Alligator sinensis (Chinese alligator): 102384957
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Entry
102384957 CDS
T02922
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X2
KO
K08524
retinoid X receptor alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03320
PPAR signaling pathway
asn04148
Efferocytosis
asn04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102384957 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102384957 (RXRA)
03320 PPAR signaling pathway
102384957 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102384957 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asn03310
]
102384957 (RXRA)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102384957 (RXRA)
Nuclear receptors [BR:
asn03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102384957 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102384957
NCBI-ProteinID:
XP_006028680
UniProt:
A0A1U7SDP6
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMAAPSLHPSIGPGIGSPLGSAGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPNLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLLGRQEEQAVQEERQRGKDRN
ENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQL
FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNS
AHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKV
YASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQMT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgccactggatttctccaaccaagtcaattccacctccctg
aactccccgaccagccgggggcccatggctgcaccttccctccatccatccatcggaccg
gggatcggctctccgctgggctcagcgggccagctccactcccccattagcaccctcagc
tcccccatcaatggcatgggccctcctttctccgtcatcagctcccccatgggacctcac
tctatgtcagtcccctccacccccaacctggggtttggaaccggcagcccacagctcaat
tctccgatgaaccctgtcagcagctcagaagacattaaaccgcccttggggctcaatggg
gtccttaaagtgccagcacacccctcaggaaccatggcctccttcaccaagcacatatgt
gccatctgcggggaccgatcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggtttcttcaagcgcacggtgcggaaagacctcacctacacctgccgtgacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctatcagaagtgt
ctggccatgggcatgaagcgagaagggatggagcatcatccatcccggcccacaagactt
ctgggaaggcaggaagaacaagctgtgcaagaggagaggcagagggggaaagatcgaaat
gagaacgaggtggagtcgacaagcagcgccaacgaggacatgcccgtggagaagatcttg
gaagccgaactggcagtggagccaaagacagagacgtacatcgaagcaaacatgggcttg
acccccagctcgcccaacgacccggtaaccaacatatgccaagcagcggacaaacagctc
ttcaccttggtggaatgggcaaagagaatcccccacttctcggagctgccgctggatgac
caggtcattttgctcagagcaggctggaacgaactgctcatcgcctccttctcccaccgt
tcgatagctgtgaaagacgggatcctcctagctaccggcctccacgtccatcggaacagc
gcgcacagcgcaggggtcggtgccatctttgacagagtactgacagaactcgtgtcaaaa
atgcgggacatgcagatggacaagacagagctgggctgcctgcgggccatcgttctcttc
aacccagattcaaaaggtctctccaaccccgccgaggtggaggccttgcgtgagaaggta
tacgcgtcgctagaggcatactgcaaacacaaataccctgaccagcctggaaggtttgca
aagctcttgctccgtctccctgccctccgatccatcggcctgaaatgcctggagcacctg
ttcttcttcaagctaataggagatacacccatcgacaccttcttgatggaaatgctggaa
gcgccccaccaaatgacttaa
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