Alligator sinensis (Chinese alligator): 102385340
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Entry
102385340 CDS
T02922
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102385340 (PRDM1)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102385340 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
102385340
NCBI-ProteinID:
XP_006019867
UniProt:
A0A1U7RT53
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MLINKAATQCSSDSVSFKLLVKGTDWTMKMDMEDADMTLWTEADFEEKCTYIVNDHPWDP
STDGGNVTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTTDTVPKN
ANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGHSVQEQNLAACQNGMNIYFYTIKP
IPANQELLVWYCRDFAERLHYPSSGELTMMNLTQGHNNPKQQSTDKDELYQKSIPKKEHS
VKEILKTESNPSKGKDLFQTNISPITPEKNLDDLRKNCSPERCFFPRVIYPIRPHMPEDY
LKASLAYGMERPNYITQSPIQSSTTPSPSARSSPDQSLKSSSPHSSPGVTVSPLAPTSQE
HRESYPYLNGPYGSEGLGSYPGYAPPSHLSPAFLSSYNSHYPKFLLPPYSMSCNNLSALN
NINGINNFNLFPRIYPLYGNILGGGSLSHHVLNPAALPGSLPSEGSRRLLQPDHPRDFLI
PAPNSAFSITGAAASMKDKPCSPTSGSPQAGTAATSEHIMQPKPTSAVLAATSSEEAMNL
IKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCN
KGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFT
QFVHLKLHKRLHTRERPHKCVHCHKSYIHLCSLKVHLKGNCPVAPASSLSMEDLNRINEE
IEKFDISDNADKLEDMEDNIDMTSVVEKEILTMLRREIEGANLKVSLQRNLGNGLISSGC
NLYESSDMSIMKLPHGHPLPLLPIKVKQETIEPMDP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaataaggctgccacacagtgtagctcggactctgtgagtttcaaactgctt
gtaaaagggacagactggacaatgaaaatggacatggaagatgctgacatgactttgtgg
acagaggctgattttgaagagaagtgcacgtacatcgtaaatgatcacccatgggatcct
agcactgatggaggcaacgtaactcaggcagaggcttccttgccaaggaacttgactttc
aaatatgcatcaaactgtaaagaggttactggagttataagcaaagagtacatcccaaaa
ggaacacgctttggacccctggtaggagagatctataccaccgatacagttcccaagaat
gcaaacagaaaatacttttggcggatctattccagtggtgagcttcaccacttcattgat
ggatttaatgaggacaagagcaactggatgcgctatgtgaatccaggccattctgttcag
gaacagaacttggctgcttgtcaaaatggaatgaacatctacttctacaccatcaagccc
atccctgccaaccaagaactacttgtgtggtattgtcgagactttgcagagagacttcac
tatccttcctccggagagctgacgatgatgaatctcacacaaggccacaataacccaaag
cagcaaagcactgataaagatgaactttatcagaaaagcatcccaaagaaagagcacagt
gtgaaagaaatcctgaaaactgaatccaacccttcaaaaggaaaggatttattccagacc
aacatttcaccgattactccagaaaaaaacttggatgatttaagaaaaaactgtagccct
gaaaggtgttttttcccacgggttatctatccaatccgacctcacatgccagaagactat
ttgaaagcttccctagcttatgggatggaaagacccaactatattacacagtctcccatc
cagtcttctaccacaccaagtccttcagcaaggagcagccctgaccaaagtttaaaaagc
tcaagccctcacagcagtccaggggttactgtttcacctctggcacctacttctcaagaa
cacagagaatcttacccttacttgaatggaccctatggctcagaaggattggggtcttat
cctggatatgcaccccctagccatctctctccagcctttttatcctcctataattcccac
tatccaaaattcctgttacctccatacagtatgagctgtaataacctgagcgctttgaac
aatatcaatggcatcaacaatttcaatctcttcccaaggatatatcctctctatggcaac
atactgggtggaggcagcctgtcccatcatgtgctaaaccctgctgctcttccaggttca
ctgccatctgaaggaagccgtagattgctacaacctgatcatccaagagactttctcata
ccagcacctaacagtgccttttccatcacgggcgctgctgccagcatgaaagacaaacca
tgcagccccacaagtgggtcccctcaagctggcacagcagctacttcagagcatataatg
caacctaaacctacctcagcagtgttggctgccaccagcagtgaagaagccatgaatctc
attaaaagtaagaggaacgtgaccggttacaaaacccttccatatccactgaagaagcag
aatgggaagatcaaatatgaatgcaatgtttgctctaaaacctttggccagctctcaaat
ctgaaggtccacctgagagtgcacagtggtgagaggcctttcaagtgtcagacttgcaac
aaagggtttacccaactggctcacctccagaagcactatctggtgcacacaggcgagaag
ccccatgagtgccaggtttgccataagcgattcagcagcaccagcaacctaaagacccat
cttcggctccactctggagaaaagccttaccagtgcaagttgtgccctgctaaattcacc
cagtttgtgcatctgaagctgcacaagcgtctccacaccagggaacgtccacacaagtgt
gtccactgtcataagagctacattcacctctgcagcctcaaagtccacctgaagggcaac
tgcccagtagcccctgcctccagcctctcaatggaggatctaaatcgtatcaatgaagag
atcgagaagtttgacatcagtgacaatgctgacaagctggaagatatggaggacaatatc
gacatgacatcagttgtggaaaaagaaatattgaccatgctcagaagagaaatagaagga
gctaatcttaaagtatctttgcagaggaacctgggaaatggacttatctcctcaggatgc
aacctctatgaatcttcagatatgtccattatgaagttgcctcatggtcatccactacct
ctgttaccgataaaggtcaagcaagaaacaattgaaccaatggacccttaa
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