KEGG   Alligator sinensis (Chinese alligator): 102381523
Entry
102381523         CDS       T02922                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:asn01009]
    102381523 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asn04121]
    102381523 (TRIM42)
Protein phosphatases and associated proteins [BR:asn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102381523 (TRIM42)
Ubiquitin system [BR:asn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102381523 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_J_second BORCS7
Other DBs
NCBI-GeneID: 102381523
NCBI-ProteinID: XP_006016598
UniProt: A0A1U7RAS3
LinkDB
Position
Unknown
AA seq 719 aa
MAESCHCCPPILTKEEECCLCWRFLFTEERNCNCFPCAYHEDRSCQCCHCTCSENPNCIW
CCCSFSTDEDCKCCCCATDENTVCQCYESTCCRNVAHSPYHPRIPRRNHSRLSLPGPGTR
SDTSVITLDKDVSGHSFRDQLTCPACKQLYLHPFMLPCKHCVCGDCIGKRRAKAEVSENF
FILICPVCNKAHCLPYSNKIQLKKNLLRAKLAKRYMQKHGLIRWRFDRTQTSIYCQACKE
KKRKASKRCLTCQMNFCKECLSLYHRDDSAQEHIFTKAYQEDQEQSNCLVHSSSPISEYC
VDDHELICDYCKNSLHSDHETLPLIVACSREAGALFNAIAKFKKVRYGVDNDLLETFVLK
NNFKSYKDTKRKEIRNGFLRLRSILHEREKEMMELLENLEFKKQRGITEYMEHASKKLAY
MDSLLQYSKEALKEENQIAFLQSSNSLVNEIEDAITNIYQPNPCLREDPIQNLKLNFEEL
STNLNGIFPTSVRIKQSDDKVNKYPYPCNSGIIVPKRVSSTHLSKPKIALQSPSLTSLYD
PNVLKKEMYGRPKSTPPLHPKQSNKMFACWDTSEISRKETSPSIIHSPEMFEDGSLTAPG
LVIIYQTLAYPKSAKIYWTCPTEDVDFFDVEFYEVIAVTTDNVIQTQLAGQLSGIKHQNL
EIHNLDPSTEYLFKVRAVNSNGTGQWSEICKVMTPDDRGKVQGRWGLLRSIQSSLHKEL
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcggaaagctgccattgctgtccaccgatcttaacaaaagaagaagaatgctgctta
tgttggcgttttttatttactgaagagcggaattgcaactgttttccctgcgcttaccat
gaagatcgatcttgccagtgttgccattgtacatgttcagagaacccaaattgtatttgg
tgctgctgctctttctcaactgatgaagactgtaagtgttgctgctgtgccaccgatgag
aataccgtttgtcagtgttatgaaagcacatgctgcagaaatgttgcccattcaccatac
catccaagaatcccaaggagaaatcattcaaggctgtctttgccaggccctggaactaga
agtgatacatctgtcattacattggacaaggatgtctcagggcatagttttcgtgatcaa
ctcacctgtccagcgtgtaaacaactgtacctccacccatttatgcttccctgtaaacat
tgtgtttgtggggattgcataggtaaaagaagggccaaggctgaagtgtctgagaacttt
ttcattctcatatgcccagtgtgtaacaaagcacattgccttccctattctaataaaatt
cagctgaagaagaatttactgagagccaaactggctaagagatatatgcagaaacatggc
cttatcaggtggagatttgacagaactcagacatcaatttattgtcaagcttgcaaagag
aagaaaagaaaggcatccaaaagatgtctgacatgtcaaatgaatttttgtaaagaatgt
ctaagtttatatcatagagatgattctgctcaagagcacatttttaccaaagcctatcaa
gaagatcaagaacagtcaaattgcttagtacattccagttcacctatctctgaatactgt
gtagatgaccatgagctaatctgtgactactgcaagaactcactgcacagtgaccatgag
acattgcccttgatagtggcatgctcaagggaggctggtgccctcttcaatgctattgca
aaatttaaaaaagtccggtatggggttgataatgacttattggaaacctttgtgttaaaa
aacaactttaaatcctacaaggacactaaaaggaaagagatcaggaatggattcttaaga
ttacgaagcatactccatgagagagagaaagagatgatggaattgcttgagaaccttgaa
tttaaaaaacagagaggaattacagaatatatggagcatgcttccaaaaaacttgcttac
atggacagccttcttcagtattctaaggaagctttgaaggaagagaatcaaattgcattt
cttcaatcttcaaattctttggtaaatgaaatagaagatgcaatcactaacatttaccag
cctaacccatgccttagagaagatcctattcagaatcttaaactgaactttgaagagctt
tcaaccaacttgaatggaattttcccaacctccgttaggataaagcaatcagatgataaa
gtaaacaaatatccctacccctgtaattctggcataattgttccaaagcgtgtttccagt
actcatttatcgaagccaaaaatagcacttcaaagtccatctttaacatcgctgtatgac
ccaaatgtactgaaaaaagaaatgtatggaagaccaaaatccacacctcctcttcatcct
aaacagagtaataaaatgtttgcatgttgggatacatctgaaatttcacgtaaagaaaca
tctcccagcattattcatagtccagaaatgtttgaagatggatcattgacagctccaggt
ctagtcattatctaccaaacgcttgcctacccaaaatctgccaaaatttactggacatgc
cctacagaagatgtggacttctttgatgtagagttctatgaagtcattgctgttactact
gataatgttatccagacacaactagctggacagctaagtgggataaagcatcaaaacctt
gagatacataatctagatccaagtacagaatatctctttaaagttcgtgctgtaaattca
aatggtacaggtcaatggagtgaaatctgcaaggtcatgacaccagatgaccgtggaaaa
gtccaaggtagatggggcttactgaggagtattcagtcttctctgcacaaagaactctga

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