Alligator sinensis (Chinese alligator): 102385426
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Entry
102385426 CDS
T02922
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
asn
Alligator sinensis (Chinese alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4998
CBM_4_9
NDNF
DUF4959
Motif
Other DBs
NCBI-GeneID:
102385426
NCBI-ProteinID:
XP_025057443
UniProt:
A0A3Q0GH02
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MPAWLVKVDRPEVLLDGLAPSTEYSIAVYAMYGEDTSDPASIQETTWALSPPRHLGFSEI
SHGSVRVSWEAASPDVKAHRVTYVSSQGSNTGEVRVPSGASSTTLKPLSSLTQYFISVRS
VYDEGDSFPLTGNVTTTKVPPPSAVKVTELSGNYVRLQWEAAAASDVVVYQIKWNVLGEE
KSQELSVAGNVANAVLPGLKKNTEYQISMWAYYKDGARSDTVSIQHRTSSRNPPTNLFID
SETTSSLQIHWTPPDGRIQHYRVTYAPKSDESARETIIASGKSSGVTLQSLLPSTAYKVM
VSAIHNTGESDTVSTTGHTASALTKFPSTRGFLPFKMEACPTLNSVEGSLQGFDIMEAFG
LVEKEYASIKGVAMEPYVFSGSRTYTLFRDTQLTRRTSETPLPGIPPEHTLSFVLRLLPE
TPKEPFAVWQITDEDFQPLLGVILDSSKKSLTYFNHDYKTDLQEVIFDQQEVKKIFYGSF
HKVHIAVSHFKIKLYLDCRKIAERPVNAVGSISTAGFVMLGKLTRTRGPRRTNKRYQIHP
KNLVSAIRRRPQQVHIAVSHFKIKLYLDCRKIAERPVNAVGSISTAGFVMLGKLTRTRGP
RSGSATFQLQSLQIVCNALWAEDDRCCELPALRDEETCPALAPACTCMSGVPGLPGPPGP
PGSPGRRGPQGEQGHPGPKGEPGPPGRVGPQGPGGQQGSPGSQGITVQGPVGPPGIKGEK
GDTGIPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGPPGPPGPRGFQGMAGSRGGGGEK
GPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQACERMIQTHVLKFDSFIHEHTRKP
VPMWDEKLMPGEPGLPGLAGPPGSRGERGEDGFLGLPGKDGYPGERGGPGPRGAKGMPGA
NREGVQGPRGRAGPPGEAVVGKPGPNGAPGSAGPRGFPGDRGQPGEPGYPGGCDLSGCYG
ASTRDFIP
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctggctggtgaaggtggaccggcctgaggtcctgctggatggactggcgccc
agcacagagtactccatcgcggtgtacgcgatgtacggggaagatacaagtgatccagcc
agcatccaggaaaccacctgggccttaagcccccccaggcacctcggtttctcagagatc
agccacgggtctgtccgggtcagctgggaagctgcgtcgcctgatgtgaaagcacaccgg
gtcacctatgtctccagccaagggagcaacaccggggaggtccgagttcctagcggagca
tcctccaccaccctgaaacctctgtcctctctcacccagtatttcatcagcgtcaggtct
gtttatgatgaaggtgactctttcccgctcaccggcaacgttaccacgacaaaagttcct
ccaccgagcgctgtgaaggttaccgagctctcaggaaactatgtccgtctgcaatgggaa
gcggccgcggcctccgacgtggtcgtctatcagattaagtggaatgtgcttggcgaggag
aaatctcaggagctctctgttgctggcaatgtggccaatgctgttttgccagggctgaag
aagaacacagaataccagatatcgatgtgggcgtattacaaggatggtgcacgaagcgac
acggtctctattcagcacaggaccagttccaggaatccacccaccaacctgttcatcgat
tcagagaccaccagcagcctgcagatccattggacacccccagacggccgcatccagcac
tacagagtgacctatgcccccaagtctgacgagagcgctcgggaaacaataatagcttct
ggtaaaagtagcggtgtgactcttcagtctctgctccccagcacggcatacaaggtgatg
gtttctgccatccacaacacaggagagagcgacaccgtgtctactactggccacactgct
tctgcattgactaaattcccttcaacacgaggatttcttcccttcaaaatggaggcttgc
cccactctcaactccgtcgaaggatctctacaaggatttgatataatggaggcttttgga
ctggtggagaaggaatatgcctccattaaaggagtggctatggaaccgtatgtgttcagt
ggctcccggacttacactctgttcagagatactcagctgacccggagaaccagtgaaaca
cccctcccggggatcccacctgagcacaccctcagcttcgtcctccggctcctgccagag
actcctaaagagccctttgctgtgtggcagataacagatgaagacttccagcctcttctt
ggtgttatacttgactccagtaagaaatccttgacctatttcaatcatgactacaagact
gatttacaggaagtcatctttgaccaacaggaagtgaagaagatattctatgggagcttt
cataaggtgcacatagctgtgagtcatttcaagatcaaactctacctggactgcaggaaa
atagcggagagaccagtcaatgcggtgggcagcatctccactgcgggctttgtcatgctg
gggaagctcacaaggaccagaggaccgaggaggactaataaaagatatcagattcaccca
aagaaccttgtctcagccattagaagacgaccacagcaggtgcacatagctgtgagtcat
ttcaagatcaaactctacctggactgcaggaaaatagcggagagaccagtcaatgcggtg
ggcagcatctccactgcgggctttgtcatgctggggaagctcacaaggaccagaggaccg
aggagtgggtcggccacctttcagctgcagtctttgcagattgtgtgcaatgctttgtgg
gcagaggatgaccgatgttgtgagctccctgcactgagagatgaagagacgtgtcctgct
ttggctcctgcctgtacctgcatgtccggtgtcccaggcctgccaggtccccccgggcct
cctggcagtccagggcggagaggacctcaaggggagcaggggcacccaggccccaagggt
gagccaggccctcctggacgggtcggcccccagggtcctggcggacagcaaggctctccg
ggatcccaaggaatcaccgtgcaaggtccagtgggaccaccagggatcaaaggggagaaa
ggagacacaggaatcccaggcatgcagggtattcctggtgtccagggagctccaggcaga
gatggccttcagggagccaagggggtgagaggactggagggcacagccgggcctccggga
ccacccggaccaaggggtttccaagggatggcaggctctcgtggcggcggtggagagaaa
ggacctccaggggacgttggaccaactgggctgcctggtcccaaaggagaaaggggtgag
aagggtgaaccgcagtctctggccacaatttaccagctagttagccaggcttgtgagcgg
atgattcagactcacgtgttgaagtttgactcattcatccatgaacataccaggaagcca
gtccccatgtgggatgagaagttgatgccaggagagccgggactgccgggtcttgcaggt
ccccctggaagcagaggagaaagaggagaagatggcttcctgggactgccaggcaaagac
gggtatccaggagaaagaggaggaccaggaccaaggggtgcaaaggggatgcctggagca
aatcgggaaggagtccaaggacccaggggacgagcaggaccaccaggagaagccgtggta
gggaaaccaggtccgaacggggcccctggaagtgctggcccacggggctttcctggtgac
agaggccagccaggggagcctggctatccagggggctgcgatctctctggatgctatggg
gcgagtaccagagatttcatcccatga
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integrated database retrieval system
