Alligator sinensis (Chinese alligator): 102382917
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Entry
102382917 CDS
T02922
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C2
KO
K16493
protocadherin alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102382917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102382917
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102382917
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102382917
Cell adhesion molecules [BR:
asn04515
]
Cadherins
Protocadherins
102382917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_C_2
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
102382917
NCBI-ProteinID:
XP_025047371
UniProt:
A0A3Q0FIF1
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
ARLTSGSGRQYLELELGRGALLVKERMDREALCELSLTCFLSLELVIEQPIEVHNVEVEV
VDINDNAPSFPRQDYRLEISESAVPGTRFHIESAHDPDVGTNTVQTYRLSPSQHFALDLK
GFQRGSKLLELVLQQPLDREQSALQQLVLTAVDGGSPARSGTAQISIRVLDTNDNSPVFD
RSTYTVSLLENAALGTLVVRLNASDPDEGSNGEVLYSFSSYTPQKVRQLFSVDPHSGEVR
VNGTLDYEEASSYEIYVQATDRGPVSMVGHCKVLVNIVDANDNTPEVVLTSLYSPVPEDA
RAETVVALMSVMDQDSGLNKQVSLSIPLDMPFKLNSFKNSYTLVTQGKLDRETASSYNIT
VTATDSGSPPLSSRKVIQVDISDINDNPPQFEGPAYSVYIPENNPLGVSLCTVKATDPDA
NENAYVSYSLLNGDIQGLPVTSYVSIKADNGNIYAVNSFDYEKLREFQIVVRAQDAGSPP
LSSTVTVHVYVVDQNDHAPQILYPTSTNTTAAMEMIPRSASAGYLVTKVIAIDADSGQNA
WLFYYLAQASEPGLFRVELHSGEIRTTRKLGDESVNTFNLTVVVRDNGEPSLSSSVAITI
AVVDRVSKIIPDTRRYIKSTRNYSEITVYLIIALSSVSFIFLLTIIVLTVIKCYRYNVYG
DSCCGGFCGVRERCPAXXXXXXXXXXNIDTRIPHGLKVQPHFIEVRGNGSLTKTYCYKAC
LTAGSGSDTFMFYNTCGPTGTGPPAVMAERHLTGQSGQSAQNLILLKNESITPNEPKQPN
PDWRYSASLRADLFSAVHMEEAGVLRGGPGGPEQQWPTVSSATPEPEAGEVSPPVGAGVN
SNSWTFKFGPGNPKQGGPGELPDKFIIPGSPAIISIRQEPQNNQIDKSDFITFGKKEETK
KKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gcccgcctgacctcgggcagcgggcggcagtacctggagctggagctgggccgcggggcg
ctgctggtgaaggagcgcatggaccgggaggcgctgtgcgagctcagcctcacctgcttc
ctgagcctagagctggtgatcgagcagccgatcgaggtgcacaacgtcgaggtggaggtg
gtggatatcaatgacaacgcgcccagcttcccccggcaggactaccggctggagatcagc
gagtccgccgtgcccggcacccgcttccacatcgagagcgcccacgaccccgacgtgggc
accaacacggtacagacctaccggctcagccccagccagcacttcgccctggacctcaag
ggcttccagcgcggcagcaaactcctcgagctggtgctgcagcagcccctggaccgcgag
cagagcgctttgcagcagctagtgctcaccgccgtggatgggggcagccccgccaggtcg
ggcacggcccagatctccatacgggtcctggacaccaacgacaactcgcccgtcttcgac
cgatccacctacactgtgagcttgctggagaacgccgccctgggcacgctcgtggtgcgg
ctgaacgcctcggacccggacgagggctccaacggcgaggtgctgtactccttcagcagc
tacaccccgcagaaggtgcggcagctcttcagcgtggacccccactccggggaggtgcgg
gtaaacggcacgctggactatgaggaagcctcttcctatgagatctacgtgcaagccacc
gacaggggccctgtctccatggtcgggcactgcaaagtgctggtcaacatcgtggatgcc
aatgacaacacccccgaggtggtgctgacctccctgtacagcccggtgccggaggatgcc
cgggccgagaccgtggtggctttgatgagcgtcatggaccaggactccgggctgaacaag
caggtcagtctgagcatccctctcgacatgcccttcaaactcaactccttcaagaactcc
tacaccctggtcacacaggggaagctggaccgcgaaacggcttcctcctacaatatcacg
gttacggctaccgactccgggagccctcccctctcctctcgcaaggtgatccaggtggac
atctccgatatcaatgacaacccgccacagttcgaggggccggcgtattcagtttacatc
cccgagaacaacccccttggggtttccctgtgcactgtcaaagccaccgacccggatgcc
aatgaaaatgcctatgtgtcatattctctactgaacggagacatccaagggctacctgtc
acatcttacgtctccatcaaagctgacaacggtaacatctatgctgtcaactcctttgac
tatgagaagttaagagagtttcagattgttgtccgggctcaggatgctggaagcccccca
ctgagcagcactgtcactgtccacgtgtacgtggtggatcagaatgaccacgcccctcag
attctgtaccctacctcaaccaacaccacagcagccatggagatgatccctcgttctgca
agtgcaggatacttggttactaaagtaattgccattgatgcagactctggacaaaatgca
tggttgttttactatctggctcaagcctcagaaccgggtcttttcagagtggaactacac
agtggagaaattaggactactcgcaaactgggggatgagagcgttaatactttcaatctg
acagtggttgtgagagacaatggggagccatctctgtcttcatcagtagccataaccatc
gctgttgtggacagagtttccaaaatcatcccggacacaaggcggtatatcaaaagtact
agaaattactcagagataactgtctatctcataattgctttgagctcagtttcgttcatt
tttcttttgacaatcattgtcctaactgttatcaagtgctacagatacaatgtttatggt
gactcctgttgtggaggtttttgtggggtcagagaacgatgtcctgcnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnncaatattgacacgaggataccacatggtttaaaagtacagcca
cattttattgaagtgagagggaatgggtctctcactaaaacctactgctataaggcatgc
ctaactgcaggatcaggaagcgatactttcatgttttacaatacttgtggcccaacagga
actggtccccctgcagtgatggccgaaagacatctgacaggacagagtgggcagagtgca
caaaatctgattttacttaaaaatgagtccattactcctaacgagccaaaacagcccaat
cctgattggcgctattctgcatccctaagagcagatttattcagtgctgtgcatatggag
gaggcaggagtcttacgaggaggaccaggaggacctgaacagcagtggccaacagtctcc
agtgcaacaccagaacctgaggcaggagaagtatcccccccagttggagctggtgtgaac
agtaacagctggacctttaaatttggaccgggcaatcccaaacaaggtggtcccggtgag
ttgccagacaaattcattatcccgggatctcctgcaatcatctccatccgacaggaacca
caaaacaaccaaattgacaaaagtgacttcataacttttggcaagaaggaagaaaccaag
aaaaaaaagaaaaagaagaagggaaacaagactcaggagaaaaaagaaaagggaaacagc
accactgacaacagtgaccagtga
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