Alligator sinensis (Chinese alligator): 102387596
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Entry
102387596 CDS
T02922
Symbol
TAF1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102387596 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asn01001
]
102387596 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102387596 (TAF1)
03036 Chromosome and associated proteins [BR:
asn03036
]
102387596 (TAF1)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102387596 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102387596 (TAF1)
Protein kinases [BR:
asn01001
]
Serine/threonine kinases: Other
TAF1 family
102387596 (TAF1)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102387596 (TAF1)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102387596 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Cac1_C
Ribosomal_L44
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
102387596
NCBI-ProteinID:
XP_025060831
UniProt:
A0A3Q0GM74
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MAEDESRRFRQAMGNLQPSRRPDEDEDDYDADCEDIDSKLMPPPPPPPVPVKKEEEKDAV
APASEERDGIILPSIIAPSSAASEKVDFSSSSDSESEMGPQEARQTESKEGKLTLPLAGI
MQRDATKQLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELTQEVQ
VQEGEATAEAGAEGKSPWEYEFAPPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDT
KPRVAEWRYGPAQLWYDMLGIPEDGSGFDYGFKLKDRKKDQETKGQGDDQDAGLMLEKDD
LLADEHFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASXXXXXXXXXXXNATAYNAQQGLN
RSGSLLNPPIPLSQKPSIAGVLGIAKSKEKQPPEQQVTLDEDKPWYSIFPIDNEELVYGR
WEDNIIWDDQAMETCLDPPVLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSR
ILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELR
QPFFPTHMGPMKLRQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGG
GEMFFMRTPQDLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKY
GETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDI
FVVGQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSE
SSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMISAEQRLK
DAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGC
GEGFSYVKIPNKPTQQKQDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIK
KLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLE
STEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDS
GNDKERSKKDRRDKKGLSSASGTSAGSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGK
EYVRCETVRKPSVIDAYCRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRN
QEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTE
EQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRR
VGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILEGIINDMRDLPNTYPFHTPVNPKVVKDY
YKIITRPMDLQTLRENVRKRQYPSREEFREHVELIVKNSAMYNGPKHSLTQISQSMLDVC
DEKLREKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFV
PDYYKVIANPMDLETIRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIV
NICYQTLAEYDEHLTQLERDISTAKEAALEEADLESLDPMTPGPYTPQPPDLYDTNTSLS
MSRDASVYQDESNLSAMDTPTTTPEKRGAQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKT
PAPEVEDADGDLADEEEGSAQQPQASVLYEDLLMSDGEDDDDDDDDDGSDEEGDNPFSSI
