KEGG   Alligator sinensis (Chinese alligator): 102380627
Entry
102380627         CDS       T02922                                 
Symbol
NBN
Name
(RefSeq) nibrin isoform X1
  KO
K10867  nibrin
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03440  Homologous recombination
asn04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102380627 (NBN)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    102380627 (NBN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asn03032]
    102380627 (NBN)
   03400 DNA repair and recombination proteins [BR:asn03400]
    102380627 (NBN)
DNA replication proteins [BR:asn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    102380627 (NBN)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     102380627 (NBN)
    BRCA1-C complex
     102380627 (NBN)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA BRCT RTT107_BRCT_5 zf-CCCH_9 PTCB-BRCT
Other DBs
NCBI-GeneID: 102380627
NCBI-ProteinID: XP_014373993
UniProt: A0A1U8CY58
LinkDB
Position
Unknown
AA seq 717 aa
MVSPPESNLSQSVTVPVLTVKDTSKYGTFVNGEKLLSETSRTLKSGDRVNFGVFESKFRI
EYEPLIVCSSCLDVCGKTALNQAILQLGGLVVNEWTEKCTHLAMVSVKVTVKTICALICG
RPIIKPDYFVEFIKSVQAKQQLPTPESFYPPVDEPSIGTEKVDLSMCHERKTIFRGKTFM
FLNAKQHKKLSPSVILGGGEAKLMTEESKDISLLVAPNVCVIDVGLTDTQAPASESARNW
IKSIMTVLQSKDLRPIPEAEIGLAVIFGSTERYCNPQNQTVKVIKPATPAANLLGSSISQ
SLIVEETVPTATNNDSVYVADTEPEDLTDSCMEIDKTQMNRKGKTNVQDITTVKETPNTS
GNANVGILFSRIDKIPEFDQQSLSLSPFKTSEVGKKRERASQQQLNSIKNYFQTATKKRE
RKEEEEEVSSVPKLAKLEDKSLPSSSHTQPKTSSTWKSKIEQPQREQYTLDPKTNLLHID
TGIKCATESRKSESDKTAAKNISSTKPVSSKRKEQDDLIEDTDTLEVVFGSKQLDWEDNV
EDPGIEHQANTQKKRRLETDENRIEKENVTRNEGSRILENEFGCVLTSETENKIKQESSM
LSHDKLHDDSHSLPSKLLLTEFRSLVVSHPRPNAQITAKNNYGELKNYKKFKKVAYPGVG
QLPHIIGGSDLIAHNAKRNSELEEWLRQEMEEQNRHEKEESLADDLFRYDPHVKRRR
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggtcagtcctcctgaatctaaccttagtcaatcagttacagtccctgttttgacagta
aaagatacttctaaatatggtacctttgttaacggagaaaaattattgagtgaaacttca
agaactttaaagtcaggtgacagagtcaattttggagtcttcgaaagcaagtttagaata
gaatatgaacctttgattgtctgctcctcctgtttagacgtctgtggaaaaactgcttta
aaccaagccattctgcagcttggaggccttgtagtgaatgaatggacagaaaaatgcact
cacctggctatggtatcagtgaaagttactgtgaagactatatgcgctctgatttgtggt
cgaccaattataaagccagactactttgttgaattcatcaaatctgttcaggccaagcaa
cagctgccaacaccagaaagcttttatcctccagttgatgagccctctattggcactgaa
aaagtggatctgtctatgtgtcatgaaagaaaaaccatcttcagagggaaaacctttatg
ttcctaaatgctaagcagcacaagaaactgagtccatctgttattcttggagggggagaa
gcaaaacttatgacagaagagagtaaagacatttctttactggtagctcctaatgtttgt
gtcattgatgtaggattaacagacacacaggccccggcatctgagtctgcaagaaattgg
attaaatctattatgacagtgctacaaagcaaggatctcaggcctattccagaagcagag
attggattagcagttatctttgggtccacagaaagatactgtaatcctcaaaaccaaact
gtgaaagttataaagccagctactcctgcagcaaatcttctcggatcctccatttctcaa
agtttgatagtagaggaaacagtgcctactgctacaaataatgactctgtatatgtagct
gatacagaaccagaagacctgacagactcatgcatggagatagataaaacacaaatgaac
agaaaaggcaaaacaaatgtacaggatataactactgtaaaggagactcccaacacaagt
ggcaatgcaaatgtggggattttattctccaggattgataaaatacctgagtttgaccaa
caaagcttgtcactctcaccttttaaaacttcagaagttggtaaaaaaagagaacgagca
tcacagcaacagctgaactcaataaaaaattacttccagacagctacaaagaaaagggaa
aggaaggaagaagaggaagaagtttcttctgtgcctaaactggcaaagttggaagacaag
tcactgccttcttccagtcatacccaacccaaaacttcctcaacatggaaaagcaaaata
gaacagcctcaaagagagcaatataccctggacccaaaaacaaatcttttacatatagac
acgggtataaagtgtgcaacagaaagtagaaaatcagagagtgataaaactgctgctaaa
aatatttccagtacaaagcctgtatcaagtaagagaaaagaacaagatgacttaatagaa
gatacggataccctggaggttgtgtttgggagtaaacagctagattgggaagataacgtg
gaggatcctggtattgagcatcaagccaacacacagaaaaaaaggcgcctggaaactgat
gagaacagaattgaaaaagaaaatgtaacaagaaatgaaggcagtagaatattggaaaat
gaatttgggtgtgttctgacttcagaaacggaaaataagatcaagcaagaatcatcaatg
ttgagccacgacaaacttcatgatgattctcacagtttgcccagcaaactcctgttgact
gagtttagatcactggttgtcagccatccaagaccaaatgctcaaatcactgcaaaaaac
aattatggggaactgaaaaactacaagaaattcaaaaaggtagcttatcctggagtagga
cagcttccacacattattggaggatctgatcttatagctcataatgccaaaaggaattca
gagttagaagaatggttaaggcaggaaatggaggaacagaatcggcatgaaaaagaggaa
tcacttgcagatgatctctttcgatatgatcctcatgtgaaaaggagaagataa

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