Alligator sinensis (Chinese alligator): 102387012
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Entry
102387012 CDS
T02922
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn00260
Glycine, serine and threonine metabolism
asn00630
Glyoxylate and dicarboxylate metabolism
asn00670
One carbon pool by folate
asn01100
Metabolic pathways
asn01200
Carbon metabolism
asn01230
Biosynthesis of amino acids
asn01240
Biosynthesis of cofactors
asn04981
Folate transport and metabolism
Module
asn_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102387012 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102387012 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102387012 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102387012 (SHMT1)
Enzymes [BR:
asn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102387012 (SHMT1)
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Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
102387012
NCBI-ProteinID:
XP_006024097
UniProt:
A0A3Q0GL25
A0A1U7RQE9
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MDSNRGHSPGCDWLGRAGARPNSARPGADWLGEEVGESERSILAREPRAGERLRASERDC
IDARGDLAMATPTNLNGELPSAEIWQSHNKMVLEPLDTNDPEVFNIIKKEKQRQRLGLEL
IASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTECVDELERLCQKRALEAYNLDPQK
WGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESM
PYKVDPSTGYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRRIATENGAYLLADMA
HISGLVAAGVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETPYNLES
LINQAVFPGLQGGPHNHAIAGIAVALKQARTPEFRVYQRQVVANCKALAAALLGMGYHIV
TGGSDNHLILVDLRSKGTDGGRAERVLEICSIACNKNTCPGDKSALRPSGLRLGTPALTS
RGFREQDFHRVAVFIHKGIELTLRVQSDMSPKATLKEFKEHLGNEKYQGPLQALKEEVEA
FAATFPIPGLPVL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggactccaaccggggacactcccccggctgtgattggctcgggcgggcaggggcgcgg
ccgaactctgcccgcccgggagcggattggctgggggaggaagtgggagagtctgaacgt
tccatcctagcgcgggagccgcgggcgggcgagcgactgcgggcgtcggagcgggactgc
attgatgccagaggggacctggccatggctaccccaaccaacctcaacggtgagctcccg
agtgctgaaatctggcagtcgcataacaagatggtcctggaaccgctcgataccaatgac
cccgaggtattcaacatcatcaagaaggagaagcagcggcagaggctgggcttggagctg
atcgcctccgagaactttgccagccgggctgtgctggaggccctgggctcctgtctgaac
aacaagtactcggaggggtacccagggcagaggtactatggcggcacggagtgcgtggac
gagctggagaggctgtgtcagaagagggcactggaggcctacaacctggacccccagaag
tggggtgtcaatgtccagccctactcagggtccccagctaactttgcggtatacacggca
ctggtggagccccacggcaggatcatgggcctggacctgcctgacggggggcacctgacc
catggcttcatgaccgagaagaagaagatctcagccacctccatcttcttcgagtccatg
ccctacaaggtggatcccagcaccgggtacatcgactacgaccggctggaggagaacgcc
cgcttgttccaccccaagctgatcatcgcgggggtgagctgctattcgcggaacctggac
tatgcccgcatgcggaggatcgccaccgagaacggagcctacctgctggccgacatggcc
cacatcagcgggctggtggcggctggtgtggtgccctcgccttttgagcactgcgatgtg
gtctccaccaccacccacaagacgttgcggggctgccgggccggcatgattttctaccgc
aaagggacacgcagcgtggaccccaagacgggcaaggagacgccctacaacctggaaagc
ctcatcaaccaggccgtcttccccgggctgcagggggggccacacaaccatgccattgca
ggaattgccgtggcactcaagcaagccaggacccccgagttcagagtctaccagcggcaa
gtggtcgccaactgcaaggccctggccgcagcgctgcttggcatgggctaccacatcgtc
actggtggctccgacaaccatctcatcctcgtggacctgcgcagcaagggcacagatggc
ggcagggctgagcgggtgctggagatctgctccattgcctgcaacaagaacacctgtccg
ggtgacaagagtgccctgcgcccgagcgggttgaggctaggcaccccggcgctgacctcc
cggggcttccgggaacaggacttccacagggtggccgtcttcatccacaagggcattgag
ctgacgctgagggtccaaagcgacatgagtcccaaggcgacgctgaaggagttcaaggag
cacctgggcaatgaaaagtaccaggggccactgcaggccctcaaggaggaggtggaggcc
ttcgctgcgacattccccatcccgggtctgcctgtgctttaa
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