatgtcca
gatcggcatcaagttaatttacaaatagatttccctccaaagtcttcagatcaaattaga
tcaacggctggatatgtcacaatactacctctccacattgtggatgcaacaaactacttt
ggtcgcatagtagataagaaagaggatcaatatgcaattcttgctgtagaaatggacaag
cattttaagaaagctggtaataaagtatcagttgaaatggcgaagaaactatcattgtat
ggattacatgaagagaagacttttcatcgggttcaagtattagagatctttccaaaagaa
gaaaatggctttttctataatgtttctatcaagtacatagatgaaggtagaactggtcag
gttcgaggccatcagttattttccttacctgcagaatttcagagtttgccccctcaggca
gtggaattcattgtttgtagagtaaaacctattgataatgaaactgaatggagcccaaag
attactagatatattcatcagaaaattaaaggaaaattgcatgaagcaagagtggtgctt
accttgggaaatacagtttgggttgatccaatggtccaagtcatcagacttccagatttg
aagatttctgttaacgaatacaatattagatctgagattttgtctatgggaatgggaact
gataatccagaacacataaaacaactccaaaaattgtgtgaatctgctaaaatgttagct
cctgagaaaaagaccttgcaaactcttattagggacatggccagtccgcagagggagcca
gaacaggatatggacagtgtgcagagcccattattaggagaaaaattgtctgaaaattgc
aatttctcccaaactattttggatcatcaaagtggtgccatagctgaaattgaggcagaa
aactctacacagcatcatcataaatgtttctatccggaaattaaatggtttcaaaaggaa
gatactgttaccatgaagataaaaataagaaatgtaactgactgtaaatgtgagtttttg
agaaacaaagttattttcagtgctttttcagaagacaaattttatttggtggatacggag
ctgtatgaaaatatacttactgaaaagtctgtatgtgagattaagaatgaagaacctgtg
attatccttgcaaaagaaaagaaagaatcatggctcaaactgctaaagcacaagaatcct
aatgtgtcttttgacttcgaacattgggaagattttggagatgaaagcccctttcctgtt
ggtgctgaaaaagtacatcatcctgctacactggcaatggaagaaatggaggaatcctca
ggcagtgaaacagaaagtgatgactaa
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integrated database retrieval system
