Alligator sinensis (Chinese alligator): 102381972
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Entry
102381972 CDS
T02922
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X3
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04517
IgSF CAM signaling
asn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102381972 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102381972 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asn04812
]
102381972 (SPTBN1)
Cytoskeleton proteins [BR:
asn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102381972 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102381972 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102381972
NCBI-ProteinID:
XP_006021646
UniProt:
A0A1U7RD99
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAVQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFSYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIIRLLSKHKAFEDEMSGRSGHFQQTIKEGEDMIAEEHFGSEKIKERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILRIVSSNDVGHDEYSTQ
SLVRKHKDVAEEIANYRSVIDSLHEQAKALPQEHAESADVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNSMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLIAEKPETEAIVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLECQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSTDEVDGKRLIVEQKFLELLEPLTERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSPNAE
AIQQRLGDLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSRTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKVTDDADSQQQWDGTKGEQISQNGLPSDQESPRMAETVETNEMVNGAAEQRTSS
KESSPVPSPTTDRKAKTAFQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLSD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcaacagactatgacaatattgaaatacaacagcagtacagtgat
gttaacaaccggtgggatgtcgatgactgggacaacgagaatagctctgcgcgactcttt
gagagatctcgtattaaggccttagcagatgaacgtgaggcagttcagaagaagactttc
acaaagtgggttaattcacacttggcacgtgtatcatgcagaattacagatttatacgcc
gaccttcgcgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaaaccaacaaagggaaggatgcgcatccattgtttggaaaatgttgataaggccctt
cagtttctgaaagaacaaagagtgcatctagaaaatatgggatcccatgatattgtggat
gggaatcacaggctgactcttggccttatttggaccattattctgagattccagatccag
gatatcagtgttgaaactgaagataacaaagagaagaagtctgctaaagatgctttgcta
ttgtggtgccagatgaagacagctggttatcccaatgtcaacattcacaacttcactact
agctggcgggacgggatggctttcaacgcactaatacataaacacaggcctgatctcatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagagcaacaccttggtcttactaagcttttggacccagaggatatcagtgttgaccat
cctgacgaaaagtcaattatcacctatgtggtgacatattaccactacttttctaagatg
aaagctttagccgttgaaggaaaacgtattggaaaggtgcttgacaatgccatcgaaaca
gagaaaatgattgaaaaatacgaatcactggcttctgaccttcttgagtggattgaacaa
accatcatcatcctgaataatcgcaaatttgctaactcactggttggtgtgcaacagcag
ctgcaggcattcaacacctatcgcacagtggagaaaccacccaaatttacagaaaaagga
aacctagaagtgctgcttttcaccatccaaagcaaaatgagagcgaacaatcagaaagtg
tacatgcccagggaaggcaaactcatctcggacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcataagacaagagaaactg
gaacaacttgcacgtagatttgatcgcaaggcagctatgagagaaacctggctgagtgaa
