Alligator sinensis (Chinese alligator): 102385276
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Entry
102385276 CDS
T02922
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04140
Autophagy - animal
asn04142
Lysosome biogenesis
asn04145
Phagocytosis
asn04148
Efferocytosis
asn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102385276 (VPS18)
04142 Lysosome biogenesis
102385276 (VPS18)
04140 Autophagy - animal
102385276 (VPS18)
04148 Efferocytosis
102385276 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102385276 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102385276 (VPS18)
Membrane trafficking [BR:
asn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102385276 (VPS18)
Hops complex
102385276 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-RING_16
zf-RING_UBOX
zf-RING_Vps41
zf-RING_5
aq_1631
zf_RING_Vps8
zf-ANAPC11
DUF2229
DUF8221
Nup54_57_C
TMEM249
zf-C3HC4
STX17_N
zf-rbx1
KNOX2
Lact-deh-memb
Motif
Other DBs
NCBI-GeneID:
102385276
NCBI-ProteinID:
XP_025061096
UniProt:
A0A3Q0GMW1
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MKEGPGLPAARCPVLPPIAGVQSASGSVPAPRRVCSALGAAKLLRYVNARLEKETPIFNK
QRIDFTPPEKINSLVVSCNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLD
HTGSHLLIALNTSECLYLNRNAQKVRTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAQ
GQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEETGPAPVCCLEIERGIDGKYFIIATTHK
RLFQFVGKVAEGTEQQGFSSIFAMHTDHLPSFREFPASFGYSEIAFYTPKLRSSPRCFAW
MMGNGVLYGLLDYGRPDSILSEERVWVYPSDIDVTINKPISIVLTQFHFLLLLPDRVTAV
CTLNGQVVFQDVFLEKFGSLKHMIKDPTVGQIWIHTEKVVFRYHVQRESRDVWKMYMNMN
KFDLAKEYCKDRPECLDIVLAKEAEHCFQNKKYLDSAKCYALTQNYFEEIALKFIEAKQE
EALMEFLLKKLASLKHSEKTQTTLLTTWLTELYLNWLGVLEGDASKRHLYLETRERFRNF
LISPKNKECLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVIAHHCQHEEYDEALNVL
SRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGIKLDAKKLIPALVNYSQSGSTQQINEAI
RYMEFCVYELEETEQAIHNYLLSLYALCRPDSLLSYLEQTGTSPSRIRYDLKYALRLCAE
HEHHRACVHIYKVMEMYEEAVDLALQVDVDLAKSCADLPEEDEELRKKLWLKIACHVVQE
EKDVKKAMACLSSCNLLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEA
TQSARRIREDIQEMRNKYGSVEPQEKCAVCDFPLLNRPFYLFLCGHMFHYDCLLQAVYPN
LPAYKQVKLEDLQKKLAATSQPSKAHHRPKDTDATSLGKGQQSREQIKADIDDIVAAECV
FCGELIIRSIDKPFIDPQKYEEEKQSWL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagggccccgggctccccgcagccaggtgcccggtgctccctcccatcgccggg
gtgcagtcggccagtggatccgtgccggccccacgtcgggtttgcagcgcgctgggagct
gcgaagctcttacgatatgtgaatgcccggttggagaaggaaaccccgatatttaacaag
cagagaatagatttcactcctccagagaaaattaacagtctagtggtctcctgtaaccag
ctctgcatgagtcttggcaaagacacacttctaaggattgatcttggcaagccagatgaa
cctaatcaggtagagttgggacgcaaggatgaagccagagtctacaagatgtttttggac
cacacaggttctcacctcttgattgcattgaacaccagtgaatgcctctatttgaacaga
