Alligator sinensis (Chinese alligator): 102386498
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Entry
102386498 CDS
T02922
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102386498 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asn03032
]
102386498 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102386498 (TOPBP1)
DNA replication proteins [BR:
asn03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102386498 (TOPBP1)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102386498 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
102386498
NCBI-ProteinID:
XP_014374003
UniProt:
A0A1U8CY68
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MKSDKEPFFVKFIKSSGNSEYFFKALESIKEFQSEEYLQILEEAAALDIKENDQSLYICD
PFSGIVFNHLKKLGCRIVGPQVVIFCMQHQRCVPRAEYPVYNMAMADITISCTSLEKEIR
EEVHKYVQLMGGRVYKDLNVSITHLIAGEVGSKKYLVAATLKKPILLPSWVKALWEKSQQ
GMTSCKDLNMEDFICPLFRGCTICVTGLSSLDRKEVQHLATKHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVPIQWFFESIERGFCQNELMYKVELGPKQDDTPSTSTPTNQ
ASKPDSRTLSDVSHISNISLSGINETAFSSAMNSKLDPPPDDLENLDISSFESHEDLLDG
CRIYLCGFSGRKLDKMRRLINNGGGVRFNQLNEDVSHVILGEYDDELKQFLNKTTHRPHV
VTAKWLLESFRKGHLLPMEQYIPANYQPIENPILGQPGIKPALPKSSNLSKKETVSLVQY
QEADEDDLLSQYINNDSTLVENEKLDSGKLSDTNVQEENQSSVYHGSMAETSTGIEGGLF
NRKSFLLLGFGEEDESCIADLIKENSGKVLSLQSRVNADYAVVPLLGCNVDSTVDVVTNT
WLFVCVEQQLLLNPLSNPLFTPVPVMEGCTPLEDCVLSFSQFIGAERDSLVYLAGLLGAR
VQEFFVRRCNPKKGMLASTHLVAKEPDGSKYEAAKKWDLPAITMAWLLQSARMGKKADES
KFLVENIDTEDKESFITQPSKAEAAPVTLEASDHPSSLLETRNKTAVTPLDMNRFQSKAF
QAVISHHIGKKPSPPAEGRPLQKEPSLHLDTPSKFLSRDKLFKPSFDVKDALAALETPGG
PDQRNRKQSTPLSEVIGRNLKLALANSARYTTTLSASPQLRAAQTEVEEEPKPLADVVIC
VSKKLSKKQSELNSIAASVGADYRWCFDETVTHFIYQGRQNDSNKEYKSVKERGIHIVSE
HWLLESAQENKRLPESLFPHTYNPKMSLDISAVQDDRLSSGRFSSTGKMGKENEDVLLDE
DNPGNETTDQIKEVFMEEEEQIAANEPKGVLTQTLEMRENFQKQLQEIMSATSIVKPQGQ
RGSLSRNSFDNSPSTPDSTRSMRNGRSRVLEALRQSRQAVMDMNTEPSQNEQIIWDDPTA
REERARLVSNLQWPNSPSQCSEQIQTNVNNTDEPPVRKPLTEMETADSAVRDVENAGITE
VSRSQGVRTPETPVQDDHLIPTPQAPSIAFPLANPPVAPQPKEEVVIADEVDEEPEKQRK
FQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPSCTHTVVGHPLRNEKFLASMAAGKWVL
HRSYLEACRAARCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKNIHKRKQETG
IAEGAFSGWKVILNVDKAKEAGFKRLLQSGGAKVFPGHSSALFKEATHLFADFSKLKPDD
SRVSVVDAAAQGVNCLKPEYIADYLIQEPSPPVDCYCLPEAVPYLQNSREPGIRSSQKRK
APGETSNVKRSRIY
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgacaaggagcctttttttgtgaaatttataaagtcttctggaaattctgaa
tatttttttaaagctcttgagtccataaaagaatttcagtcagaagaatatctccagatt
cttgaagaagcagctgcacttgatataaaagagaatgaccagtccctttatatctgtgac
ccatttagtggcattgtttttaatcatctcaaaaagcttggctgtagaatcgttggacca
caggtagtcatattttgcatgcagcaccagcggtgtgtccctagagctgaatatcctgtt
tataatatggctatggctgatataacaatatcctgtaccagccttgaaaaagaaattagg
gaagaagttcataagtacgttcagttgatgggtggccgtgtatacaaagatctcaatgtg
tctataactcatcttatagctggagaagttggcagcaagaaatatttagtagctgctaca
ctgaagaaaccgattttgcttccctcttgggtaaaagcattatgggagaagtctcaacaa
ggtatgacaagttgtaaagacctcaacatggaagacttcatctgtcctttgtttcgtggc
tgtactatctgtgtaactggtttaagcagcttggataggaaggaggtccagcatcttgct
accaaacatggtggtcaatacacaggacagctcaaaatgaatgaatgcactcacctcatc
gttcaagagccaaaaggccagaaatatgaatgtgccaaaaaatggaatgtgcactgtgtc
cccatccagtggttttttgagagcattgagagaggcttctgtcaaaatgaattgatgtat
aaggtagagcttggaccaaaacaagacgatacacccagtacttcaacacctactaaccaa
gccagcaaacctgacagtcgtacactttcagatgtcagccatatttccaatattagtttg
agtggcattaatgaaacagcctttagttctgctatgaacagcaagctggatcctcctcct
gatgacctggaaaatttggatatcagttcttttgaaagccatgaagatttactagatgga
tgtcggatttatctttgtggcttcagtggcaggaagttagataagatgagaaggcttatt