QLSESGSDSDVESNAVRPKQPHVLQENTRMGMDNEESMMSYEGDTGETSHVMEDSNISYG
SYEEPDPKSNTRDTSFSSIGGYEVSEEEEEEEEEEEQRCGPSVLSQVHLSEDEEDSEEFH
SIAGDSDLDSDE
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagatgagagccgcagattcaggcaggcaatgggcaacctgcagccgagtcgg
agaccagatgaagatgaggatgattatgatgcagattgtgaagatattgattccaagctg
atgccaccaccaccaccccctccagtgccagtaaagaaagaggaagagaaggatgcagtt
gctcctgcatctgaggaaagagatggcatcattctgccctccatcattgctccttcctct
gctgcctccgagaaggtggattttagcagcagctctgattccgagtcagagatgggaccc
caagaggccaggcagacagaatctaaggaaggcaaactcactctgcctctcgcaggaatc
atgcagcgggatgccaccaaacaattgccaagcgttactgagcttttccctgaattccgg
ccaggcaaggtgctacgtttccttcgcctctttggccctgggaagaatgttccatccgtt
tggcgtagtgcccgccggaaacgcaagaagaagcaccgggagctaactcaagaagtacag
gtccaggagggtgaagccacggctgaggcaggagcggaaggaaagtcaccctgggaatat
gagtttgctcctcctcctcctcctgagcagtgcctttcagatgatgagatcactatgatg
gcacccgtggagtccaagttttcccagtcaacaggagatatagacaaagtgactgatacg
aagcccagggtggctgaatggcggtatgggcctgcccagctctggtatgacatgttgggg
atcccagaggatggcagtgggtttgactatggtttcaaactaaaagacagaaagaaggac
caggagactaaaggacagggtgatgaccaggatgcagggttgatgttggagaaggatgac
ctactggctgatgagcacttcctcatggtgacacagctgcagtgggaggatgatgtgatc
tggaacggggaggacgtcaagcacaaagggactaagacacagcgagcaagcncnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnaatgccactgcctacaatgcccagcaaggcctgaac
cgtagtggctctttgctcaatccacccattccactttcacagaaacccagcattgcaggg
gttctgggcatcgcaaagagcaaagagaagcagccccctgagcaacaagttactctagat
gaagataaaccctggtactccattttccctattgataatgaggagttggtatatggccgc
tgggaagacaatatcatttgggatgaccaggcaatggaaacatgcttggatcctccagtc
ttgacacttgatcctaatgatgaaaatatcatcctggaaattcctgatgaaaaggaagag
atgactttgaattcaccctccaaggagaacaagaaggaatcttctttgaagaagagtcgg
atcctgttggggaaaacaggtgtcatcaaggaggaaccacaacagaatatgtctcagccg
gaggtgaaggatccctggaacctctccaatgatgagttttactatcccaaacagcagggc
cttcgaggaacttttggaggcaatatcatccagcattctatccctgcagtggagcttcgc
cagccgttcttccccactcatatgggtcctatgaagcttcggcaatttcatcgccctcca
ttgaaaaaatactcctttggggccttgtcccagccaggaccccatgctgtgcaaccactg
ctaaaacatattaagaagaaagccaagatgagagagcaggaacggcaggcttcaggaggc
ggcgagatgtttttcatgcgcacgcctcaggacctgactggcaaggatggtgacctcatt
ctggctgagtacagtgaggaaaatgcccctttaatgatgcaggttggcatggcaacaaag
ataaagaattactacaaacggaaacctggcaaggatcctggagccccagactgcaaatat
ggagagactgtttactgtcacacatctcccttcctgggatccctgcacccaggccagtta
ctgcaggcatttgaaaacaacctcttccgggctcctatctatctgcataagatgccagaa
actgatttcctcataattcggacccgacaaggctattacgttcgggagctggtggacatc
tttgttgttggtcaggagtgccctctttttgaagttccaggtcctaactctaaacgggct
aatacacacatcagagattttcttcaggttttcatttatcgcttgttctggaagagcaga
gaccggcctcggagaattcgcatggaagatatcaaaaaggcatttccttctcactctgag
agcagcattcgaaagcgattgaaactctgtgctgacttcaaacgtacagggatggactca
aattggtgggtgttgaaaccagacttcagattaccaacagaggaggagatcagagcaatg
gtgtcaccggaacagtgttgtgcctattacagcatgatttcagcagagcagcgactgaaa
gatgcgggttatggagaaaaatccttctttgccccagaggaagagaatgaagaggacttt
cagatgaagattgatgatgaggtgcgcacggctccttggaacaccacacgagccttcatt
gctgcgatgaaggggaagtgtcttttggaagtgactggggtagcagatcctacagggtgt
ggtgaaggattctcttacgtaaagatcccaaacaagccaacccaacagaagcaggatgat
