Alligator sinensis (Chinese alligator): 102379949
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Entry
102379949 CDS
T02922
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04510
Focal adhesion
asn04512
ECM-receptor interaction
asn04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102379949 (TNC)
04518 Integrin signaling
102379949 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102379949 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asn00536
]
102379949 (TNC)
Glycosaminoglycan binding proteins [BR:
asn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102379949 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF
Pur_ac_phosph_N
Fn3_PBP1
hEGF
Fn3_Dep-1_2nd
DUF7949
EGF_PEAR1L
NDNF
Fn3_R-PTP-O
Motif
Other DBs
NCBI-GeneID:
102379949
NCBI-ProteinID:
XP_006031179
UniProt:
A0A1U7S8Q5
LinkDB
All DBs
Position
Unknown
AA seq
2437 aa
AA seq
DB search
MGLPTQVLACAIIVLLHQHVSGGLIKRIIRQKREAGLNVTLPDDNQPVVFNHVYNIKLPV
GSLCSVDLDSASGDADLKAEIEPSKHYEEHTVNEDNQIVFTHRINIPRRACGCASAPDIK
DLLNRLEELEGLVSSLREQCTIGAGCCPSAQTAEGRVDTTPFCSGRGNYSTEICGCICDP
GWKGPNCSEPECLNNCYNRGRCVNGKCICDEGFTGKDCSELTCPGDCNDQGKCIDGVCVC
FEGYTGEDCVEELCLPPCSEHGKCVNGRCVCVEGFTGEDCGEPLCLNNCNNRGRCVENEC
VCDEGYTGEDCGELICPNDCFDRGRCINGTCYCEEGYTGEDCGELTCPNNCNGNGRCENG
QCLCDEGFVGDDCSERRCPKDCNKRGRCIDGQCVCNEGFEGIDCGQVKCPKDCNNRGQCV
NGQCVCNEGFMGEDCGVLRCPKDCSNHGRCINGQCECDEGFMGEDCSELKCPNDCHNRGR
CVKGHCVCDEGFIGEDCGELRCPNDCYNRGRCVKGICVCDEGFVGNDCSELRCPNDCSKH
GRCVNGQCVCDEGYTGEDCSELRCPNDCHNRGRCVDGECLCEKGFTGVDCGELACLDNCN
NRGRCENGQCVCNEGFTGIDCSQLRCANDCNNQGRCIEGQCVCDEGFTGEDCSQRSCLNN
CNNLGRCVDGRCICDNGYIGDDCSDVSPPSDLTVTNVTDKTVNLEWKNENLVNQYLITYV
PTSIGGLDMQFTVPGNQTSATIRELEPGVEYFIRVFAILKNKKSIPISARVATYLPAPEG
LKFKSVRETSVQVEWDPLNISFDGWELIFRNMKKEDNGDITRSLTRPETSYMQPGLAPGQ
QYNVSLHIVKNNTRGPGLSKVITTKLDAPSQIEAKDVTDTTALITWFKPLAEIDGIELTY
GPKDVPGDKTTIDLSEDENQYSIGDLKPFTEYEVVLISRRGDMESDPMSEVFLTDLDAPK
NLKRVSQTDNSITLEWKKSQADIDSYRVKFAPISGGDHAEITVPKSNQATTKATLTGLRP
GTEYGIGVTAVKEDTESAPATINAGTDLDSPKDLGVNNPTETSLSLSWRRPLAKFDRYRL
TYVTPSGRKNEVEIPADSTSYILQGLDAGTEYTTSLIAEKGRHKSKPTTVKSSTAVYSLE
LMQGATPGPDEHSGFWSSPAPEASGMWEATLWDLLVSNVTDHGFGLSWKADAGAYTSFVV
EYEEVTLAAGPPAEVFMPGESLGAVIDGLQANATYKVKVYGMAGGQRSHPLEAVATTALL
VTAPGESNNETSFNSTYPAPTELSYLTIPSTDSHTVLSAPTAFFISDVTAQLHDLKVTGR
TFSSFTLTWAAQDEVFDQFFITLKDLSSLNRTLEIFLPGSQRETEFTNLTAGTQYQINLH
GSARGQLSQSLEAITNTAEEPELGNLTVSEVSWDGFQPTWTAADGAFETFVLQVQESDNP
EEVQNHTVPGGLRFVNITALKDYTRYNITLYGVIQGYRTKPLSAETTTAMRAEVGELNVS
GITPEGFNLSWTATERAFEIFTIEIINSNRFLEPMEYNISGNLRTAHISGLSPSTDYIVY
LYGITPGFRTQAISVAVTTVDEPLLSKLTVSNATSNSVSLTWEAQDTAFDHFVLEVRNSD
LPLDSLVHTVSGASRSFVITNLRAATNYTVQLHGLVDGQSGQTLTAVATTEAEPQLGTLT
LTNVTPDSFNLSWTTRNGPFAKFVINVRDSYSAHEPQELTVSGGARSAHISGLVDYTGYD
INIKGTTSAGVHTEPLTAFVMTEAMPPLENLTVSDINPYGFTVSWMASENAFDNFLVIVV