aatgctcagaaggtgcggacactctcccgctggaagggtcatttgatcgaaagcgtaggc
tggaacaagttcctgggtacagaaactaacactggccctatcctggtggggacagcacag
ggccaaatatatgaggctgagatatctgtcagtgagggaagcctcttcagcactaatcct
gaccagtatttccgccaggtttatacattggaggaggagactgggcctgctcctgtctgc
tgtttggagatagaacgtgggattgatgggaagtattttatcattgccaccactcacaag
aggctcttccagtttgttggcaaggtagctgaagggacggaacagcaaggcttcagctcc
atatttgccatgcacacagaccacttgccaagcttccgggagttcccagccagctttggc
tatagtgaaatagcattttacaccccaaagctacgctcctctccccgctgctttgcctgg
atgatgggaaatggtgtcttgtatggtttgttggactatgggcggcctgactctattctg
agtgaagaacgggtctgggtatatccctctgacatagatgtgacaattaataagccaatc
tccattgtgctcacccagttccacttcctgctgcttctgcctgacagagtgacagcagtg
tgcactctaaatgggcaggtcgtcttccaggatgtgttcttggaaaaatttggctctctg
aagcacatgatcaaagatccaacagttgggcagatctggatccacacagagaaagttgtg
tttcgctatcatgtacagcgagagtctagagatgtgtggaagatgtacatgaacatgaac
aaatttgatctggccaaagagtattgcaaagaccggcctgagtgtctggatattgtgctg
gcaaaagaggcagaacactgtttccagaacaagaagtacttggatagtgccaagtgttat
gcccttacacagaactactttgaggaaattgcccttaagttcattgaagccaaacaagaa
gaggcactgatggagttcctgctcaagaaactggcaagcttgaagcactctgagaagacc
cagacgactctgttgaccacttggctaacagagctctacctgaattggctgggtgtgctg
gagggtgatgcctcaaaaaggcacctctatttggagacccgtgagagatttcgtaacttc
ctaatcagccccaaaaacaaagaatgtctgtttaataaccgtgcatctatttacgagttg
ctggcaagtcatggagatacagaacacatggtctactttgctgttattatgcaggattat
gagcgagtgatagcccatcactgccagcatgaagagtatgatgaagccctaaatgtactg
tccagacatagagatgaaaagctgttttacaagttctctccagttctgatccagcacatc
cccaagaaagtagttgatgcttggatatccatgggtataaaactagatgcaaagaagctt
atacctgcccttgtcaattatagtcagagtgggagcacacaacagatcaatgaagctatt
cggtatatggagttctgtgtgtatgaattggaggaaactgaacaagccattcacaactac
ttattgtctctttatgctctgtgtcggccagactccctgctatcatatctagaacaaact
gggaccagtcccagtaggattcgctatgatctgaagtatgcgcttcggctctgtgcagag
catgaacaccaccgagcttgtgtccatatatacaaagtgatggaaatgtatgaggaggca
gtggatctggctttgcaggtggatgtggatctggccaagtcctgtgcagaccttcctgaa
gaggatgaggagctccggaaaaaactctggctgaaaattgcatgccatgtagtccaagaa
gagaaggatgtgaagaaagccatggcctgcctctccagctgcaacctgctgaaaatcgaa
gatgtcctgccattcttcccagactttgtcaccattgatcatttcaaggaggctatctgc
aactctctggaggactacaacaagcatattgaggagctgaagagagagatggaggaagcc
acacagagtgccagaaggatccgggaggatatccaggaaatgagaaacaaatatggctct
gtagagcctcaggagaagtgtgctgtctgtgactttcccctcctaaatcgcccattctac
cttttcctttgtggccacatgtttcactatgactgccttcttcaggcggtttatccaaac
ctacccgcttacaaacaagttaagttagaagaccttcaaaagaaactggcagctacaagc
cagccctccaaagctcaccatcgcccaaaggacacagatgccactagtttagggaagggg
cagcagagtcgggaacagatcaaggctgacattgatgatattgtggcagctgaatgtgtg
ttctgtggggagctgataatccggtctattgacaagccttttattgatccacaaaagtat
gaagaggagaagcaaagctggctgtag
DBGET
integrated database retrieval system
