Alligator sinensis (Chinese alligator): 102382570 Help Entry 102382570         CDS       T02922                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism asn  Alligator sinensis (Chinese alligator) Pathway asn03040   Spliceosome asn04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:asn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102382570 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102382570 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:asn03041]     102382570 (PRPF19)    04121 Ubiquitin system [BR:asn04121]     102382570 (PRPF19)    03400 DNA repair and recombination proteins [BR:asn03400]     102382570 (PRPF19) Enzymes [BR:asn01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102382570 (PRPF19) Spliceosome [BR:asn03041]  Complex B   Other components    Prp19 complex     102382570 (PRPF19)  Complex C    Prp19-CDC5 complex     102382570 (PRPF19) Ubiquitin system [BR:asn04121]  Ubiquitin ligases (E3)   U-box type E3    102382570 (PRPF19) DNA repair and recombination proteins [BR:asn03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     102382570 (PRPF19) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd U-box Beta-prop_SPT8 PROPPIN Beta-prop_Nup120_160 Cytochrom_D1 RMC1_N Beta-prop_DCAF12 zf-Nse Beta-prop_WDR35_TULP_N DUF1830 GP3 ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  102382570 NCBI-ProteinID:  XP_006026090 UniProt:  A0A1U7RYC3 LinkDB All DBs Position Unknown AA seq 503 aa AA seqDB search MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNXXXXXXXXXXXVAHPI RPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLT KEVTAAREALATLKPQAGLIVPQTVPSAQPNAAGAGEPMDLGELVGMTPEIIQKLQDKAT VLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGG ADKNVIVFDKSSEQILATLKGHTKKVTGVVFHPSQELVFSASPDATIRIWSVPNASCVQV VRAHESSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPD GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGV AFGHHAKFIASTGMDRSLKFYSL NT seq 1512 nt NT seq  +upstreamnt  +downstreamnt atggccctgatctgctcgatttcgaatgaggtgcctgagcacccctgcgtgtctccagtg tcaaatcatgtctatgagcgccggctgattgaaaagtatatcgctgagaatggcactgac cctgtgaacaaccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgcccaccccata cgacccaagccaccctctgctaccagcatcccggccattttgaaggccctccaagatgag tgggatgctgttatgctgcatagcttcacgcttcgccagcagctgcaaaccacccgccag gagctgtcacatgcgctgtaccagcatgatgccgcctgtcgtgtcattgcccgtctcacc aaagaggtcaccgctgccagagaagccttggccactctgaaaccccaggctggcctcatc gttccccaaactgtgccatctgcacagcctaacgctgcgggtgctggcgagccaatggac ctgggagagctagtgggcatgacccccgagataatccagaagcttcaagacaaagccacg gtactgactacggagcgtaagaagagaggcaaaacggttccagaggagttggtgaagcca gaggagctcagcaaataccgccaggtggcctcgcatgtggggctgcatagtgccagcatc ccagggatcctcgctctggacctctgtccatctgacaccaacaagatcctcactggtgga gcagataaaaatgtcattgtcttcgacaagagctcagagcagatcctggcgactctcaag ggacataccaagaaggtcactggcgtagtgtttcacccctctcaggagttagtgttctct gcttctcccgacgccactatccgcatctggtctgtcccaaatgcttcgtgtgtacaggtt gtccgtgcccatgagagctctgtgacggggctgagtctccacgctacgggtgactacctt ctcagctcctctgatgaccagtactgggctttctcagatatccagacaggccgcgttctc accaaggtcacggacgagagttctggctgtgctcttacttgtgcccagtttcatcctgat ggactcatttttggaacaggaacaatggactctcagatcaagatctgggacttgaaggaa cgcaccaatgtggccaacttcccgggccactccggccccatcaccagcatcgcgttctct gagaatggttactacctggccacggccgctgatgattcttctgtgaagctctgggatctg cgtaaactcaagaacttcaagacgctgcagctggacaataactttgaggtgaagtccctc atatttgaccagagtggcacatacttggccctgggtggcaccgatgtccagatctacatc tgcaagcagtggacggagatcctccatttcacagagcacagtggcctgaccacaggtgta gcctttggccaccatgcgaaattcatcgcttcaacaggcatggacaggagccttaagttc tacagtctgtag

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