Alligator sinensis (Chinese alligator): 102380767
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Entry
102380767 CDS
T02922
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04382
Cornified envelope formation
asn04510
Focal adhesion
asn04512
ECM-receptor interaction
asn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102380767 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102380767 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102380767 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102380767 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asn04147
]
102380767 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
asn00536
]
102380767 (COL4A6)
Exosome [BR:
asn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102380767 (COL4A6)
Glycosaminoglycan binding proteins [BR:
asn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102380767 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102380767
NCBI-ProteinID:
XP_014380121
UniProt:
A0A1U8DII1
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MSGGSSMRARAALLLALGLAAELVAAGGKKPYHGPCGGRDCSAGCKCFPEKGARGRPGPI
GTQGPIGAPGFTGPEGLPGAKGEKGAMGPSGPAGQKGDKGPMGVPGFQGINGVPGHPGQP
GPRGLPGLDGCNGTIGSPGVRGEDGLHGIQGPPGRPGLKGAKGEPAYAQGGPKGMKGENG
LPGLDGISGPKGLPGPAGSAGSIGLPGLQGPRGLLGLPGPKGNMGLGFQGEKGEKGDVGL
PGPPGPPPSTGILEFMGFPKGKQGDQGEPGPKGFPGIIGLPGLPGIGGVGEKGEKGVPGL
PGSRGFSSLDGSDGIPGRKGHPGIPGFPGLDGAEGMKGELGDPGPPGPPIYLDGKGVVIS
GFPGDPGTPGIPGPQGDKGISGLPGLPGAAGVTPFDPDSAGPMGIPGTSGLKGEPGVPGK
VTFGLPGTPGSDGLPGLPGPPGLPGVLRPGQLPDMILEGEPGKPGVPGQRGPPGTTGQRG
YKGEPGDCACDGGVNIPGPRGETGLPGLPGSPGRPGPKGSRGDSGTVGVPGPRGPVASSG
QPGPPGPKGEKGEPYFTTDGGIRGDPGVIGPRGPSGIPGTPGQDGLPGLPGRPGPPGDDG
LGFPGEKGLPGLPGPKGRHGESGPPGIGFPGPIGVRGSPGDPGIDGYPGQPGLPGPPGDC
CCGEEVGKGVLDTEGGITLPCVFPGAFGNPGSPGHPGLPGRKGSKGFPGISGQPGSNGSK
GQLGSPGLVGPPGVPGFPGIRGDQGPQGLPGLDGTDGLPGKAGTPGLAGAKGALGEVIDA
ESGALGEPGRPGFPGDKGLAGEPGFPGLKGVDGRPGLLGIKGEQGNLGLPGIVGVRGPPG
PGGPFGIKGKPGTAGTVGLRGSPGCQGLPGAQGPMGDAGPPGPAGMKGFPGLDGVLGPPG
ERGFLGPPGPSGRDGRPGFPGRKGEKGSPGLIGFPGMPGPSGNPGLSGLKGSLGTTGRKG
NAGIPGTSGLKGDRGDPGPPGPPVQKPQELVLALKGDKGYPGLAGLEGFPGPRGDKGFPG
TRGKPGLPGSRGLPSRERGLAGDPGLPGSFGQPGFPGQRGVAGILGFPGMPGESGSEGIS
GAPGFPGTTGSIGPKGDRGESLGIPGEPGAKGERGNPGFPGERGKEGPKGEPGYPGSTGT
NGLKGVPGDLGLQGPPGIPGNAGLRGNTGLPGLPGQPGSVGFIGLLGVVGPKGFPGFPGL
NGLNGLPGTKGSPGTPGLSEPGLQGPAGLPGPKGEEGPPGTGIGAPGLPGLKGSSGDMGP
PGPVGLPGLPGALGISIPSDIPGRRGDPGRPGVSGSPGLPGPPGPPGPPGPASDQGDTGI
PGVPGVSGLPGPKGDMGLPGPVGIPGASGLKGAQGEPGFMGMPGKDGFPGDAGHPGLKGD
TGRRGPPGLPGAPGLTPKPEEVVVPPGIIGLPGIDGVPGFAGDPGFQGPLGKQGPKGLPG
RSGLKGRDGLSGPHGIVGDPGSPGIPGQQGYEGVSGKPGPIGLPGMPGRSISVGYTLVKH
SQSEQIPPCPIGMNKLWDGYSLLYVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVC
YYASRNDKSFWLSTTAPIPMMPVTSFQIAQYISRCSVCEAPSQAIAIHSQDITIPQCPAG
WRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFW
LTTVEQNQQFVGAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcagcagcatgcgcgcccgggccgcgctcctgctcgctctcgggctcgcc
gcggagctggtggccgcgggtggaaagaaaccctatcacgggccatgtgggggccgagat
tgcagtgcgggctgcaaatgctttccagagaaaggtgctcggggtcggccagggcctatt
gggacccagggacccataggtgctccaggatttactggaccagaaggcttgccaggggcc
aaaggtgagaaaggggcaatgggcccttctggaccagctggacagaaaggagataagggc
ccaatgggagttcctggatttcaaggcatcaacggggttccagggcaccctggccaacca
ggacccagaggtctacctggccttgatggctgtaatggcactattgggagtcctggtgtt
cgtggggaggatggacttcatggtatacaggggccacctggccgccctggtctaaaaggt
gcaaaaggagaacctgcttatgctcaaggtggccctaaaggaatgaagggtgaaaatggt
cttcctggattagatgggatttctggtccaaaaggtttgccaggcccagcaggttctgca
ggatctataggattgccaggcttgcagggtccacggggtctactggggctaccaggacca
aaaggtaacatgggattaggtttccagggggagaaaggagaaaagggagatgtaggactg
cctggccctccaggtcccccaccatccactggcatcctggagttcatgggatttcctaaa
ggcaaacaaggggatcagggtgagccaggcccaaaaggattccctgggattataggactg
cctggtctgccgggtattggaggtgttggagagaaaggagaaaagggtgtccctggtttg
cctggcagcaggggcttttcatctttggatggatctgatggaattccagggagaaagggt
catccagggatcccaggctttcctgggcttgatggagcagaaggaatgaagggtgaatta
ggtgatcctggtcctccaggtccacccatctatctcgatggtaaaggtgttgtcatctca
ggtttccctggagatcctggaactccaggaatcccaggccctcaaggagataaaggaatt
agtggcttaccaggccttcctggtgctgcaggagttacaccctttgatccagattcagca
ggccccatggggattccaggtacttcaggactgaagggtgaaccaggggtcccaggcaaa
gtaacatttggattaccaggcacaccagggagtgatggccttccaggtctgccaggacct
ccaggattgcctggcgtactacgccctggacagctaccagacatgatattggagggagag
cctggaaaaccaggagtacctggacaacgggggccacctggaactacaggtcaaagggga
tacaaaggagaaccaggtgattgtgcttgtgatggaggagtaaacatacctggccccaga
ggtgaaacaggccttccaggtttaccaggaagtcctggcagacccggaccaaagggctcc
agaggagattcaggcacagtgggtgtcccagggccacgaggcccagtggcttcatctgga
caaccaggtcctccaggtcccaagggagaaaaaggggagccatattttacaacagatggc
ggcatccggggggatcctggtgtgataggacctagaggaccttctggtatcccaggaact
ccaggccaagatggtctcccaggcttgccaggtcgaccaggacctccaggtgatgacggc
ctaggttttccaggtgaaaaaggtctgccaggattacctggtcccaaaggccgtcatggg
gagagtggtcctcctggcattggtttcccaggtcctattggagttcgtgggtctccaggt
gacccaggaatagatggatatccaggacagccaggtcttccaggtcctccaggtgactgc
tgctgcggtgaggaggttggtaaaggagtcttagacacagagggaggtatcaccttaccc
tgtgtttttcctggagcatttggtaaccctggatctccgggccacccaggattaccaggt
cgcaaaggcagcaaaggatttccaggtatttcaggccagcctggatcaaatggatcaaaa
ggacaactaggttctcctgggttagtaggaccaccaggtgttccaggctttcctgggatc
cgaggagatcagggcccacagggacttccaggacttgatgggacagatggtttacctgga
aaggcaggaaccccaggattagcaggtgcaaaaggagcccttggtgaagtgattgatgct
gaaagtggagctctaggtgagcctgggaggcctggattcccaggagataaagggcttgcc
ggggagcctggatttcctggactgaaaggtgtggatggaaggccaggcttactgggcatt
aagggcgaacagggtaatcttggccttccaggcattgttggagtgcgaggacctcctgga
cctgggggtccatttggcattaaaggaaaaccagggacagctggaacagttggcctcaga
