Alligator sinensis (Chinese alligator): 102381999
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Entry
102381999 CDS
T02922
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102381999 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102381999 (POLR1B)
Enzymes [BR:
asn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102381999 (POLR1B)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102381999 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF4743
DUF1186
Motif
Other DBs
NCBI-GeneID:
102381999
NCBI-ProteinID:
XP_006030355
UniProt:
A0A1U7SH26
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MVPKASICKELKVYPAECRGRRSTYRGKLTADISWSVNGIPKGIIKQPLGYVPIMVKSKL
CNLYSLPPRALIEHHEEEEEMGGYFIINGIEKVIRLLIMPRRNFPIAMVRPKWKSRGPGY
TQYGISMHCVRDEHTAINMNLHYLENGTVMLNFIFQKELFFLPLGFALKALVGFSDFQIF
QELIKGREGNSFYESCISQMLRMVMEEGCITQKQVLSYLGKCFRVKLNLPEWYSNEQTAE
FLLSQCICIHLKTKVDKFYLLCLMTRKLFAFAKEECMEENPDSLMNQEVLTPGQLYLMFL
KERMEAWLLSIKLALNKRAQKTNVTINSENLMKLFSMGIDVTRPFEYLLATGNLRSKTGL
GLLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTTTVRKLLPESWGFLCPVHTPDG
EPCGLMNHMTAVCEIVTQSASTLSLPPLLCSLGVTPVDGTPSQTYAECYPVVVDGSLVGW
VEKDLAPELADTLRRFKVLQEKKIPAWTEVVLVPMTGKPSLYPGLFIFTTPCRMVRPVRN
LALGKEELIGTLEQVFMNIAVLEDEIMPGVTTHQELFPHSMLSVVANFIPFSDHNQSPRN
MYQCQMGKQTMGFPLLTYRDRSDNKLYRLQTPQSPLVRPYMYDYYDMDSYPVGTNAVVAV
ISYTGYDMEDAMIVSKASWERGFAHGSVYKTESIDLTEKIKQGDDTLVFGIKANNPKVTQ
KLDADGLPYIGSILQYGDPYYSYLNLNTGESFIVYYKSKESCIVDNIKVCSNDSGSGKFK
TICVTVRIPRNPTIGDKFASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMT
IGMLIESMAGKSAALHGLCHDATPFTFSEKNSALEYFGRMLKAAGYNYYGTERMYSGISG
VELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDAL
LAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSATRNRKYCCTVCNQSD
TIDTVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccaaggccagcatctgcaaggagctgaaggtgtacccggccgagtgcaggggg
cgccgaagcacctaccgcggaaagctgactgctgacatcagctggtcagtgaatggaatt
ccaaaagggattattaagcagcctttgggatatgttccaattatggtgaagtctaaactt
tgcaatttgtatagtcttcctcccagagccttgattgaacatcatgaggaagaagaggag
atgggaggctattttataataaatggtatagaaaaagttattagattgttgattatgcct
aggcgaaactttcctattgcaatggtaaggcccaaatggaagagcagaggccctggttat
acacagtatggtatatctatgcattgtgtcagagacgagcacactgcaataaatatgaac
cttcactatctagaaaatggtacggtcatgctgaacttcatttttcagaaagagctgttc
ttcttacctttgggatttgctctgaaggcattagttggtttctcagatttccagattttt
caggagctgattaaaggtcgagaaggcaattccttctatgagagctgcatttctcagatg
ctgagaatggtgatggaagaaggctgtatcactcagaaacaggtcctcagctatctgggg
aaatgcttcagagtaaaacttaaccttcctgagtggtattcaaatgaacaaacagccgaa
tttcttttgagtcagtgcatctgcatacacttaaaaaccaaagttgacaagttctactta
ctttgtcttatgacccgcaagctgtttgcttttgctaaagaggaatgcatggaggagaat
ccagacagcctcatgaatcaggaggtgctcacacctggacagctttacctcatgttcctg
aaggagaggatggaagcatggttgctttctattaaattagccttaaacaagagagctcag
aagaccaatgtaactataaattcagaaaatttgatgaagctattcagtatgggaatagat
gtaacaaggccatttgagtatctccttgctactggtaacctacgatctaaaacaggtcta
ggcctgcttcaagattcaggtctgtgcgttgtagcagacaaactgaattttattcgctac
ctctcccacttccgctgcgtacacagaggtgctgcatttgccaagatgagaactaccaca
gtgcgcaaactgctgccagagtcctggggattcctgtgccctgtgcacacacctgatgga
gagccctgcggcctgatgaaccatatgacagctgtctgtgaaatagtgacacagtcagcc
tctacactgtccctgccacctttgctgtgctcattgggtgttaccccagttgatgggact
ccaagccaaacttatgcagagtgttacccagttgtagtggatggttccttggtgggctgg
gtagagaaagatttggctcctgaacttgcagatacccttcggcgctttaaggtgttgcaa
gaaaagaaaattccagcatggacagaagtggttcttgttccaatgacaggaaaaccaagt
ctatatccaggattattcatctttactaccccttgcaggatggtacggcctgtgagaaac
ttggccttgggaaaggaagaattgattggtactctggaacaggtcttcatgaacattgct
gtcctggaggatgagattatgcctggagtgactacccatcaagagctctttcctcacagc
atgctgagtgtagttgccaacttcattcctttctcggatcataaccagagtccaagaaac
atgtatcaatgtcagatggggaagcaaactatgggatttccacttcttacttatcgggac
cgctcagataataagctgtaccgacttcagacccctcaaagccctttggtacggccatac
atgtatgattactatgacatggacagctatccagttggtaccaatgcagtcgttgctgtc
atttcctacacaggctatgacatggaagatgcaatgattgtgagtaaggcgtcatgggag
agaggatttgcacatggaagtgtttacaagacagagagcatagacctcactgaaaaaatc
aaacaaggagatgacactctggtgttcggaatcaaggccaataatccaaaggttacgcag
aagttggatgcagatgggctgccatacattggatccattctgcagtacggggatccttac
tacagctaccttaacctcaacacaggggagagtttcatcgtttattataagagtaaggaa
agctgcattgtggataacatcaaagtgtgcagcaatgacagtggaagcggaaaatttaaa
actatttgcgtcactgtgagaatccctcgtaatccgactatcggagacaaatttgccagc
cgacatgggcagaaaggtattttgagcagactctggcctgttgaggatatgccatttaca
gagagtggaatggttcctgatattctcttcaatcctcatggctttccatcccgaatgacc
attggaatgttaattgagagcatggctgggaagtctgcagcgctgcatggcctttgtcat
gatgccacacccttcacgttttcagagaaaaactctgccttggaatattttggcaggatg
ttaaaggctgctggctacaactactatggcacagagaggatgtatagtgggatcagcggg
gtggagctagaggcagacattttcattggagttgtgtactatcaacgcctgcgccacatg
gtttctgacaagttccaagtgaggacaactggagccagagataaggtcaccaaccagccc
ataggtggaagaaacgttcagggtgggattcgttttggagagatggaacgtgatgctctg
ttggctcatggcacatccttcttgttgcatgaccgtctgttcaactgctctgatcgttca
gtagcccacgtctgtgtgaagtgtgggagcttgctttcacctttgttggagaagcctccc
ccatcctggtctgccacacgaaataggaaatactgctgtactgtttgcaaccagagtgac
acaattgacacagtatcagtgccttatgtcttccgatattttgtggccgagttggcagcc
atgaatataaaagtgaaacttgatgtgaaataa
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