KEGG   Alligator sinensis (Chinese alligator): 102380454
Entry
102380454         CDS       T02922                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102380454 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asn03041]
    102380454 (PRPF38A)
Spliceosome [BR:asn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102380454 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc GIP4
Other DBs
NCBI-GeneID: 102380454
NCBI-ProteinID: XP_006035238
UniProt: A0A1U7SGF5
LinkDB
Position
Unknown
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHKERVCDIILPRLQKRYVLEEAEQLETR
VSALEEDMDDVESSEEEEEEDEKMERAPSPDHRRRGYRDLDKPRRSPTVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaaccggactgtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaaaatcatccgcacgcgcatctacgagtccaagtactggaaggaggaatgcttc
ggcctcaccgcggagctggtggtggacaaggccatggagctgaagtacgtcggcggcgtg
tacggggggaacatcaagcccacgcccttcctgtgcctgaccctgaagatgctgcagatc
cagcccgagaaggacatcatcgtggagttcatcaagaacgaagacttcaaatatgtcaga
atgcttggtgcgttatacatgagattgactggcactgccatcgactgctacaagtacctt
gagccactgtacaatgattatcggaaaataaagagtcaaaatagaaacggggaatttgaa
ctgatgcacgtggacgagtttattgatgaactgctccataaggaacgtgtttgtgatatc
attttacctcgattgcagaaacgttatgtcctggaagaagctgaacaactagagactcgg
gttagtgcactggaagaagatatggatgatgtagagtctagcgaggaggaagaagaggag
gatgaaaagatggagagggcaccctcccctgatcatcgcaggagaggctacagagatttg
gacaagccacgcagatctccaactgtgagatacaggaggagccgaagcaggtctccacgc
aggcgaagccgctcacccaagaggagaagcccatcgccacgccgggagaggcatcgcagc
aaaagcccaaggcgacaccggagcaggtctagggagagacgccacagatcaagatctaaa
tctccagggcaccatcgtagtcatagacacagaagtcattccaaatcacctgaaagatcg
aagaaaagccacaagaagagtcgacgagggaacgaataa

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