DSGKLLDPQEFLLTGTQRHLKLKGLITGIGYEVMLYGFAKGRQTKPLSIVAITEAEPEVD
NILVSDITPDGFRLSWTADDGVFDSFFIKIRDTKKQSDPWERIVPGHERTQDITGLKEGT
EYEIELYGIISGRRSQPINAIAITAMGSPKGINFTDITENSATVTWMLPRTRVESFRILY
APKTGGTPNIVTVDGTKTRTKLVKLVPGVEYVVNITSVKGFEESEPVSGPLKTALDSPSG
LVVVNITDSEALATWQPAIAAVDNYVISYISETEPEVKQMVSGNTVEYDLNGLRPATEYV
LRLHAVEDGQQSATISTKFTTGMDAPRDLRAIDIQSETAVLTWRPPRASLTGYLLIYESA
DGKVKEVILVPETTSYDLTELSPSTQYTVKLRALHRSLKSNIIQTVFTTSGLLYPFPKDC
SQALLNGETASGLYTIYLNGEKSQPLEVYCDMGSDGGGWIVFLRRRNGKEDFYRNWRTYS
AGFGDPKDEFWIGLENLHKITSQGQYELRVDLRDKGETAFAIYDKFSVGDSKTRYRLKVD
GYTGTAGDSMTYHNGRSFSTYDKDNDFAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHS
QGINWFHWKGHEYSIEFAEMKLRPSSFRNLEGRRKRA
NT seq
7314 nt
NT seq
+upstream
nt +downstream
nt
atggggctcccaactcaggttttggcctgtgcaatcatagttttgttacaccagcatgtc
agtggtggactcatcaagagaattattcggcaaaagcgggaggctggtttaaatgtgacc
ttgccagatgataatcagcctgtagtttttaaccatgtctacaacattaagttgcctgtg
ggatccctctgctctgtggacttggattcagctagtggagatgcagacctgaaggctgag
attgagccaagcaagcactatgaggagcacacggtgaatgaggacaaccagatcgtcttc
acgcatcgcattaatattcctcggcgggcatgtggctgtgcatctgctcctgatattaag
gatctgctgaacagactggaggagctggaggggctggtatcttccttacgagagcagtgt
accattggtgcaggctgctgccccagtgcccaaacagcagaaggtcgagtggataccaca
cccttttgcagtggacgagggaactacagcactgagatctgtggctgcatttgtgaccct
ggctggaaaggacccaactgttcagaaccagaatgcctgaacaattgctacaacagaggc
cgctgtgttaatggcaaatgcatctgtgatgagggcttcacaggcaaggactgcagcgaa
ctcacctgccctggtgattgtaatgaccaaggcaagtgcattgatggtgtgtgtgtatgc
tttgagggttacaccggagaagactgtgttgaagagctttgcctaccaccttgcagtgag
catgggaagtgtgtgaatgggcggtgcgtgtgcgttgaaggcttcactggggaggactgc
ggtgagcccctgtgcctgaacaactgcaacaaccgtgggcgctgcgttgaaaatgagtgt
gtctgtgatgagggctacacaggtgaagactgcggcgaactgatctgccccaatgactgc
tttgaccgtggccgctgcatcaatgggacttgctactgtgaagagggctacactggggag
gactgtggggagctgacctgtcccaacaattgcaacggcaatggccgctgtgagaatggt
cagtgcctctgcgatgaaggctttgtgggtgacgactgtagtgagcggaggtgccccaag
gactgtaacaagcgtggtcgctgtattgatgggcagtgtgtgtgcaatgagggctttgag
ggcatcgactgtggccaagtgaagtgccctaaagattgcaacaaccgtgggcagtgtgtc
aatggacagtgtgtatgcaatgagggattcatgggtgaagactgtggtgtactaaggtgc
cccaaggactgctccaaccatggacgctgcatcaatggacaatgcgagtgtgatgagggt
ttcatgggtgaagactgcagtgagctgaagtgtcccaatgactgtcacaaccgtggacgc
tgtgtcaaggggcactgtgtgtgcgatgaggggttcataggcgaagactgtggtgagctg
aggtgccccaatgactgttacaaccggggacgctgtgtcaaaggcatctgtgtgtgtgat
gagggctttgtaggcaacgactgcagtgagctgaggtgccccaatgactgtagcaaacat
ggacggtgtgtcaacgggcagtgtgtgtgtgatgaaggatacacaggagaagactgttct
gaactgaggtgtcccaatgactgccacaaccgaggccgctgtgtggatggggagtgtctg
tgtgagaaggggttcactggagtggactgtggtgaacttgcttgcttggacaattgcaac
aaccgaggccgctgtgagaacggacagtgtgtgtgtaacgaaggtttcacagggattgac
tgcagccaactacggtgcgccaatgactgcaacaatcagggacgctgcattgaggggcag
tgtgtgtgtgatgagggcttcactggagaggactgcagccaacgatcctgcctcaacaac