aatcaacgtttagtttctcaggataactttggttttgaccttccagcagtggaggctgca
actaaaaagcacgaggccattgaaacagacattgcagcatatgaagaacgagtccaagca
gtggttgctgttgcaagggagcttgagactgaaaattaccatgatatcaaacgtatcact
gcaagaaaggacaacgttatccgtttgtgggagtacctgctggagctgctcagggcacgt
agacaaagactggagatgaaccttggtctgcaaaagatattccaggaaatgctttacatt
atggattggatggatgaaatgaaggtgctgctgctgtctcaggactatggcaagcatttg
ttaggggtagaagacctgttacagaaacatgccctagtggaggcagacattgccgttcag
gctgagagagtgagaggggtcaatgcatctgctcagaaatttgccacagatggggaaggt
tacaaaccgtgtgacccacaagttatcagagaccgagtagctcatatggagtttagttac
caagaactatgccagttagcagctgaacgccgggctcgcttggaagaatccagacgtttg
tggaaatttttctgggaaatggctgaagaggagggctggatcagagaaaaggaacaaatc
ttgtcatctgatgactatgggaaggatctaactagtatcatccgcctcttaagtaagcat
aaagcatttgaagatgaaatgagtggtcgtagtggccacttccaacagactataaaagaa
ggtgaagatatgattgctgaggaacactttgggtcagagaaaatcaaggaacgaatcaag
gacattcgggagcagtgggctaaccttgagcagctctctgccattaggaaaaagcgcctg
gaagaagcctctttgcttcaccagttccaagctgatgccgatgatatcgatgcctggatg
ttggacatccttaggattgtctccagcaatgatgttggtcatgatgaatattccactcag
tctttggtcaggaaacacaaagatgttgccgaagagattgcaaactatagatctgtcatt
gactctcttcatgagcaggcgaaggctctgccacaagaacatgctgaatctgcagatgtg
cagggcaggttgtctggaatagaggaaagatacaaagaggtggctgaactgacccggctc
cgtaagcaagcattacaagatacccttgctctgtataagatgttcagtgaagcagatgca
tgtgaactttggattgatgaaaaggagcagtggctgaacagtatgcagattccagagaag
ctagaagacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtggtaaatcagattgctagacagctgatgcacagtggtcat
ccaagtgagaaggagatcaaggcacagcaagataaactgaacacaaggtggagccagttc
cgagaactggtagacagaaagaaggatgctcttatctctgctctaagtatccagaactac
catctggaatgtaatgaaaccaaatcctggattagggaaaaaaccaaagtaattgaatcc
acacaagacctgggcaacgatctggctggagtaatggcccttcagaggaagttgacgggt
atggaacgtgatttggtagctattgaggctaagctaagcgacctgcaaaaagaggcagaa
aagctggaatctgagcatcctgaccaggcccaggccatcctgtcgaggcttgcggagatc
agtgatgtgtgggaagaaatgaaaaccaccctaaagaaccgtgaagagtcccttggagag
gcaagcaaactgcagcagttcttgcgtgacttggatgacttccagtcctggctgtccaga
acccagactgcgattgcctcagaagatatgccaaacacattggccgaggctgaaaagctc
ctcactcagcatgagaatattaagaatgagattaacaattatgaagaagactaccagaaa
atgagggacatgggtgagatggtaacacaagggcagactgacgcacagtatatgttctta
cgccaacgtctgcaggctttggacacaggatggaatgagcttcacaaaatgtgggagaat
aggcaaagtctcctctcacaatcccatgcctaccaactctttctcagagataccaagcaa
gcagaagcatttctcaataaccaggaatatgttttggcacatactgaaatgcccaccacc
ttggaaggagcagaagctgctattaaaaagcaggaggattttatgaccacgatggatgcc
aatgaggaaaagatcaacgcggttgtagaaactggcaggagactagttagcgatgggaac
attaactctgacaagatccaagagaaggtggactctatcgatgacagacataggaagaat
cgtgaagcagccagtgagcttctgatgagattgaaagacaacagggatcttcaaaagttt
cttcaggattgccaggagctgtcactttggatcaatgagaagatgcttacagcccaggat
atgtcttatgatgaagcaaggaacctacacagcaagtggctaaaacaccaggcattcatg
gcagaacttggatccaataaggaatggctggacaaaattgaaaaggaagggatgcaactc
attgcagagaagccagagactgaggccatagtgaaagaaaagctgacaggtctacaccaa
atgtgggaggagcttgaatctaccactcagaccaaggctcagcgactctttgatgcgaat
aaagctgagctgttcacccagagttgtgctgatctggataaatggctgaatggcttggag
tgccagatacaatctgatgactatggaaaggatcttaccagcgtcaacattctgttgaaa
