Alligator sinensis (Chinese alligator): 102380825
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Entry
102380825 CDS
T02922
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03030
DNA replication
asn03410
Base excision repair
asn03420
Nucleotide excision repair
asn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102380825 (RFC5)
03410 Base excision repair
102380825 (RFC5)
03420 Nucleotide excision repair
102380825 (RFC5)
03430 Mismatch repair
102380825 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asn03032
]
102380825 (RFC5)
03036 Chromosome and associated proteins [BR:
asn03036
]
102380825 (RFC5)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102380825 (RFC5)
DNA replication proteins [BR:
asn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102380825 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102380825 (RFC5)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102380825 (RFC5)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102380825 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102380825 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_11
AAA_22
AAA_assoc_2
AAA_24
AAA_14
RuvB_N
DEAD
ResIII
DUF815
DNA_pol3_delta
AAA_5
AAA_19
PhoH
ATPase_2
TIP49
AAA_7
TniB
AAA_30
nSTAND3
bpMoxR
T2SSE
Mg_chelatase
AAA_3
Thioredoxin_6
AAA_25
AAA_18
AAA_2
Gp44_lid
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
102380825
NCBI-ProteinID:
XP_006027428
UniProt:
A0A1U7SB46
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MEPVAVRPPPGKGRNLPWVEKYRPQTLSDLISHQDILSTIQKFISEDRLPHLLLYGPPGT
GKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVIL
DEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVP
RVQHVIDEEKVDITDDGMKALVTLSSGDMRRALNILQSTSMAFEKVTEETVYTCTGHPLK
SDIANILDWMLNQDFTMAYKRIMELKTLKGLALHDILTEIHLFVHRVDFPASVRTQLLIK
MADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtggccgtgcggccgccgccggggaagggccggaacctgccgtgggtggaa
aaatatcgtcctcagacactgagtgacttaatttcccatcaggacattctgagcactatt
cagaagttcatcagtgaagatcgtctgcctcaccttctcctctatggaccaccagggact
ggcaagacctccacaattctggcctgtgctaaacaactctataaagacaaggaattcaac
tccatggttttagagctgaatgcttcagatgaccgaggaatcgatatagtcagggggccc
attttaagttttgccagcacaaggacaatctttaaaaaaggttttaagcttgtaatcctg
gatgaagcagatgccatgacccaggatgctcagaacgccctgaggagagtgattgagaag
ttcacggagaacaccaggttttgcctgatctgcaactacctctccaagatcatccctgcc
ctgcagtccaggtgcacaaggttccgatttggccccctgaccccagagctcatggtcccc
cgggtgcagcacgttatagatgaggagaaggtggacataaccgatgatgggatgaaagct
ttggtgaccctctctagtggtgacatgcgcagagccctcaatattttgcagagcacaagc
atggcctttgagaaggtgacggaggaaaccgtgtacacttgcaccggtcaccccctcaag
tctgacattgccaatattctcgactggatgctgaaccaggacttcaccatggcctacaaa
agaatcatggagctgaagacactgaagggattggcactgcatgacatcctgactgagatc
cacttgtttgtgcaccgagttgacttcccagcctcagtccgaacccagctgctgatcaaa
atggcagacattgagtacaggctggctgctggcacaagtgagaagattcagcttagctcc
cttattgctgcttttcaggtcaccagagatctgattgtggcagaggcttag
DBGET
integrated database retrieval system