ggatcaccaggctgtcaagggcttcctggagcacaaggaccgatgggtgatgcaggtccc
ccaggccctgctggtatgaaaggcttcccaggtcttgatggtgttctaggacctcctgga
gaaagaggattcctagggccacctgggccttctggtagagatggacgtccaggcttcccc
ggacgaaaaggtgaaaagggctcccctggtctgattggcttccctggcatgccaggccca
tctggcaaccctgggctgagtggtttgaaggggagtcttggtacaactggcaggaaagga
aatgctggaattcctggaacctctggtctaaaaggtgacaggggtgaccccggtccacct
ggtccccctgttcagaagcctcaagaactggtgctggcattaaagggagacaaaggatat
cctgggttagctggactggaaggattcccaggacctagaggtgataaaggattccctgga
acccgggggaaacctggtctgcctggttcacgtggtctgccaagcagggagagaggctta
gcaggtgatccaggtctccctggctcctttggacagcctggctttcctggacagagagga
gtagctggtatcctaggattcccaggaatgcctggggaaagtggttcagagggtatctcg
ggagcaccaggattcccagggactactggctccattggaccgaagggtgatcgaggggag
tcacttggaattccaggtgaaccaggagctaaaggagaacgagggaatcctggatttcca
ggtgaaagagggaaagaaggaccaaagggagaaccaggatacccaggaagcactggaacg
aatgggcttaaaggagtcccaggggaccttggccttcaaggaccaccaggaatccctgga
aatgctgggctgagaggaaacacaggccttccaggtcttccagggcaacctggttctgta
ggattcatcggacttcttggggttgtggggccaaaaggttttcctggatttccaggctta
aatggtctgaacggattgccaggcacaaaagggtcacctggaacaccaggcttaagtgaa
cctggattgcaaggccctgcaggacttccaggtcccaagggtgaagaaggtcctccagga
actggcataggagctccaggactccctgggctgaaaggatcctcaggagacatgggtcca
cctggccctgtggggctgcctggtctaccaggagctcttggcatctctattccttctgac
atacctgggagacggggtgatcctggccgtcctggagtcagtgggagtccaggtcttcct
ggcccccctggccccccaggacctcctggcccagcctctgatcaaggtgatacaggcatt
ccaggtgtccctggtgtttctggtttgccaggcccaaaaggtgacatggggcttcctggg
ccagttggaatcccaggagcttcaggactcaaaggtgcccagggagagccaggttttatg
gggatgccagggaaagatgggtttccaggggatgctggtcaccctgggctgaaaggtgac
actggccgtcgaggtcccccaggtctacctggtgctccaggcctaacaccaaagccagaa
gaagttgtagttccccctggtataataggtctgcctgggattgatggtgtccccggtttt
gctggagatcctgggtttcagggaccacttgggaagcaaggtccaaaaggtttgccaggc
agatctggtctgaaaggacgtgatggtttatctggaccacacggcatagttggagatcca
ggatctccaggtatcccaggacaacagggatatgaaggtgtctctggaaagcccggccct
atcggtttgcctggaatgcctggtcggagcataagcgttggatacactttagtgaaacac
agtcagtcagaacagatcccaccatgcccaataggaatgaataagctctgggatggttac
agcttgttatacgtggaggggcaggaaaaggcgcataaccaggaccttggttttgctggc
tcctgtttgcctcgcttcagcaccatgccatttatttactgtaacattaatgaagtgtgc
tactatgccagtcgaaatgacaagtccttctggctctccaccactgctcccatccccatg
atgcccgtgaccagtttccagattgcacaatacatcagtcgttgctcagtatgtgaagca
ccttcccaggctatcgccatccatagccaggacataaccattccacagtgccctgctggc
tggcgcagcctttggattggatactctttcctcatgcacacagcagctggtgcagaagga
ggaggccagtcccttgtctcacctggctcttgcctggaagatttccgtgctactcctttc
atcgaatgcaacggcgccagaggaacctgccattattttgcaaacaagtacagcttctgg
ctgacaactgttgagcagaaccagcagtttgtcggtgctcctccctcagaaactctgaaa
gcagggcagcttcgaacacgagtgagccgttgccaagtatgcatgaagaacttgtag
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integrated database retrieval system
