KEGG   Alligator sinensis (Chinese alligator): 102386580
Entry
102386580         CDS       T02922                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102386580 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asn03400]
    102386580 (APTX)
Enzymes [BR:asn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     102386580 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     102386580 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     102386580 (APTX)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102386580 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102386580 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FtsK_SpoIIIE_N FHA LRRFIP
Other DBs
NCBI-GeneID: 102386580
NCBI-ProteinID: XP_006019711
UniProt: A0A1U7RKE4
LinkDB
Position
Unknown
AA seq 393 aa
MPSPVAFGSGTFCASEPAAVTGGIRISPAATAPSSPTQPLVSAIMLVCWLVRRDKCCPRI
KLPHLKTVVIGRGPETEITDKKCSRQQVQLKADCNKGYVWIKQIGVNPASIDLVNIGKDE
EVKMKPGQVLHIVNKLYPCTIQFLEEAGDPGTVSQGRLKAEKRSSEDSRNGNTENGSAKS
MKMEASDLEDTNKSGSVGSSFTSPSASSLSQKEYLGHWSQGLKVSMQDLKQQVYKDERVV
AIKDKYPKARYHWLILPWDSISSLKSVTKEHLGLLEHMHAVGEKLVHQCPERENLQFRLG
YHAIPSMSHIHLHVISQDFDSPCLKTKKHWNSFTTEYFLNSQDVIEMIKTKGKVLVSGGT
SELLKLPLRCHVCRQPQSTIPQLKEHLKKHWPN
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgccatcacctgtggcatttggcagtggtacgttctgtgcaagtgagccagctgcagtg
acggggggcatacggatatctcctgcagcaacagcaccttcctcccccacccagcctttg
gtcagtgcaataatgcttgtgtgttggctggtgaggagagataaatgctgcccaagaatc
aagctgcctcacttaaaaacagtagtgatagggcgcggcccggagacggagataacagac
aaaaaatgttcacggcagcaggtacagctaaaagcagactgtaataaaggctatgtctgg
atcaaacagataggtgtgaatccagccagcattgatttagtgaatattggcaaagatgaa
gaagtgaaaatgaagccagggcaggttctgcatattgtgaataaactttacccctgtact
atacaattcttggaagaagcaggagatcctgggacagtgtcacaggggaggttaaaagct
gagaagaggtcatctgaagactctaggaatggtaacacagaaaatgggtctgccaaaagt
atgaaaatggaggcatcggatttggaagatactaacaagtcgggcagtgtcggcagttct
tttacgtctccatcagcaagctctctaagccaaaaagaatatttaggacattggagtcaa
ggcctgaaggtatcaatgcaagatctaaaacagcaggtctacaaagatgaaagggttgta
gcaattaaggacaagtatcccaaagctcgttaccactggctcatcttaccttgggactcc
atctccagtttaaaatctgtgacaaaagagcatcttggactactggaacacatgcatgcc
gttggtgaaaagttggtccaccagtgtcctgagagagagaacttacagttcaggctgggt
taccatgctattcccagcatgagtcacatacatctgcatgtaatcagccaggattttgat
tccccttgccttaaaaccaaaaagcactggaattcttttaccacagaatacttcttgaac
tcccaagatgtgatagagatgataaagaccaaaggaaaagtgctggtgagtggtgggact
tcagaactcctcaagttgcccctcagatgccatgtgtgtaggcaacctcaatcaaccatc
ccacagttaaaggaacatctcaagaagcattggccaaactga

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