Alligator sinensis (Chinese alligator): 102384970
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Entry
102384970 CDS
T02922
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X2
KO
K16498
protocadherin delta 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102384970 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asn01009
]
102384970 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102384970 (PCDH9)
Protein phosphatases and associated proteins [BR:
asn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102384970 (PCDH9)
Cell adhesion molecules [BR:
asn04515
]
Cadherins
Protocadherins
102384970 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102384970
NCBI-ProteinID:
XP_006032410
UniProt:
A0A1U7S733
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVRVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYVFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRXXXXXXXXXXXLTASRVFDRE
EQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGV
ITVTDADAGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQP
PRSSTAKVTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAEL
KYTIVSGNNKGLFRIDPVTGNITLEEKPTPTDVGLHRLVVNISDLGYPKSLHTLVLVFLY
VNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVT
VLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPD
DAVHEPINGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPD
TPVSVKKHHVIQELPLDNTFVGGCDTLSKXXXXECSSQGGFKTKGPLHTRQI
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttgaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtgcccata
gggaacataccaaaggatctgaacatttctcatatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtgtctaaagctggggatgcccctttggttagagtgtccagc
accaccggagaaatcttcaccacctcgaatcgaatagacagagaaaaactctgtgctgga
gcctcctatgctgaggagaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttctttaggctgatcaaaataaaaatcatcgtaaaggataccaatgacaatgcaccc
atgtttccatctcctgtcatcaatatctccataccagaaaacactttgatcaacagccgc
tttccaattccatcagccacagatcctgatactgggttcaacggggtgcagcactatgag
ttgttaaatgggcagagcgtctttggactggatatcgtggaaactcctgaaggagagaaa
tggcctcaactcattgtgcagcagaacttggatagagagcagaaagacacctatgtgatg
aaaattaaagtagaagatggagggagccctcagaaatccagcacagccatactgcaagtc
acagtaagtgatgtcaatgataacaggcctgtttttaaagagagtcaggtggaggttcat
atccctgagaatgcccctgtgggtacctctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatgtttttggtgcccaagttgcccctgcaaccaaa
agactctttgctctaaacaacactacagggctaataacagttcagcggtccttagatcga
gaagagactgctattcacaaggtgaccgtgctggccagtgatggcagctctactccagct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcctatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtcatc
tgtttcattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctggcaagcccagtctgaaccagactgccctagtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcggnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnttttaacagcctccagagtttttgacagagaa
gagcaagaacgtttcatttttaccgttacggccagggacaatggcacccctcctctgcag
agtcaggcagctgtgattgttactgtactggatgaaaatgacaacagtcccaaatttact
cataatcactttcagttttttgtatctgagaatttaccaaagtatagtactgtgggggtg
atcacagtgaccgatgcagatgcaggggaaaataaagcagtgaccctttccatcctgaat
gacaacgagaactttgtgctggatccttactccggagttatcaaatccaatgtttctttt
gatcgagaacagcagagctcttacacctttgatgtcaaggccgttgatggaggacagcct
cctcgttcttctacagcaaaagtaactataaatgtcatggatgttaatgataacagcccg
gtcgtcatttacccaccttcaaatacttcatttaagctggtgccactctcagcaatccca
ggctcagtagtagcagaagtgtttgctgtggatatagacactggaatgaatgctgagctt
aaatatacaattgtgagtggaaataacaaaggtttatttcgtattgatccagtgacaggt
aacattactctggaagaaaaaccaactcctactgatgtggggctgcatcgtctagttgtc
aacataagtgatttgggttatcctaaatccttgcatactcttgtgcttgtatttttgtat
gtaaatgacactgctggaaatgcctcttacatttatgacctgatacgcaggactatggaa
acacccttggaccggaacataggggacagtagccaaccctatcaaaatgaggactatctt
accatcatgattgctattgtggcaggtgcgatggttgtcatagtggtgatatttgtcacg
gttctggttcgctgtcgacacgcgtctaggttcaaagcagcacaaaggagcaagcaaggt
gctgaatggatgtctcccaatcaggagaacaagcagaacaagaaaaagaaaaggaagaaa
aggaagtctcctaagagctctcttttgaactttgtaaccattgaggagtccaaacctgat
gatgcagttcatgaacctatcaacgggacaataagccttccagcagagctggaggagcag
agtataggaagatttgattggggcacagcaccaccaaccacctttaagcctaacagtcct
gaccttgcaaagcattacaaatctgcctccccacagtctgcgtttcatcttaaacctgac
actccagtttcagtgaaaaagcatcatgtgattcaggaacttcccttggacaacaccttt
gttggtggttgtgacaccctttccaaacnnnnnnnnnnagagtgcagttcccaaggaggc
ttcaagacaaagggccccttacacaccagacagatttaa
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