KEGG   Alligator sinensis (Chinese alligator): 102383174
Entry
102383174         CDS       T02922                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03030  DNA replication
asn03410  Base excision repair
asn03420  Nucleotide excision repair
asn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102383174 (RFC4)
   03410 Base excision repair
    102383174 (RFC4)
   03420 Nucleotide excision repair
    102383174 (RFC4)
   03430 Mismatch repair
    102383174 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asn03032]
    102383174 (RFC4)
   03036 Chromosome and associated proteins [BR:asn03036]
    102383174 (RFC4)
   03400 DNA repair and recombination proteins [BR:asn03400]
    102383174 (RFC4)
DNA replication proteins [BR:asn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102383174 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102383174 (RFC4)
Chromosome and associated proteins [BR:asn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102383174 (RFC4)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102383174 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102383174 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_assoc_2 AAA_22 AAA_11 AAA_30 AAA_16 AAA_24 DNAX_ATPase_lid AAA_14 SLFN-g3_helicase Mg_chelatase AAA_28 DNA_pol3_gamma3 AAA_19 AAA_5 AAA_23 TIP49_C DUF815 AAA_7 AAA_3 HrcA_DNA-bdg
Other DBs
NCBI-GeneID: 102383174
NCBI-ProteinID: XP_014383319
UniProt: A0A1U8E038
LinkDB
Position
Unknown
AA seq 303 aa
MKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIRE
KVKAFAQLTVSGNRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YISRIIEPLTSRCSKFRFKPLSDKIQEQRLLDISEKENVKISSEAISYLVQASEGDLRKA
ITFLQSATRLTGGKEITEKVVTEIAGVVPKEAIHGLLAACRSGSFEKLETVTKNLINEGY
AASQLVNQLHDVIVESEDLSDKQKSTIAEKLADVDKCLADGADEYLQLISLCAIMMQQLT
QNS
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaaaaaatccttggaaggagctgatcttcccaatcttttgttctatggccctcctgga
acgggaaagacttccactattttggcagcagccagagaactttatgggcctgaactgttt
cggcagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgattcgagaa
aaagtgaaggcttttgctcagctaactgtatctggaaaccgttcagatggaaaggtttgt
cctccattcaagattgtgatcctggatgaagcagattctatgacctcagcagcacaggca
gccttaagacgcactatggagaaggaatctaaaacaacacgtttctgtcttatttgtaac
tacatcagcaggataattgaacccttgacgtctcgatgctccaaattccgtttcaagcct
ctttcagataaaattcaggaacagagactactagatatttctgaaaaggaaaatgtgaaa
atcagcagtgaggcaatatcttaccttgttcaagcgtcagaaggagacttaagaaaagca
atcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcacagagaaggtt
gtcaccgaaattgctggggtggtccctaaagaagcaatccatggacttcttgctgcctgt
cgaagtggctcttttgaaaagctggaaacagtaacaaagaatctgataaatgaggggtat
gccgctagtcagcttgtcaaccagctccatgatgttattgttgagagcgaagatctcagt
gacaagcaaaaatccacaatagcagagaaacttgctgatgtggacaaatgcctggctgat
ggtgctgatgagtacttgcagctgattagcctctgtgccatcatgatgcagcagctgact
cagaacagctag

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