Alligator sinensis (Chinese alligator): 102386698
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Entry
102386698 CDS
T02922
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04517
IgSF CAM signaling
asn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102386698
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102386698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asn04812
]
102386698
Cytoskeleton proteins [BR:
asn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102386698
Intermediate filaments
Intermediate filament-binding proteins
102386698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
102386698
NCBI-ProteinID:
XP_025071828
UniProt:
A0A3Q0HMX1
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MDAEDHIKELQEQRMSMQKKTFTKWMNTIYYNGKVAIEIKDIYIEMKDGIYLLKLLELLS
RESLPRPTRGRMRVHFLENNSKAITYLKSKQVQVKFIGPENIVDGDRILILGLIWITILR
FQIASIKLDEEEFGEKADKLSANEALLIWCQRKTASYSNVNVQDFSRSWRDGLAFNALIH
VHRPDLIYYSSLRRDQPIKNLNNAFYVAQKELGITKLLDAEDVVVPNPDEKSIMTYVSLY
YHYFSKKKQDQTAQKRLTNIVFFLKEIDGLKSQYEQMTSELLKWIRQKVIELDDQHFPNS
LPEMQLLMARFKTFRTVEKPPKYQEKGMIEALFFNIRTKQRANNQQLYLPPDGKMLQDVE
KQWNILEKAENNRGKALQQEILRLQRVEQLAQMFRKKAVLRESYLKEMRMVIGKQDFWPD
SADKMEAATKKLEAIVTDAQPRKQRFIALATMAAVIEQENYHGKNQIMRKQADISQQWQD
LLEQLQRKRDALGAMQEILGLLREADTITEELKGLQALVSSQDCGKQLLEVVDLLQRHSL
IDSQISSYGDRVKFIAESTAVVTKAKAKAVKSDVLHAKIMMLGQQYQALVALSKSRQSQL
EEALKLFEFFHDCKEEELWISEKCQLVRTAALGRDPSQITASIQKHKALETECNSHKVIC
SNVMRKGWELSQRNPSRRTAIQKQTDSLQNLWQQFQDEVANRKIRLQAAALIKQYFADID
EAESWLRERQPLLDSKDYGKDEFSAEALLHRHMRLEKEITAYGLEMRRLKEQANAVAKEA
PSAVAKIQVPSTQNERIAKMPSGYLGIPKTPLSSAPDPDHHFIADNIWRTQNRIDWLYEN
LQMMAENRKKALEEMIRLYCFYSSCEEFQSWMEDKENVFRTLQPEADNVEVMQQKYQSFL
MELAAGKSQMEKIKFQADKLANNSPIKKNDIHVQLIEINRRWALLETLKEEKGSELIEVA
DVRTFLQDCQSTKVLLQDKLGYLKNLDPGNTPAAAEADRRKLSSFKMEILVLERKIEYLK
NVAKKIKDTNPAESRAITNQVETMERLLANLKLQNEEKDTTLELAQKQQAFLQDSRRLLL
WADCVREKLSSEEMGVDVTSAEQLLREHQDLLKEIHTQKERFVQLQGXXXXXXXXXXXSR
AQELGLSTDRLAKETSELEKMWEQRRQKLEEGLELQKFNREVDRLRAALSSHEAFLRVDE
LGDHVDAVRSLLKQHKNFEQLLIALKRRGEAMNDHGKKLVERRHFASSTIQEKITTFQEK
WKWLKQSSEQRKQKLLASLQLQEFNHDVAELLIWMEEKYKIASDESYRDPTNILRKLKWH
EAAEKEMMAHKEHFAELLKTGNQLIRDEHYAADSIQAKISELKKKWEKLYNRMVERGDKL
RQAGQQEQLMELLQDSKEKIEKIEKVLQDAETGHDLRSSRDLLKQHSQLENETHELAEKM
NSIVSHAKKMATNHFDSQRILDETQKYLQRFESLQVPLNKRHQLLQATVDLYQFYHYHDM
EMNWIKERLAIAKSTKCGKSLDASQSLLQKHKELQAEVNAHKQQVHRVLHKGKTMAEYKH
PSSQIILEKCQELVTSWMELEKSCEERMKQLQHTVGFQQFLMHTSDLETWVAEKLPFVTS
GDYGKDEAATLKLLKKHKALEQEIRVYQNMRNELGETAKAHLLPGFIQFDEADAPQEQVH
SKFQDLQEKATARRKKLDETLVLHEFLREYEDLQDWISQQRQVASSDDYGSDYEHVLDLC
AKFETFRHQLATAANRVAACQQLAENCLLKHGYSESREIRQEQKELRNSWEELLEMTRVR
VKQLQEAEKIHKCCQDLTDALTHIEEKAKSIPDDIAKDLSGVLSQLRKHAALEHEISGNE
QQLQELIEAADDVLAHYSESQVASLRAKQQAVVNNWESLKSKMKLRKEHLEQASKLYQFQ
AD
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaagaccacatcaaggagctgcaagagcagcgtatgtccatgcagaagaaa
accttcaccaagtggatgaacactatctactacaacggcaaagtggctattgaaataaaa
gacatctatatagagatgaaagatggcatttacctgctgaaactattggagctactttct
