Alligator sinensis (Chinese alligator): 102379938
Help
Entry
102379938 CDS
T02922
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X3
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102379938 (CHD2)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102379938 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
102379938
NCBI-ProteinID:
XP_006027753
UniProt:
A0A1U7S1T8
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSHASSHSASEEASGSDSASQSESEQGSEQGSEHGSDSNSSSESS
ESQSESESESTGSKSQQTPPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKDEASSESENESPKRRGQKQMKKTNKWKGEVSGEEEDEDGGGQGTSAESEPEPKKV
KARRPAPRRAVAKTSVKKPHKPQRGKRRKKQDSSEDDDDDDDDETPKRQTRRRAANNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDVRIGKKGATGASTTMYATEANGDP
SADFDPEKDEREVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWL
AKVSPEDVEYYNCQQELAAELNKQYQIVERVIAMKTNKSATGHSEFPAHSRKTSSTDPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKNIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLIVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIREYEWIHAQTKRLKFNVLI
TTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERENGSEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEEEETELDEKSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLYKSIPTDLEERKKYCLTCRV
KAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLADKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKENTKDGEESKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNP
SEEGEVKEDGLEKSPVKKKQKKKENKENKEKQTTTKKEKEGDKEKKKTKDKKEKAKSSDA
KSGSKGTRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKG
LMVQEQLEHTRNCLLKIGDRISECLKAYNDQDHIKLWRRNLWIFVSKFTEFDARKLHRLY
KMAHKKRSQEEEEQKKKEDMSGAKKPFRPEPSGSSHDSVMSQSHMPHNLHSQKLHLPPSH
PQQQMHGHQRDNYSHPNKRHFSNTDRGDWQRDRKFNYGGNSNQVWGGDRHHQYEQHWYKD
HHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEPYNSERDHRGHRDYYDRHHHDSKRRRSDE
FRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHIDKSGDYKQPLPLPHPQVSDPRSP
PSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNMRKT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagccatgcatcg
agtcactcggcatctgaagaggcctctggctccgactctgcaagccagtctgaaagtgag
cagggcagtgagcagggcagtgagcatggcagtgattcgaacagcagttcggagtcctcc
gagagccagtccgagtccgaaagcgagtcgacgggctcaaaatcccagcagaccccgcct
gaagccaaggaaaagccagcctccaagaaggaaaggatagcagatgtgaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagagccgtcg
cgatttaatataaaagatgaggcaagtagcgaatctgaaaatgagagccccaaaagaaga
ggccagaagcaaatgaaaaaaacaaataaatggaaaggggaggtttctggggaagaggaa
gatgaagatggaggggggcaaggcaccagtgcagaaagtgaaccggagccgaagaaagtt
aaagctaggagacctgccccaagaagagcagtggccaaaaccagtgttaaaaagccccac
aaaccccagcgtgggaagaggagaaagaaacaagactcatcggaagatgacgatgacgat
gatgatgatgagactccgaaaaggcaaactcgccgcagagcagccaataatgtcagttac
aaagaagatgatgattttgagactgattcggatgacctgattgagatgaccggggaagga
gcggacgaacagcaggacaacagcgagaccattgagaaagtcttggatgtcaggattgga
aagaaaggagccactggcgcttccaccaccatgtatgctacggaagccaatggtgacccg
agtgctgattttgaccctgaaaaggatgaaagagaagttcagtacttgatcaaatggaag
ggctggtcttacatccacagcacgtgggaaagtgaagagtccctgcagcagcagaaggtg
aagggtctgaaaaagctagaaaacttcaagaagaaagaggaggaaatcaaacagtggcta
gccaaggtgtcccccgaagatgtggaatactacaactgccaacaggaactggctgcagag
ctgaataaacagtatcaaatagtggagagagtgattgctatgaagaccaacaagtctgca
acgggacattctgaattcccagctcacagtcggaaaacatcctctaccgatcctgagtat
ctgtgcaagtggatggggctgccatacgcagaatgcagctgggaagacgaggctctgatc
agtaagaaattccaacactgcatcgacagcttcaacaatcgcaacaactccaaaaacatt
cccacgcgggattgcaaggtgctgaagcagagacctaggtttgttgccttgaagaaacag
ccttcttatattggtggcgagaacctggagctccgagattaccagctggaaggcctcaac
tggcttgctcactcgtggtgcaagaacaacagtgtgatcctggctgatgaaatgggcttg
gggaagactatccagacaatatcattcctctcctatctcttccatcagcatcagttgtac
ggcccctttctaatagtggtacctttgtctactctcacctcatggcagagagagtttgaa
gtctgggcaccggagataaatgtggtcgtgtacataggagatctgatgagcaggaatacg
atccgtgaatatgagtggatccatgctcagacgaaaaggttgaaattcaacgtgctcatc
