Alligator sinensis (Chinese alligator): 102383142
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Entry
102383142 CDS
T02922
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X3
KO
K06753
roundabout, axon guidance receptor 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102383142 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102383142 (ROBO1)
Cell adhesion molecules [BR:
asn04515
]
Immunoglobulin superfamily
ROBO family
102383142 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
102383142
NCBI-ProteinID:
XP_006032892
UniProt:
A0A1U7SJC5
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search
MVAEFARFYLLGCVWLCAGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDRDERIT
IRGGKLMITYTRKNDAGKYICVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVEDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVVSEPPHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLTCVATGALMPTILWKKDGVLISTQDSRIKQLETGALQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRA
ANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPTPASHGESEWLIFEVRTPTKNSVVIPELKKGVNYEFKARPFFN
EFQGADSEVKFAKTLEEAPSAPPQSVSVSKNDGNGTAIVVTWKPPPEDTQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
SGNGNSDTNLTTYSRPADCIANYNNQLDNKQTNLMLPEPTVYGDVDLSNKINEMKTFNSP
NLKDGRFVSQPGQPTPYATTQLIQSNITNNVNNGSGDTNEKHWKPSVQQKQEVAPMQYNI
MEQNKLNKDYRVNENIAPTIPYNQSYDQNTGGSYNSSDRGSNTSGSQGHKKGARTPKAPK
QAGMNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEDDDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDSQEDIGHAQHPPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEDDEADIEVAKMQNRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDAAGGRRHFHASHCPRPTSPVSTDSNLSAVVIQKVRPAKKQKHQPGHLRREV
YTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASIEPRTDRSGERKGASYKGREGA
DGRQHSDMRANSGERRESQEQQNDGKLRGNKAAKREGTPAKTHLLQEDILPYSRPTFPTS
NNPRDPSSSSSMSSRGSGGRQRADQTNIARRNIAEMQVLGAYEREEDEELEETES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggagtttgcccgcttctacctcctcggctgcgtctggctctgcgcaggctcc
cgtcttcgtcaagaggatttcccgcctcgaattgttgagcacccatctgatctcattgtt
tcaaaaggagaaccagcaactttgaactgtaaggccgaaggaaggccaaccccaaccatt
gaatggtataaagggggtgaaagagtggaaactgacaaagatgatcctcgctcccatcgg
atgttgctgcccagcggatctttatttttcttacgtatagtacatggtcgcaagagtaga
ccagatgaaggggtctatgtttgtgtagcaaggaattaccttggagaagctgtgagtcat
aatgcatctctggaagtagcaatactacgagatgacttcagacaaaacccttcagatgta
atggtagcagtgggtgagcctgctgtgatggaatgccagcccccaagaggccatccagaa
cccacgatttcctggaaaaaagatgggtcccctctggatgacagagatgaaagaatcaca
atcagaggaggaaagctcatgataacctatacaagaaagaatgatgctggcaaatacatc
tgtgttggaacaaatatggtgggagaaagagagagtgaagtggcagagcttactgttttg
gaaagaccatcttttgtgaagagacccagtaacttagcagtaactgtggaagacagtgca
gagtttaagtgcgaggcacgaggtgaccctgtacctacagtaagatggcgaaaagatgat
ggggaattaccaaaagcaagatatgaaatacgtgatgatcacaccttgaaaatccggaaa
gttatggcaggagacatggggtcttatacctgtgttgcagaaaatatggttggaaaagct
gaagcatcagcaacgctaacagttcaagttgtgtctgagcctcctcattttgttgtgaag
cctcgtgaccaggtggctgcattgggaagaacagtgactttccagtgtgaagcaactgga
aaccctcaaccagccatcttttggcggagagaaggaagtcagaatctgcttttctcatac
caaccgcctcagtcatccagccgcttttcagtctcccagacaggtgatctcactatcaca
aatgtccagaggtctgatgttggctactatatctgccagactttaaatgttgcaggaagt
atcaccacaaaagcctacctggaagttactgatgtcattgcagatcggcctcccccagtc
attcgccagggtcctgtgaatcagactgtagcagtggatggtactttagtactcacctgt
gtggccacaggtgccctaatgcccacaatactctggaaaaaagatggggtcctcatctct
acccaggactctcgcatcaaacaactggagacaggagcattacagatccgctatgccaag
ctgggtgacactggtcggtacacctgcattgcctccaccccaagtggtgaagctacatgg