aaacaacagatgcttgagaaccaaatggatgttcgtaagaaggagatagaagagctacaa
agccaggcacaggctttgagccaggaggggaagagtactgatgaggtggatggtaaacgt
cttattgtagagcagaaatttttggaattactggaacctttaactgaaaggaaggcaaat
ctattggcctccaaagagatccaccagttcaacagggacgtagaagatgagattttgtgg
gttggcgagaggatgcctatagcaacatctactgatcatggacataacctccagactgtt
cagctactaataaagaaaaatcagacacttcagaaagaaatccaagggcatcagcctcgc
atcgatgacatttttgagaggagccagaatatccttacagacagcagccctaatgccgaa
gcgattcagcagcgacttggtgacttgcagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaagcgcctggaggagtctcacagagcacagcagtattacttcgatgct
gctgaggctgaggcctggatgagcgagcaggagctgtatatgatgtcagaagagaaagct
aaggatgaacagagtgcagtatccatgttgaagaagcaccagattttggaacaggccgta
gaagactatgctgagacagtgcatcagctttccaggaccagcagaactttggttgcagac
aatcatccagaaagcgagcgcatcagtatgcggcagtccaaggtagataagctgtatgca
ggcctgaaggatctagctgaagagaggaggggcaaactggacgagagacacaggctcttt
cagcttaaccgggaagtggatgacttggagcagtggattgctgagagggaggtggtggcc
ggatcccatgagctgggacaggattatgaacatgtaacgatgctacaagagcgattccgt
gaatttgctcgagacactggaaacattggacaggagcgggttgatactgttaaccatatg
gctgacgagctcatcaattcaggacattctgatgctgccaccattgcagaatggaaagat
ggtctcaatgaggcatgggctgacctgttggagcttattgacacaagaacacagattcta
gctgcctcttatgaactgcataaattttaccatgatgccaaggagatcttaggacgtatc
caagataaacataagaagttacctgaagaacttggtagagaccaaaatacagtggaaaca
ctacagagaatgcacacaacgtttgaacatgatatccaagctttgggcacccaggtgaga
caactgcaggaggatgctgcacgtcttcaggctgcctatgctggggacaaggctgatgac
atccagaagagggagaatgaagtcctagaagcctggaaagctctgctagatgcctgcgag
ggacgcagggttagactggtagatacaggggacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttattcggcagattgaagcccaggagaagccaagg
gatgtctcatctgttgaattactaatgaacaatcaccagggtattaaagcagaaattgat
gcccgcaatgacagttttactacctgcattgaacttggcaaatctctcctggcaagaaaa
cactatgcatcagaagagatcaaggaaaagctactgcagttgacagagaagaggaaagaa
atgattgacaaatgggaagacagatgggaatggctgagactcattttggaggtacatcag
ttttcaagggatgctagcgtggcagaggcctggctgctggggcaggagccatacctatcc
agccgtgagataggtcaaagtgtggatgaagtggaaaagttaattaagcggcatgaagca
tttgagaaatctgcagctacttgggatgaaaggtttgcagcactggaacgactgactacg
ttggagttactggaagtacgtcgacagcaagaggaagaggagagaaagaggcaacctcct
tctccagagccaagtccaaaggtcacagatgacgcagattcacaacagcaatgggatggc
acaaaaggagaacaaatttcccagaacggtttgccgtcagaccaggagtctccacggatg
gcagaaacagtagagacaaatgaaatggtcaatggagctgcagagcagagaacaagttca
aaagaatctagtcctgttccttccccaacaacagaccgcaaagccaagactgcctttcag
gctcagaccgctgctacccttccagccaaaacacaggagaccccatctgctcagatggag
ggcttcttgcaccgtaaacatgaatgggagacacacagcaagaaagcctcaagcagatcc
tggcataatgtgtactgtgttataaacaaccaagagatgggcttctacaaagattccaag
gctgctgcttctggcattccttaccacaatgaaatccctgtcagtttgaaagaagcagtc
tgtgaagtagcagttgattacaaaaagaagaaacacgtgttcaagctaagactaagtgat
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggattcaggcg
atcacatcagctatctcctctgacaaaattgaagtgtctccaagcacacaaagcactcca
gcttctagtcgtgcccaaaccctgccagccagcgttacaataaccagcgaatccagtcct
ggcaagcgggagaaggacaaagaaaaagacaaagagaagagattcagcctttttggtaaa
aagaagtga
DBGET
integrated database retrieval system