tgcaacaacctgggccgctgtgttgatggacgttgcatctgtgataatggatacattggc
gacgactgctctgatgtatcccctccaagtgacctgactgtaacaaatgtgacagataag
actgtcaatctggaatggaagaatgaaaatctagtcaatcaatacctcatcacctatgtt
cctaccagtatcggtggcctagatatgcagttcacagtgcctggaaaccagacatctgcc
acaatccgtgaactggagccaggggtggagtactttatccgtgtctttgccatcttaaag
aacaagaaaagtattccaatcagcgctagggtagcaacctatctgcctgctccagaaggc
ctgaaatttaaatcggttagggagacatctgtacaggtagaatgggatcctctgaacatt
tcttttgatggatgggagcttatcttccgaaatatgaaaaaggaagataatggagacata
accagaagtttgacgaggcctgagacatcatatatgcagccaggcttagcaccgggacaa
cagtataatgtatctctgcatatagtgaaaaacaataccagaggacctgggctctccaag
gtgataaccacaaagcttgatgctcccagccagatagaggcaaaagatgttactgacacc
actgctttgatcacgtggttcaaacccttggctgaaattgatggcattgagcttacatat
ggccccaaggatgttcctggggacaagacaacaattgacctctctgaagatgaaaaccag
tactctattggagatctgaagccattcacagagtatgaagtggtgctgatctcccgccgt
ggagacatggaaagcgaccccatgagtgaagtctttctcacagatctggatgctccaaag
aacctgaagcgcgtgtctcagacagacaacagcatcaccttggagtggaaaaagagtcaa
gcagatatcgatagctacagagtcaagtttgccccaatctcaggtggagaccatgctgag
atcactgtgccaaaaagcaatcaagccacaaccaaggctacgctcacaggtttgaggcct
ggaactgaatatggcattggagttacagcagtgaaggaggacacagaaagtgctcctgct
actattaatgctggaactgacctggatagtcccaaggacctgggggtcaacaatcccact
gaaactagcctctccctgagctggaggagaccactggccaagtttgatcgctaccgtctc
acttatgttaccccctctggaaggaagaatgaagtagagatcccagcagatagcacctcc
tacatcctgcaaggactcgatgctggtacagaatataccaccagcctgatagcagagaaa
ggcaggcataaaagcaaacccacaactgtcaaaagttctactgctgtatatagtctagaa
ctaatgcagggagcaactcctggcccagatgagcactcaggcttctggagctctcctgct
cctgaggcttctgggatgtgggaggctacgctgtgggaccttctggtctccaatgtaaca
gaccatggctttggtctctcgtggaaggcggatgcaggagcctatactagttttgtggtg
gagtatgaggaagtgacattggcagctgggccccctgcagaggtcttcatgcccggagaa
tccttaggtgctgtgattgatggcctccaggctaacgccacctataaagtcaaggtgtat
ggaatggcgggaggacagcgctcccatcctctggaagctgtggctacaacagcacttcta
gtgacagcacctggagaatcaaacaatgaaacttcatttaattctacctaccctgcacct
actgagctaagttacttaacaattccaagcactgattctcacactgttctgtcagcgccc
actgcctttttcatctcagatgtcactgcccaacttcacgatctaaaagtaacaggcagg
acattcagtagtttcaccctaacatgggcagcacaagatgaggtatttgatcagttcttt
atcactctgaaagacctgtccagtttaaacagaacactggaaatctttctgccaggaagc
caacgagaaacagaatttaccaatctcacagctggcacacaataccagattaacctccat
ggaagtgctcgaggtcagctgtctcagtcactggaagctataaccaacacagcggaggaa
cctgagcttggaaatttaacagtatcagaggttagctgggatggtttccaacccacgtgg
acagcagcagacggggcctttgagacttttgtccttcaggtgcaggagtctgacaatcca
gaagaagttcagaatcatacagtcccagggggactgcgttttgtgaatattactgctctc
aaggattacacacgttacaatatcaccctgtatggtgtgattcagggctacaggaccaaa
cccctttccgctgaaaccacgacagcaatgcgcgcagaagttggtgagctaaacgtttcc
ggcattactccagaaggcttcaacctttcctggacagccactgaaagggccttcgagatc
tttaccattgaaattattaattctaacaggtttttggagcccatggagtacaacatctca
ggcaatttaagaactgctcatatctcagggctatcccccagcactgattatattgtctac