acaacgtacgagatcctcctcaaagataaggctgtcctgggcagcattagctgggccttt
ttgggagtggacgaagcccatcgactgaagaatgatgactctctgctgtataaaactctg
attgatttcaagtccaatcacaggctgctgatcactgggaccccacttcagaattctctc
aaggagctctggtcactgctgcactttattatgccagagaagtttgagttctgggaggat
tttgaagatgatcatgggaaagggagagagaacggctaccagagtcttcacaaagtcctg
gagccttttctcctgcgcagggtgaagaaggatgtggaaaaatccctgccagccaaagtg
gagcagattctccgggtggaaatgtctgccctgcagaagcagtattataaatggattttg
accagaaattacaaggctctttctaaagggacaaggggcagcacatctggcttcctgaat
attgtgatggagctgaagaagtgctgcaaccattgctatctcatcaaacctccagaggaa
aatgagagggagaatggctctgagatactgctgtctctgatcaggagcagtggaaagcta
attctcttggacaagctgctgaccaggctgcgtgagaggggtaacagagtcctgatcttc
tctcagatggtgaggatgctggacatcttggcagagtacttggctatcaagcactaccct
tttcagcgcttggacgggtcgatcaaaggcgaaatccggaagcaggctctggatcacttc
aacgctgatggctctgaggacttctgtttcctgctgtcaacacgagctggtggactgggg
attaacctggcttctgcagacaccgtggtgatctttgactcggattggaacccccagaat
gacctgcaggctcaggcccgggctcacagaatcggacagaagaagcaggtgaacatttac
cgcttggtaacaaagggaacagtagaagaggagatcatcgagagggccaagaaaaagatg
gtgttggatcatttggtgatccagcgtatggacaccacaggtcggactgtactggataac
aattctgggagatccaactcaaatcctttcaacaaagaggagctgacagctattctgaag
tttggagcagaagacctcttcaaggagctagaaggggaagagtcagaacctcaggaaatg
gatatcgatgagattctgcgcctggctgaaacacgagagaacgaagtgtccacgagcgcc
acggatgagctcctgtcccaattcaaggtggccaactttgcaaccatggaggaggaagag
actgagctggatgagaagtcccagagggactgggatgacatcattcctgaggagcagagg
aagaaagttgaggaggaggaacgacagaaagagctggaggaaatctacatgttacccaga
atccggagctctaccaaaaaggctcagacaaatgacagtgagtcagatgctgaaacaaag
aggaggcttcagaggtcttctgggtcggagagtgagaccgatgacactgatgatgaaaaa
aggccaaagcgcagaggccgtccccggagcgtgaggaaggataccgtggaaggattcacc
gacgctgaaatcaggaggtttatcaaggcttataagaagtttgggcttcctcttgaaagg
ctggagtgcattgcccgggatgctgagctggtggacaagtctgtagccgatctgaaacgt
ttgggggagcttattcacaacagctgcgtgtcagcgatgcaagaatatgaggagcagctg
aaagaaaatcccggtgaggggaaagggcctgggaaaaggaggggcccaaccatcaagatt
tctggagtccaagtcaacgtcaaatccatcatccagcacgaagaggagtttgaaatgctg
tacaaatccattcccacagaccttgaggaaaggaagaaatattgcctgacctgtcgtgtc
aaagctgcccattttgatgttgactggggagtggaggaggattctcgcttgttagttgga
atttatgaacacggctatggaaactgggagctaattaaaacggacccagaactgaagtta
gctgataagatcctacctgttgagacagataagaaacctcagggaaagcagctccagacc
cgagtcgactatctgctgaaactgctgaagaaagatctggagaagaaagaaaacacgaaa
gatggggaagagagcaaactaaagaagaggaaaccacgtgtaaagaaagagaataaagct
cctaaagtcaaagatgagcatgggaatgaactgtcctcgcctcggcactcggacaaccca
tcagaagagggtgaagtcaaggaggatggtttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaagagaacaaggagaaacagacaaccactaaaaaggagaaggaa
ggcgacaaagagaaaaaaaagacaaaggataagaaagagaaggccaaaagcagtgatgca
aaatctggaagtaaagggacgagatctcagggtcctgtgcacattactgcaggaagtgaa
cccatccccattggcgaagatgaggatgatgatctggaccaagaaacattcagcatatgc
aaagagaggatgaggccagtgaagaaggcattgaagcaactggataagccagataaggga
ttgatggtgcaggaacagctggagcacacccgcaactgcctcctgaaaattggggatcgc
atctcagagtgccttaaagcgtataatgaccaggatcacattaagctgtggagaaggaac
ctgtggatctttgtgtccaagttcacagaatttgatgccagaaaactgcacaggctctac
aagatggctcacaagaaaaggtcccaggaggaggaggagcagaagaagaaggaggatatg
tctggagccaaaaagccatttcgcccagaaccgtcaggctccagccatgactctgtgatg
tctcagtctcacatgcctcacaacctgcactctcagaaactccacctgcctccctcccac
cctcagcagcagatgcatggccaccagcgggataactacagccaccccaacaagagacac
ttcagtaacacagatcgaggcgactggcagagagatcgaaagtttaactatggtggtaac
agcaaccaggtctggggtggagatcggcatcaccaatacgaacagcattggtacaaggat
caccactatggggatcgccggtctcgcggcgacccgcaccgaagctctgggaactaccga
ccaaataacctctcccgcaagaggccgtatgagccgtacaatagtgagcgagaccacaga
ggacacagagattattacgacagacaccatcacgactccaagcggcgacgatccgatgag
ttcaggccccagaattaccaccagcaggatttccggaggatgtcagatcacaggccaccc
atgggataccatggccagggaccttcggaccattaccggtccttccacatagacaaatcg
ggagattacaaacagccgcttcctcttcctcacccccaagtctcagaccctcgctcgccc
ccatctcagaaatcccctcacgattccaagtcgcccctcgatcaccggtcgcccctggac
aggtcattagaacagaaaaacaatccagattataactggaacatgcggaaaacataa
DBGET
integrated database retrieval system