agtgcttacattgaggtccaagaatttggagttccagtgcagccaccaagacccactgac
ccaaacttgattcctagtgcgccatcaaaacctgaggttactgatgtcagcaaaaataca
gtaacattgtcatggcaacctaatttgaattcaggtgcaactccaacctcttatataata
gaggccttcagtcatgcatctggaagcagctggcaaactgtagcagaaaatgtgaaaaca
gagagttttgcagttaaagggctgaaaccaaatgcaatttacctcttcctggtaagggca
gctaatgcatatggacttagtgatcctagccaaatatctgacccagtgaaaacacaagat
gttccacctacaagtcagggtgtggatcacaaacaggtccagagagaattgggggatgtg
gttcttcacctccacaatcccaccatcctttcttcttcttctattgaagttcattggaca
gtggaccagcagtcccagtatattcagggatataaaattctgtacaggccaacaccagct
tcccacggagaatctgaatggttaatttttgaagtgagaaccccgaccaaaaatagcgtt
gttattccagaactgaagaaaggtgtaaactatgaattcaaggcccgtcccttttttaat
gagtttcaaggagcagatagcgaagtgaaatttgccaaaaccctagaagaagctcctagt
gctccacctcaaagtgtttcggtatctaaaaatgatgggaatggcactgccattgtggtt
acctggaagccaccccctgaggatacccagaatggaatggtccaagaatataaggtttgg
tgtcttggcaatgaaagtagataccatataaacaagacagtggatggttccaccttttct
gtagtcattccctcattagttcctggtattcgatatagtgtggaagtggcagcaagcact
ggggcaggacctggagtgaaaagtgaaccacagtttatccagttagattcccatggaaac
cctgtgtcaccagaagaccaagtcagtttagcccagcaaatttcagatgttgtgaagcag
ccagccttcattgctggcattggtgcagcctgttggattattttgatggtcttcagcatc
tggttataccgtcaccggaaaaagcggaatggactcactagtacttatgctggtattaga
aaagtcccgtcttttaccttcacaccaacagtaacctatcagagaggaggagaagctgta
agcagtggaggcagaccaggacttctaaacatcagtgaacctgccactcagccgtggctt
gcggacacctggcctaacaccggaaataatcacaatgattgctccatcaactgctgcact
tcaggcaatggcaacagtgataccaaccttaccacgtacagtcgaccagctgattgtata
gcaaattacaacaaccaactggacaacaagcaaaccaacctgatgttgcctgagccaact
gtttatggtgatgtggacctaagcaacaaaatcaatgaaatgaaaaccttcaatagccca
aatctaaaggatggaagatttgtcagccaacctggacagcccactccttatgctactact
caactcatccagtcaaatatcaccaataatgttaacaatggcagtggggatacaaatgag
aaacactggaaaccctctgttcagcaaaagcaggaggttgcacccatgcagtacaacatt
atggagcaaaacaaattaaacaaagattaccgggtaaatgaaaatatcgctccaactatt
ccatacaatcaatcatatgaccagaacacagggggatcctataacagttcagatcgagga
agtaatacatctgggagtcaagggcacaaaaagggggctcgtactcctaaagcacccaaa
caagctggcatgaactgggcagacctgcttccacctcccccagcacatcctcctcctcac
agcaacagtgaagattacagtctttctgtggatgaaagctatgaccaagaaattccatgt
ccagtgccacctgcaaggatgtatctgcagcaggatgagctagaggaagatgatgatgag
cgaggccctaccccaccagttcgcggagcagcttcatctccagcagccgtctcatacagc
catcagtcaactgccacattaacaccttcaccccaggaagaacttcagcccatgttacag
gattctcaggaggacataggacatgcacagcacccacctgaccggagacgccagcctgtg
agccctccgccaccgccaaggcccatttctccaccacacacctatggttatatttcagga
ccccttgtctcagatatggatactgatgcaccagaagaggaagatgatgaggcagacata
gaggttgccaagatgcaaaatagaaggcttcttttgcgtggccttgagcaaacacctgct
tcaagtgttggggatttggaaagttctgtcacagggtccatgatcaatgggtggggctca
gcctcagaagaagacaacatctcaagtggacgttccagtgttagctcttctgatggatca
ttttttactgatgcagattttgcacaggccgtggcagcagctgcagaatatgctggtctt
aaagtagcaagacgtcaaatgcaggatgctgcaggaggccgtagacattttcatgcatcg
cactgccctagacccaccagccctgtgtctactgacagcaacttgagtgctgttgtaata
caaaaggtccgacctgccaaaaagcaaaagcatcagccaggacatctgcgcagagaagtc
tacacagatgacctgccacctcctccagtgccacctccagctataaaatctcctactgcc
cagtccaagtcccagctggaagttcggcctgtcatgttgccaaagctcgcttctatagaa
ccaagaacagacagatctggggaaagaaaaggagcaagctacaaggggagagaaggggca
gatggccgacagcactctgatatgcgggcaaattcaggagagcgcagagaatcgcaggaa
cagcaaaacgacgggaagctgcgagggaataaagcagcaaagcgagaaggcacaccagca
aaaactcatcttctccaagaggacatcttaccatactctagacctacgtttccaacttca
aataatcctagagatcccagttcctccagctccatgtcatcaagaggatcaggaggtaga
caaagggcagatcaaacaaatatagcgcgaaggaacattgcagaaatgcaagtactggga
gcatatgaacgagaagaagatgaagaattagaggaaactgaaagctga
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integrated database retrieval system