Alligator sinensis (Chinese alligator): 102379968
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Entry
102379968 CDS
T02922
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102379968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102379968
Membrane trafficking [BR:
asn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102379968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
Clathrin
TPR_Vps41
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
ANAPC4_WD40
DUF5770
EIF3I
Motif
Other DBs
NCBI-GeneID:
102379968
NCBI-ProteinID:
XP_025072626
UniProt:
A0A3Q0HKX6
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MEKMADELKTETENLNPEQSMSSTGLEDDLGKLLGQETLLPKLGSIDLERELDAKSELID
DKEFNIPQVDTPPTLESILNETDDEEETFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDR
AHMKRKKRLPDSFSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHG
LALIFGKDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKL
LRSITDAHPPGTAILHVKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKG
EVCCIEPLHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPL
LAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDSGAIHVTKQKQLHLHYDLINFTWMNSR
TVVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSQALALVGEKAC
YQSISSCGSQIFYLGTKSVHVMTLRSWRERVDHLLKQECLTEALALAWSFYEGKAKAVVG
LSGDVGKRKAVIADRMVEILLHYTDRTLKKCPDQGKIQVMEQHFQDMVPVIVEYCLLLQR
TDLLFSQVYDKMSENSVAKGVFLECLEPYILSGKLIGMTAQVMKDLLLHFQDRNLLENME
ACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGMNDFLSPMERLFKVIAPPLSAGKS
LTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASTDEEV
YPYVHTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGC
LFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEE
NRLIQMAEKAEFYQICEFMYEREHRYDRIIDCYLRDPVRKEDVFNYIHNILSIPGYSAEE
KHSVWQKALEHMEELLLLSPSKAADLITTHFNDQLEGIINNLQDQFLLFQFLRSLLDPRE
GINQDLIHVSPCITEQFIELLCHYSPDQVLEMLQVLEFYRLEETIQITQKHQLHEASSYL
LEKKGDVHGAFLVMLEQLQSKLLVLTQEDENSTQSNSIKDIEATLLKTIALCQRNSHNLN
QQQREALWFPLLEAMMSPQKLSGSSASCRYSEHLKNLTMQVLNNMAAFIALPSILQRILQ
DPVYGKGKLGEIQGLVLGMLDTFNYEQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatggcagatgaattgaagacagagactgaaaacctcaatccagaacagagc
atgtcttccacaggactggaagatgaccttggcaaactcttgggtcaggagacacttctc
ccaaagttgggcagtattgatctggaaagagaactagatgccaaaagtgagctgattgat
gataaagagttcaatattcctcaggtggataccccaccgacgctggaaagcatattgaat
gagactgatgatgaagaagagacttttgtgctggaggatccctcacttttgaacattgat
aatatcgacacacactcttacgacacgtcttcagtggcgagctctgacagtggagaccgg
gcacacatgaaaagaaagaaaaggctccctgattctttttctctccatggatctgtcata
cgactttcacttctgaaaggaatttctgcccaaatagtttctgctgcagacaaagtggat
gctggcttgcctactgccatagcagcatcaaatctgattgctgtggggacttctcatggg
ttggcattaatttttggaaaagatcagaaccaggctcttcggctttgtcttggcagcaca
gctgttggtgcccagtacggggctatctcagctctcagtatcaataatgactgctcgaga
cttctgtgcggctttgcaaaaggacagattactatgtgggatctggctagtgggaaactt
ctgagatcaataacagatgctcatcccccaggaacagccattttgcacgtcaagttcaca
gacgacccgacccttgcaatttgcaacgacagtggaggctctgtcttcgaactgtcattt