ctctatgggatcactcctggtttccgcacacaggcaataagtgttgctgttactacagta
gatgaacctctccttagcaaactaactgtgtcaaacgctacctcaaacagtgtgtctctc
acgtgggaagcacaggacactgcctttgatcactttgttttagaagtcagaaactctgac
ttgcctttggactccctggtgcacacagtgtcaggggcttcaagaagttttgtaatcacc
aatctaagagctgccactaattacactgtccaactccatggtctagttgatgggcaaagt
ggtcagactttgacagcagtggcaactacagaggctgagccacagctgggcacgctaaca
ctcacaaacgttacccccgacagcttcaacctctcatggaccacaagaaatgggcctttt
gcaaagtttgttataaatgttagagattcctattcagcacatgaacctcaggagcttaca
gtctcgggaggtgcccgcagcgctcacatctcaggcctggtagattacactggctatgac
attaatattaagggcaccaccagtgcaggtgtccacacagagcccctcactgcttttgtc
atgacagaggccatgcccccactggaaaatctaactgtctctgacattaacccttatggg
ttcacagtgtcctggatggcatcggagaatgcctttgacaactttctagtaatcgtggtg
gattctggcaagctgctggacccacaagagttcctccttacaggaacccagcggcatctg
aagcttaaaggccttattactggcattggctatgaggttatgctttatggttttgccaag
gggcgccaaacaaagcccctaagcattgtggccattacagaagcagaacctgaggtcgac
aacattctggtttcagatattaccccagatggcttccgtctttcctggactgcagatgat
ggggttttcgacagcttttttattaaaatcagggataccaaaaagcagtctgatccatgg
gaacgtatagtaccaggtcatgaacgcacccaagatataacagggctgaaagagggtact
gagtatgaaattgaactctatggaattatcagtggacgacgttcccaacccataaatgca
atagctatcacagccatgggatctcccaaaggaatcaatttcactgacatcactgaaaac
tcagctacagtcacctggatgcttccaagaacccgagtagaaagtttccggattctctat
gcccccaaaactggaggtactcctaatattgtgacagtagatggaaccaagactaggacc
aagttggtgaaactggtccctggtgtagaatatgttgtcaacatcacctctgtcaaagga
tttgaagaaagtgaacctgtctctggacctctgaaaacagctctggacagcccatctggc
ctagtggtggtgaatatcacagattctgaggccttagcaacctggcagccagcaattgct
gctgtggacaattatgtcatctcctatatttccgagacggagccagaagtgaagcagatg
gtgtctgggaacactgtggaatatgaccttaatggccttcgacctgcaactgagtatgta
ctgaggctccatgctgtagaggatggtcagcagagtgcaactatatccaccaaatttact
acagggatggatgctccaagagatctacgcgctattgatattcaatcagaaacggcagta
ttgacatggaggcctcctcgtgcttctctcactggctatctcctaatctacgagtctgct
gatggcaaagtcaaggaagtcatcctggtacctgagacaacttcctatgatttgactgag
ctgagcccatccactcagtacacagtgaaactgagggcactgcatagatccctgaagagc
aacatcatccagactgttttcacgacaagtggacttctctatcctttccctaaagactgc
tctcaagctctattgaatggagaaactgcctctggactctacaccatttatctgaatgga
gagaagtctcagccactggaggtgtactgtgacatgggctctgatggaggtggatggatt
gtgttcctgaggcgccgtaatggaaaagaggatttctacaggaattggaggacatacagt
gctggctttggtgatcccaaggacgagttctggatcggcctggagaatctccacaaaatc
acctctcagggccagtatgaactgcgtgtggatctgcgagacaagggcgagacagctttt
gctatctatgacaagtttagcgttggagactccaagacccgatatcggctaaaagtggat
ggatacactggcacggcaggtgactccatgacatatcacaatggacggtccttctctacc
tatgacaaggacaatgactttgccatcactaattgtgctttgtcatacaagggtgctttc
tggtacaagaactgccaccgggtcaatctgatgggcagatatggtgacaacagtcacagt
cagggtattaactggttccattggaagggccatgaatattccattgagtttgcagaaatg
aagttgagaccctccagcttccggaacctagaaggaagacgaaagcgagcataa
DBGET
integrated database retrieval system