aataatggtggtggtgttcgattcaatcagctcaatgaagatgtctcccatgtcattttg
ggtgaatacgatgatgaattgaaacagtttttgaacaagacaactcacaggcctcatgta
gtgacagcaaaatggctgctggaatcttttcgtaaaggtcacctacttcccatggaacag
tacattcctgcaaactaccaaccaatagaaaatccaattttggggcaacctggaattaag
ccagctcttcccaaaagcagtaatctctcaaagaaggaaactgtgagccttgtacagtac
caggaagcagatgaagatgacctcctctctcaatatataaataatgattccacattagtt
gaaaatgaaaagcttgactctggcaaattgagtgataccaacgtccaagaagagaaccag
tcgtctgtctatcatgggtccatggcagagacttctacagggattgaaggaggtttattc
aacagaaaaagcttccttcttttgggttttggtgaagaggatgagtcgtgcattgcagat
cttataaaggagaactctgggaaagttctttctcttcagagcagagtgaatgctgactat
gctgtggttcctttactaggatgcaatgtggattcaactgtagatgttgttacaaataca
tggctgtttgtgtgtgtggaacagcagctccttttaaaccccctttccaacccacttttc
acaccagtaccagtaatggaaggatgcactcctctggaagactgtgttctttcttttagc
cagttcattggtgcagagagagactccctggtgtacttggcaggtctgctaggagcaaga
gtccaagaattctttgtgcgcagatgtaatccaaagaaaggaatgttagctagcacccat
cttgtggcaaaagaaccagatggatctaagtatgaagctgcaaagaagtgggacttgcct
gcaatcactatggcttggctcttgcaatctgcaaggatgggaaagaaagcagatgagagc
aagtttttggttgaaaacatagacactgaagataaagagagtttcataactcagccttcc
aaagcagaggcagctcccgtgactttagaggcatcagaccatcctagcagtctccttgaa
accaggaacaaaacagctgtgactcctcttgatatgaatcggttccagagtaaagctttc
caagctgtaatctctcatcatattgggaaaaagccatcccctccagcagaaggaagacca
ctccagaaagaaccgtctttacaccttgacacaccatccaaatttctttccagagacaag
ctcttcaagccttcatttgatgtcaaggatgccttggcagctttggaaactccagggggt
cccgaccagagaaacagaaaacagagtactcctctctctgaagtcattggcaggaacttg
aaactggctctggcaaacagtgcacgttatacaacaactctttctgccagccctcagctg
agggctgcacaaacagaagtggaagaagaacccaaacctttggctgatgtagttatatgt
gttagtaaaaaactaagtaagaagcagagtgaactgaattctattgcagcttctgttgga
gcagattacaggtggtgctttgatgaaacagtaactcacttcatctaccaggggcgacaa
aatgacagcaacaaggagtacaagtctgttaaagaaaggggcatacacattgtttcagag
cattggcttttagagagtgcacaagaaaataaacggcttcctgaatccctgtttcctcac
acctacaatcccaaaatgagcctggatattagtgcagtacaagatgacaggctctcctcc
ggtcggttttcatcaactggaaaaatgggaaaagaaaacgaggatgttttgttggatgaa
gataacccaggaaatgaaactacagatcagataaaagaagtattcatggaagaggaagag
caaattgcagcaaatgaacctaaaggagttttaacccagacattggaaatgagagagaac
tttcaaaaacaactacaggaaatcatgtctgccacatcaatagtgaaaccacaaggacaa
agaggatccctgtccaggaacagttttgacaattctcctagcacacctgatagcacacga
tctatgcgtaatggccgtagtagagttttggaagctctcaggcaatcccggcaagcagtg
atggacatgaatacagaaccatcacaaaatgaacagattatctgggatgaccccactgca
agagaggagagagcaaggcttgtcagcaatttgcagtggcccaacagtccttcccagtgc
tctgaacaaattcagactaatgtaaataatacggatgagccccctgtcaggaagccctta
actgaaatggaaactgctgattcagctgtccgtgatgttgagaatgcaggcataactgag
gtctcaaggagccaaggggtcagaactccagaaacccctgtacaagatgatcatttgatc
cccacaccacaagccccaagcattgccttcccactagctaaccctcctgtggctccacag
cccaaagaagaggttgttatagcagatgaggttgatgaagaaccagaaaagcagcgtaaa
ttccagctgtcttctcttaatcctcaagagcgatttgactactgtcatctgattgaagaa
ctaggtgggatagtgctggagaagcagtgttttgatccaagttgtacacacactgttgtg
ggacatcctcttcgaaacgaaaaattcttggcctcaatggcagctgggaaatgggtcctt
caccgttcttacctagaagcatgcagagcagccaggtgctttgtacaggaggaagattat
gaatggggaagcaactccatactcaatgtattacctggaatcaacgtaaaccagaagaaa
ctagcacttgcagctatgagatggaggaaaaacatccataaaaggaagcaagaaactggc
atcgctgagggggcattcagtggctggaaagtgattttgaatgttgacaaagccaaggaa
gcagggttcaagcgtcttcttcagtcaggcggtgcaaaggtgtttccaggtcattcttca
gctttgtttaaagaagctactcacctttttgctgacttcagcaaactgaaaccagatgat
tccagagttagtgttgtggatgctgcagcccaaggagtgaactgtttgaaacctgaatac
attgctgactaccttatacaggagccttctcctccagtggattgctactgtctgccagaa
gctgttccttacctacaaaatagcagagagcctggaatcagatcatcacagaagagaaaa
gcacctggagaaacaagcaatgtcaaaagatccagaatctactaa
DBGET
integrated database retrieval system