aagagagtgatgggagtgagaacctgcgagtctcggtgtctgttcagcggatccaagggg
gaagtttgctgtattgagcctttgcatgcaaagacagaactgagagatcatcctattacc
cagtactccctgctagcaatggcctccttgactaagatccttgtcattgggttgaagcca
tctctgaaagtgtggatgacttttccatatggtcgtatggatccctccagcgttcctttg
ctggcttggcactttgttgctgtacagaactcggtaaaccccatgcttgccttctgtcgt
ggagatgtggttcattttcttttggtaaagagagatgattcgggtgcaatacatgttact
aagcagaagcagctccatctgcattacgacctcatcaattttacttggatgaattcgcgc
acggtggtgcttctggatagcgtggagaagctccatgtgatagatcgccagacgcaagag
gagttggagaccatagagatttcagaggttcagctagtctacaacagcagtcacttcaaa
tcactggccacagggggcaatgtcagccaggctctggcactggttggggaaaaagcctgc
tatcagtccatcagcagctgtggcagtcagattttctaccttggtacaaagtccgttcat
gtgatgacactaagaagctggagagagagagtggatcaccttctgaaacaagaatgtctt
actgaggccctggctctagcttggtctttttatgaaggtaaagcaaaggctgttgtaggg
ttgtccggagatgtcggcaagcgaaaggcagtcattgcagacagaatggttgaaatcctt
ctccattacactgatcgaactttgaagaagtgtcccgaccagggaaaaatccaagtgatg
gaacaacattttcaggacatggtgcccgtcatagtcgagtactgcctcttacttcagcgc
acggatcttttattcagccaggtgtatgacaagatgagtgagaattctgtggccaaaggg
gttttcctggagtgcctggagccatacattttaagtggcaagctgatcggaatgacagct
caagtgatgaaagacttgctgcttcacttccaagataggaacctgttggagaacatggag
gcctgcattgtgcacatggatatcaccagcctcgacatacagcaggtagttcttctttgc
tgggaaaatcatctctatgatgccatgatctatgtctataacagtggaatgaatgacttc
cttagtccaatggagaggttgttcaaagtcatcgctcctccactgagtgctgggaagtct
ctcacagatgagcaggtcgtgatgggcaacaagcttctagtttatataagctgctgtttg
gcaggtcgtgcttacccgttgggtgatattcctgaagatctggttcccttggttaaaaac
caggtctttgaatttcttatccgcctccactcagccgaggcatccactgatgaagaagtt
tatccctatgttcatacactgctgcacttcgacacccgggagttccttaacgtccttgca
ctgacttttgaagatttcaagaatgacaagcaagcagtggagtatcaacagagaatcgtg
gacatcctgctaaaagtcatggtggaaaattctgacttcaccccatcgcaggttgggtgt
ctctttaccttccttgctcggcagctcgccaagcccaacaacacgttgtttgtgaacagg
acactttttgatcaggtccttgaatttctgtgcagtcctgatgatgattcccgacactcc
gagagacagcaggtcttgttagaactgctgcaggctgggggaatagtacagtttgaagag
aaccgtctcatccaaatggcagaaaaagctgaattctaccaaatttgtgagtttatgtat
gaacgggagcatcgctatgaccgaatcattgattgttacctgcgtgatccagtgagaaag
gaagacgttttcaactacatccacaatattttgtccattcctggatacagtgcagaggag
aagcattcagtgtggcagaaagctctggaacatatggaggagctgcttttgctgagccct
agcaaagctgcagacctgatcaccacgcacttcaatgatcagcttgaggggatcattaac
aaccttcaggaccagttcttgcttttccagtttttgaggagtcttcttgacccgagggaa
ggaatcaatcaggatctgatccacgtatctccctgcatcactgagcagttcattgagttg
ctgtgtcactacagtcctgaccaggttttagagatgctacaagtcctggagttctacaga
ctggaggaaaccattcagatcactcagaaacaccaactccatgaagcttcctcatacctt
ttggaaaagaaaggagatgtccatggtgccttcttggtaatgcttgagcaactgcaaagc
aagctgctggtgcttacacaggaagatgaaaattcaacacaatccaattcaataaaggat
attgaagctaccttactgaaaacaattgcactttgccagaggaattcacataatttaaac
cagcagcagcgagaggctctctggtttcccctcctggaggctatgatgtcgccacagaaa
ctgtcaggttcttcagcctcatgccgatactctgaacatctgaagaatttgaccatgcag
gtgctcaacaacatggctgcttttattgcccttccatcaatcctgcagagaattctacag
gatcctgtttatggtaaagggaaacttggagaaattcagggacttgtactggggatgctg
gatacgtttaactatgagcag
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