KEGG   Alligator sinensis (Chinese alligator): 102384315
Entry
102384315         CDS       T02922                                 
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102384315 (SMARCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asn03021]
    102384315 (SMARCC1)
   03036 Chromosome and associated proteins [BR:asn03036]
    102384315 (SMARCC1)
Transcription machinery [BR:asn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102384315 (SMARCC1)
Chromosome and associated proteins [BR:asn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102384315 (SMARCC1)
   PBAF complex
    102384315 (SMARCC1)
   GBAF(ncBAF) complex
    102384315 (SMARCC1)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Chromo HEAT_GCN1 DUF919 BRCT_2 SpeFL
Other DBs
NCBI-GeneID: 102384315
NCBI-ProteinID: XP_006035738
UniProt: A0A1U7SDH2
LinkDB
Position
Unknown
AA seq 1043 aa
WLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFLDFKAGGT
LCHVLGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFINIEKMLVQNNCLSRPIIYLIPDIE
LKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSLDDDEWLRPVMKKDKQVLVHWGFYP
DSYDTWVHASDIDAEIEDPPIPEKPWKVHTKWILDTDVFNEWMNEEDYEVDENRKPVSFR
QRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAGLYGKRRGQ
KEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVAA
GGKEDEDPNKGDQSRSIDAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGK
NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQ
VDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNKEKPTDLQN
FGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECI
LHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA
LEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLDGAEE
EKMETETDGQQSEKVESKGEGEMEEGEKVQEGENERNPEKEQDSEVTADVKSEEKEAEEN
KENVDASKDKESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVAL
LVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQM
EQQHSQNAQQSHQHSSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHPPQPGQMPG
PGAMIPGQPVPGRMMPSVSANIHPPGSGPAPPGMPPMSGNIIGPRVPLAAPNGMYPPPSQ
QPPPPAEGVTAPAAGAPPASAAP
NT seq 3132 nt   +upstreamnt  +downstreamnt
tggctcggcaagcactacaagaagtatgtccaagcagatgctcctaccaataaaacattg
gctgggctggtggtgcagctgctacagttccaggaagatgcctttggaaaacatgtcacc
aatcctgccttcaccaaacttcctgcaaagtgcttcctggatttcaaagctggaggcacg
ttatgtcacgttcttggtgctgcttacaagtataagaatgaacaaggatggcggaggttt
gatctgcagaacccatcccgaatggatcgtaatgtggagatgttcattaacattgagaag
atgctagtgcagaataattgtttgagcagaccaatcatctacctcattccagatatagag
ctgaagttggctaacaagctaaaggatattgtcaaacgtcaccagggaacagtaactgag
gagaagtcaaaggcaacccaccatgtttatcctagtcctacctcactggatgatgatgaa
tggttgagacctgtgatgaaaaaggataagcaagtgctggtacactggggcttttaccca
gacagctatgacacttgggtgcatgctagtgatatagatgctgaaattgaagatcctcca
attccagaaaaaccatggaaggttcataccaaatggattttagacacggacgtatttaac
gagtggatgaatgaagaggattatgaagtggatgagaataggaagccagtgagctttcgg
cagcgaatctctatgaagaatgaagagcctgtgcgtagtcctgagaggagagacagaaaa
gcagcagcaagcaccaggaaacgaaagcattcaccttcccctcctcccactccagtggaa
tcaaggaaaaagactggaaaaaaaggacaagcaggtctgtatgggaaaaggagaggtcaa
aaagaagaggatgagcaagaagatcttaccaaggacatggaagacccaacacctgtaccc
aacatagaagaagtggtacttcccaaaaatgtgaacccaaagaaagacagtgaaaacacc
ccggtgaaaggaggaacagtagcagacctagatgaacaagatgaagagacagtggctgca
ggaggaaaggaagatgaagatcctaataaaggtgatcagagccgatcgattgatgcaggt
gaagacaacgtaaccgagcagacaaatcacatcattattccaagctatgcatcctggttt
gactacaattgcattcatgtaatcgagcgccgtgctcttccagagttcttcaatgggaaa
aacaaatccaagactccagaaatatacctggcttaccggaacttcatgattgatacgtat
cgcttgaaccctcaggagtacttgaccagcaccgcttgccgacggaacctgaccggagac
gtgtgtgctgtaatgagggtccatgcctttctggagcagtggggtctcattaactaccaa
gtggatccggaaagccgtcccatggccatgggcccccctcctactcctcatttcaacgtg
cttgcggatactccctctggacttatgcctctccatatccgaactcctcaggtccctgct
gctcagcagatgttgagttttcctgaaaaaaacaaagaaaagcccactgacctgcagaat
tttggactccgcacagacatttattcaaagaagaccttagcaaagagcaaaggagccagt
gccggaagagaatggacagaacaagaaacactactgctactagaggctctggagatgtac
aaggatgactggaataaggtctctgagcatgttggcagccgtacccaggatgagtgtatt
ctccattttctgaggcttcccatcgaggacccgtacttggaaaactctgatgcgtctcta
ggcccactggcttaccaacctgtgcctttcagccagtccggaaacccagtgatgagcact
gttgcttttctggcatctgtagtggatccccgggtggcgtccgctgcagctaaagctgct
ttagaggaattttctcgggtgcgagaggaggtaccactggagcttgttgaagcccatgtc
aagaaagtacaggaagcagcaagagcctctggcaaagtggatccaacttatggactagag
agcagctgcattgctggaacaggtccagacgagccagagaaattggatggagctgaagaa
gaaaaaatggaaactgagacagatgggcaacagtcagaaaaggtggaaagtaaaggagaa
ggtgaaatggaggaaggtgaaaaagttcaggaaggagaaaatgagagaaatccagaaaag
gagcaagacagtgaagtgactgctgatgtcaagtcagaagagaaggaagcagaggagaac
aaggaaaacgttgatgcaagcaaagacaaggagagtgatactgggaagaagaaagtggaa
cacgagatctctgaaggaaatgtagcaacggctgcagctgcagctcttgcctcagctgcc
accaaagcaaagcacctggcagcagtggaagagagaaagatcaaatctttggtagccctc
ctggtggaaacacaaatgaagaaactggagatcaagcttcgtcattttgaggagctggaa
acgatcatggacagagagaaagaagctctagaacagcagaggcagcaactgctgacggag
cgccagaacttccatatggagcagctgaaatacgctgaattacgggctcgccagcaaatg
gagcagcagcacagtcagaacgcccagcagtcgcaccagcactccagcgggccgggcatg
aacccacttggggcacccgcgcatccgggcttgctgccccatcagcagccccctccgtac
cccatgatgcatcaccagatgccccctcctcacccaccgcagccaggtcagatgccagga
cccggtgcgatgatacctgggcagcccgtgccgggccggatgatgccaagcgtgtctgcc
aacatccacccgccaggcagtggccctgcacccccgggcatgccgcccatgtcgggaaac
atcatcggacctcgcgttcccctcgcagctccgaacggcatgtatccacctccatcgcag
cagccaccaccgccagctgaaggggtgaccgcccctgccgcgggagcaccgccggcctcc
gcagccccctaa

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