Alligator sinensis (Chinese alligator): 102386411
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Entry
102386411 CDS
T02922
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04137
Mitophagy - animal
asn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102386411 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102386411 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asn04121
]
102386411 (AMFR)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
102386411 (AMFR)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102386411 (AMFR)
Multi subunit type E3
ERAD complex
102386411 (AMFR)
LMBR1L-GP78-UBAC2 complex
102386411 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
102386411
NCBI-ProteinID:
XP_006020285
UniProt:
A0A1U7RU08
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGL
VFLHLMVQLCKDRFEYLSFSPTTPLSSHIRVLTLLIAMLLSCCGLAVVCGVIGNTHGMHT
LAFMAAESLLVTVRTSHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHRVREDHQ
RENLDENLGPVAVAEGRPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALN
SPVERHNSDQEDTETATQVSTIQNWLLLTAFRGQNQQMRLWNSIFLLNLNKLFP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgctaaattaatccagtgcatggtgtttggtcctcttcgagtcagtgagagg
cagcatctcaaggacaaattctggaatttcatcttctacaagtttatatttatttttggc
gtgctcaatgttcagacggtggaagaagttgtcatgtggtgcctttggttctctgggctg
gtgtttctccatctcatggtacagctctgcaaggatcggtttgaatatctttctttctcc
cccaccacaccattgagcagccacatcagagtccttactctgctgattgccatgttactc
tcctgttgtggattagcagttgtttgcggtgttattggcaatacccatggaatgcacact
ctagccttcatggcagcagagtctctgcttgtgacagtgagaacaagtcatgtgatttta
cgttatgtaattcatctctgggatctcaaccatgaaggaacatgggaaggcaaaggaact
tatgtgtattatacagattttgtcatggaattaaccttactttcactggacttaatgcat
catattcacatgttgctatttggcaacatctggttgtcgatggccagcctggtgatcttt
atgcagctgcgttacctgttccatgaggttcagcgtagaatccgccgtcataagaactac
ctgcgtgtggttggaaacatggaagccaggtttgcagttgcaactcctgaagaactcgct
gttaataatgatgattgtgccatttgctgggactccatgcagtctgcacgtaaacttcca
tgtgggcacctctttcacaactcatgcctacgatcctggcttgaacaggatacatcctgc
cccacctgcagaatgtctcttaatatcacagacagtcatcgggttagagaggaccatcaa
agagagaacctggatgagaacttggggcctgtggcagtagcagaaggcagaccccacttg
aaccaacataatcacttcttccattttgatggttctcgtattgctagctggctacccagt
ttttcagtggaagtgatgcatactaccaatatccttggtattacacaggcaagcaactcc
cagctcaatgctatggcacatcagattcaagagatgtttcctcaggttccataccatcta
gttcttcaggatctgcagctgacccgctctgtagaaataacaactgacaacatcttagaa
gggcgtatccaggtgccctttcctacacagcgtgcagatagcattagacctgcattaaac
agtcctgtggaaaggcataattctgatcaggaggatactgaaacagctacccaggtatcc
acaatccaaaactggctcttgttgacagccttcagaggccaaaaccagcaaatgaggctt
tggaattcaatttttcttctcaacctcaataagcttttcccttaa
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