agagaatcattgcccagacctacccggggaaggatgagggtacattttctggagaacaat
agcaaagctattacatacctcaaatctaagcaggtgcaagtaaaatttattgggcctgaa
aatattgtagatggggaccgaatcctaatcctgggactgatctggatcactatcctccgg
tttcagatcgcttccatcaaacttgatgaggaggagtttggagaaaaggctgataaactg
tctgccaatgaagccttgctgatttggtgtcaacgtaagactgccagttactccaatgtg
aatgtgcaggacttctccaggagctggagagatggcctggctttcaatgccctcattcat
gttcacaggcctgatctcatctactacagctcactgagacgtgatcagcccatcaagaat
ctgaataatgccttctatgtggcacaaaaagagctgggaatcactaaacttctggatgct
gaggatgtggtagtgcccaatccagatgagaaatccatcatgacttatgtgtcactctac
taccactacttttccaagaagaaacaggaccagactgcccaaaagaggctcactaatatt
gtgttctttctaaaggaaatagatggtttgaagtctcagtatgagcagatgacctccgag
ctcttgaaatggattagacagaaggtgatagaactggatgaccaacacttccccaactct
ctaccagaaatgcagctcctcatggccagattcaagaccttccgcacagtggagaagccc
cccaaataccaagagaagggcatgattgaagccctcttcttcaacatcagaaccaaacag
agagccaacaatcaacagttatatcttccccctgatggcaagatgctgcaagatgtggaa
aaacagtggaatatcctggagaaggcagagaacaatcgggggaaagcattgcagcaagag
attctgaggctccagagagtggaacaactggcccagatgttcaggaagaaggctgtcctg
cgtgagtcctatttgaaagaaatgagaatggtgattgggaagcaggacttctggccagac
agcgcagacaaaatggaggctgctacaaagaaactggaagccattgtcactgatgcgcag
cctaggaagcaacgcttcatagctttggctacaatggcagctgtcattgagcaggagaat
taccatggcaagaaccaaatcatgaggaagcaagcggacatttcacaacaatggcaggat
cttctggagcaactgcagaggaaaagagatgctctgggagcaatgcaagaaattctggga
cttctgagggaagcagatacaattacagaggaacttaaaggactgcaggcacttgtgagt
tcccaagactgtgggaagcagctactggaggtggtagatttgcttcagaggcacagcttg
attgactctcagatctcttcctatggtgacagagtgaaattcatcgcagaaagtacagca
gtggtcactaaagccaaagcaaaagcagtcaagtcagatgtgcttcatgccaaaattatg
atgctcggtcagcagtaccaagcccttgtggctctcagcaaatctcgacaatctcagctg
gaggaggctttgaagctttttgaattttttcatgactgcaaggaggaagagttgtggatc
tctgagaaatgccagctagtgagaacagctgcattaggacgagatccgagtcagatcaca
gcctccattcaaaagcataaggctctagaaactgaatgcaactcccacaaagtgatttgt
tccaatgtaatgaggaaaggctgggagctaagtcaaaggaacccttcacgacggacagct
attcagaagcagacagacagcctccaaaacctgtggcaacagttccaggatgaggtggca
aaccgcaaaatccgtttgcaagcagctgctctcatcaaacagtactttgcggatattgat
gaagcagagtcatggctacgggaacgacagccactcctggacagcaaggattatgggaag
gatgagttcagtgcagaagctttgctgcaccgccatatgcggctggagaaagagatcaca
gcctatggcttagagatgaggcgtctgaaagagcaggccaatgctgtagcaaaggaagct
ccatctgcggtggcaaaaattcaggtcccaagtacccaaaatgagaggattgctaagatg
ccatctggctacttgggtatccctaaaactccattgtctagtgcgcctgacccagatcat
cacttcattgcagataatatttggaggacccaaaatagaattgactggctttatgaaaac
cttcagatgatggctgagaacagaaagaaagctctggaagagatgatccgattatactgc
ttctacagctcctgtgaagagtttcagtcatggatggaagataaagagaatgttttccgg
acccttcaacctgaagcagacaatgtggaggtcatgcagcagaaatatcagagcttctta
atggaactggctgctggaaaaagccaaatggaaaagatcaaattccaagcagataagctt
gcaaacaacagtcccatcaaaaaaaatgacatccatgttcagctgatagagatcaatagg
aggtgggcgctcctggaaacactcaaggaggaaaagggttcagagctgattgaagtggct
gatgtgaggacattcctccaagactgccagagtaccaaagtactgctgcaagacaagctg
ggctacctcaagaacttggacccaggaaacacacctgctgcagcagaggcagataggcgc