aaggagccacaaccagtgaagaagacagtgacagggacagatgctgatctccggcgtctt
tctctcaaaaatgccaaacagctcttgcgtaaatttggagttcctgaagaagagattaag
aagctgtcccgttgggaagtgattgatgtggtgcgcacaatgtccacagagcaggctcgc
tcaggggaggggcctatgagtaaatttgcccgtggatctcggttctcagtggcagaacat
caggagagatacaaagaggagtgtcagcgtatctttgacttgcagaataaggttttggaa
tcaactgagatcttatcaacagacacggatagcagctcagctgaggacagtgactttgag
gagatgggaaagaatattgagaatatgttacagaacaagaaaacaagttctcagctgtcc
cgagagagagaggagcaagagaggaaagagttgcagaggatgcttctgggagaagacagc
ggcaatgacaaggagaggagcaaaaaggataggagagacaaaaaaggattgtcatcggct
tcaggcacttcagcaggctctcacaaagatgatgataccgcttcagtaaccagtctcaac
tcctctgccactggccgtcggctcaaaatctatcgcacattccgagatgaagatggaaaa
gaatatgtgcggtgtgagacggttcggaagccctctgtcattgatgcctactgccggata
cggactaccaaagatgaagagttcatacggaaatttgccctctttgatgagcagcaccgg
gaggaaatgcggaaggagcgacgcaggattcaagagcagctgcgccggctcaaacgaaat
caggaaaaggagaaactcaaaggtcccccagagaagaagcccaagaagatgaaggagcgg
ccagacctgaagttgaaatgtggagcttgtggtgcgattgggcatatgaggactaataaa
ttctgcccactgtactaccaaacaaacgctccaccctccaaccccgttgccatgacagag
gagcaggaagaggagctggaaaagacggtcatccacaatgacaatgaagagctcatcaaa
gtggaagggaccaaaattgtcctgggaaagcaactgattgagagtgcagatgaggttcgc
aggaaatctttggtcttgaagttccctaaacagcagcttcctccaaagaagaagcggcga
gtaggaaccactgttcactgtgattacttgaatcggcctcacaagtctatccatcggcga
cgaacagaccccatggtaactctgtcgtctatcctggaaggcatcatcaatgacatgagg
gatcttcccaatacgtacccctttcacacgcccgttaacccgaaagttgtcaaagattac
tacaagatcatcacacggccgatggatctacagaccctgcgtgagaatgtccgcaagcgc
cagtatccatcccgggaagagtttcgagaacacgtggaactgattgtgaagaatagtgcc
atgtacaatgggccaaagcactcactgacccagatatctcaatccatgctggacgtctgt
gatgaaaaactgagagagaaagaagataaactggctcgtttagagaaagcaattaatccc
ctcctggatgatgatgaccaagtggccttttccttcattttggataacattgtcactcag
aagatgatggcagttccagattcttggccgtttcatcatccagttaataaaaagtttgtt
ccagattattataaggtgattgccaatccaatggatctggagactattcgaaagaatatt
tccaagcacaagtatcagaacagagagacctttctggatgatgttaacctcattcttgcc
aacagcattaagtacaatggacctgacagtcagtacacaaaaacggctcaggaaatagtg
aacatctgttaccagacgctggctgagtatgatgagcacttgacacagctggaaagagac
atctctactgctaaagaagcagcactggaggaggcagatttagaaagtcttgaccctatg
actcccggtccctacacacctcagccaccagacttgtatgataccaacacttccctcagt
atgtcacgtgatgcttccgtctatcaagatgagagcaatttgtctgctatggatactcct
accactaccccagagaagcggggagcccagatgcgccagggacgaggtaggctgggcgag
gaagactctgacgtagatattgaagggtttgatgaggatgatgatgggaaacctaagact
ccagccccagaagttgaagatgcagatggtgaccttgctgatgaagaagaaggctcagcc
cagcagcctcaggccagtgttctgtatgaagatctgctcatgtcagatggagaagatgat
gatgatgatgatgatgatgatgggagtgatgaagaaggcgataatcctttctcatccatc
cagctaagtgagagtggcagcgattcggacgtggagtccaatgcagtgaggcccaagcag
cctcatgtccttcaagagaacacacgtatgggcatggacaatgaagaaagtatgatgtcc
tatgagggagatactggggagacatctcatgtgatggaggacagtaatatcagttatggc
agctatgaggaaccagatcccaagtctaacacacgagataccagttttagcagcattgga
gggtatgaagtctcggaggaagaggaggaggaggaggaggaggaagaacagcgttgtggg
cccagtgtgctaagccaggttcatctgtctgaggacgaggaggacagtgaggaatttcat
tccattgcaggagacagtgacctggactcggatgaataa
DBGET
integrated database retrieval system
