KEGG   Alligator sinensis (Chinese alligator): 102387727
Entry
102387727         CDS       T02922                                 
Symbol
ATG16L2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
  KO
K20868  autophagy-related protein 16-2
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:asn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102387727 (ATG16L2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asn04131]
    102387727 (ATG16L2)
   03029 Mitochondrial biogenesis [BR:asn03029]
    102387727 (ATG16L2)
Membrane trafficking [BR:asn04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    102387727 (ATG16L2)
 Others
  Specific organelles associated proteins
   Auto phagosome
    102387727 (ATG16L2)
Mitochondrial biogenesis [BR:asn03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102387727 (ATG16L2)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ATG16 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_DCAF4 eIF2A Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_HPS5 PspA_IM30 Ge1_WD40 DUF7310 Cytochrom_D1 B-prop_COPA_B_2nd TolA_bind_tri
Other DBs
NCBI-GeneID: 102387727
NCBI-ProteinID: XP_025047663
UniProt: A0A3Q0FPR5
LinkDB
Position
Unknown
AA seq 654 aa
MPPIPSSCSCGPFQQCCTMPCWAVGSGNTATVSSSATDSLWSWSSHLTVCLLDNTDPLAK
VLVDLPKNDAKHGCGCCVRPAFGGQDNKLLEKSNLLVQAQAMDLRTGLSPWSAWEPPSPV
LDPTVVLQTTKIKYQRQIAELKDLSGVLAYHIIELNTILKAKETELEVQRTRLASLQGQV
SELEGQHQQLRGQMKGLGWGNSAVKLEYDALRDCYRCRECELRREVERSQELTESLVRKK
AKAAEYKNYQNERFKRAKHDELSRQLKKVTNETISIDIGPEEVKPAKGKGPSQDFTKLED
CEKPGKRPFRSSSATSMTIARCVDVFKGLFDYRLKRGNSVSSRLESSYGYVPACLVACLP
SFISDIQEAHLSEVNAVKFCPSSTMLATGGTDKLIKLWNVVGGRLESVRTLEGANGSITS
IEFDPMGCQILAASYNKAVQLWKIEDCKSRETLTGHTDKVTAAKFRSTRYQAVRGSRDRT
VKEWDLGKGACCRTIDVCSYCNDVVCWENIIVSGHHDKKIRFWDSRGPRCTEVIPVEGKV
TSLHISQDQMHLLSCSRDNTLKVIDLKMNNVRQVFSADGFKCGSDWTKAIFSPDKSYILA
GSSDGTLYVWSMENGKLVTSLPGLHGASVNAVAWSPSGQHVVSVDQGKKVVLWK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgcccccgatcccatccagctgctcctgtgggccttttcagcaatgctgcactatgcca
tgctgggctgtgggctcaggaaacacagcaacagtttctagctctgccactgactctctg
tggtcttggtcaagtcacttgactgtgtgtctcttggataacactgaccctcttgcaaag
gtgcttgtggatctgccgaagaatgatgctaagcatggctgtggttgttgcgtgcgccct
gcttttggaggccaagataacaagctgctggaaaagtccaacctgctggtgcaagcccaa
gctatggatctccggacgggactcagcccttggtccgcctgggagccccccagccctgtg
ctggaccccacggtagtgctacagaccaccaagatcaagtaccaacggcagatcgcggag
ctgaaagacttaagcggtgtcctggcgtatcacatcatcgagctgaacacgatcctcaag
gccaaggagaccgagctggaggtgcagagaaccaggctggcctctctgcagggccaggta
tcggagctggagggccagcatcagcagctgcgggggcagatgaagggcctgggctggggc
aactcggccgtgaagctggagtacgacgcgctgcgggactgctaccggtgccgggagtgc
gagctgcgcagggaggtcgagaggagccaggagctgactgagagcctggtgcggaagaag
gccaaggctgccgagtacaagaactaccagaacgagaggtttaaacgggcaaagcatgac
gagctgtccaggcagctaaagaaggtgacaaatgagaccatcagcattgacattggccca
gaagaggtgaagccagccaaggggaaggggcccagccaggatttcaccaagctggaagac
tgcgagaagccagggaagagaccatttagatcatcctcagccacctccatgacaatcgcc
cgctgtgtggatgtgttcaagggcttgtttgattacaggctgaagcgtgggaactcggtc
agcagccgcttggagtcaagctacggctatgtgcccgcctgcctcgtggcctgcttgcca
tccttcatcagtgacatccaggaagcgcacctctcggaggtcaacgccgtcaagttttgc
cccagctctaccatgctggccacggggggcaccgacaagctcatcaagctctggaacgtg
gtgggagggaggctggaaagcgtgcggaccctggaaggtgccaacggcagcatcaccagc
atcgagttcgaccccatgggctgccagatcctggcggcatcctacaacaaggcagtgcag
ctgtggaagatcgaggactgcaaatccagagagacgctgacgggccacactgacaaggtg
acggctgccaaattccgctccacgcgctaccaggcggtgaggggcagccgagaccggacc
gtgaaggagtgggacctgggcaaaggggcctgctgccgcaccatcgacgtgtgctcctac
tgcaacgacgtggtgtgctgggagaacatcatcgtcagcgggcaccacgacaagaagatc
cgcttctgggacagcaggggcccgcggtgcaccgaggtgatcccggtggaggggaaggtg
acctccctgcacatcagccaggaccagatgcacttgctgagctgctcccgtgacaacacg
ctcaaagtcatcgacctcaagatgaacaacgtccggcaggtcttcagcgctgacggcttc
aagtgtggatccgactggaccaaggcaatattcagccccgataagagctacatcctggcg
ggctcctcggacgggaccctctacgtgtggagcatggagaacgggaagttggtgacaagc
ctgccggggttgcacggagcctccgtgaatgccgtggcctggtccccctcaggccagcac
gtcgtgagcgtggaccaggggaagaaggtggtgctctggaaatag

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