aagctgtcttcatttaagatggaaattctagtgctggagaggaaaatcgaatacttgaag
aatgtggctaaaaagattaaggataccaacccggcagagagcagggctatcacaaatcag
gtggagaccatggagagactactggcaaacctcaagttacagaacgaggagaaggatacc
accctggagctagcgcaaaaacaacaggccttcctgcaagacagtcgcagactcctcctt
tgggcagattgtgttagggagaagttgagcagcgaggagatgggtgtggacgtgacctct
gcagaacagttgctgagggagcatcaggacctactgaaggaaattcacactcaaaaggag
aggtttgtgcagctgcaaggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagcaga
gcccaggagttgggcctgtccacagacaggcttgcaaaggaaaccagtgagttggagaag
atgtgggagcagcggaggcagaagctggaagaaggcttggaactgcagaagtttaacagg
gaagtagatcgtctcagagcagccctctccagtcatgaagcttttctccgagtagatgaa
cttggggaccatgtagatgctgttcgcagcctgctaaaacagcacaagaattttgaacag
ctcctgatagcactgaagcgacggggagaagcaatgaatgatcatgggaaaaagctggtg
gagcgcagacactttgcttcttccacgatccaagagaaaataaccactttccaggaaaaa
tggaagtggctgaaacaaagcagtgaacagaggaaacaaaagctactggcttctcttcag
ctgcaggagttcaaccatgatgttgctgagctcctaatatggatggaagagaaatacaag
attgcatcagatgagtcgtatcgtgacccaacaaatattctgcgtaaactgaagtggcat
gaggcagcagagaaagaaatgatggcccacaaagaacactttgcagaacttctgaagact
ggaaatcaacttattagagatgaacattatgctgcagattccatccaggccaaaatatca
gaactaaagaagaagtgggagaaattgtacaacaggatggtagaacgaggagacaagcta
aggcaagctggacagcaagaacagcttatggaactgctccaggactccaaagagaagata
gaaaagattgaaaaggttcttcaagatgcagagacaggccatgatttgcgctccagccgt
gatctcctcaagcagcacagtcagctggaaaatgaaacacatgagctggctgagaaaatg
aactctattgtgtcccatgcaaagaaaatggcaactaatcactttgactcccagaggatt
ctagatgagacacagaaatatctgcaaaggtttgagtccttgcaggtgcctcttaataag
aggcatcagctgctgcaggcaacagtggatctgtaccagttctaccattaccatgacatg
gagatgaactggatcaaagaacgactggccattgccaaatccaccaaatgtggcaaatcc
ttggatgcgagtcaaagcctactgcaaaagcataaggaattgcaggcagaagtgaatgct
cacaagcagcaagttcatagagtccttcacaaaggaaaaactatggctgaatacaagcac
ccttcatctcagataatactggagaaatgccaggagcttgtcaccagctggatggagctg
gagaaatcatgtgaggagaggatgaagcagctgcagcacactgttgggttccagcagttt
ttaatgcatacttcagacttggaaacttgggtagcagagaagcttccctttgtgaccagt
ggggactatggtaaagatgaagctgcaacactgaaacttctcaagaaacacaaggcactg
gaacaggagatcagagtttaccagaatatgaggaatgagctgggtgaaacagccaaagca
catcttctcccaggcttcatccagtttgatgaggctgatgcgccacaggagcaggttcac
tcaaagttccaggacttgcaggagaaggctacagcaagaaggaagaagctggatgagact
cttgttctgcatgagttcctgagggagtatgaggacctacaggactggatcagtcagcag
aggcaagtggctagctctgatgactatggcagtgactatgaacatgtcctggatctttgt
gccaaatttgaaacttttcggcaccagctggcaacagctgccaacagagttgcagcttgc
cagcagttagcagagaactgcttgttgaagcatgggtactctgaatccagagagatccgg
caggaacagaaagaactacggaattcctgggaagagctactggaaatgaccagagtacgg
gtcaaacaactgcaggaggctgaaaagattcacaagtgttgccaagacctgacagatgcc
ctcacccatattgaggagaaggccaagagcatcccagatgacattgcaaaagacctgagt
ggtgtgctgtcccagctacgcaagcatgccgcccttgagcatgaaatctctggaaatgag
cagcagctgcaagagctgattgaagctgcagatgatgtgctggcccactactctgaaagc
caggttgcaagcctgagagcaaaacagcaggccgtggtgaacaactgggagtccctgaag
tctaaaatgaaactgcgcaaggaacatttggaacaggcgtctaagctttaccagtttcag
gccgac
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