Alligator sinensis (Chinese alligator): 102387778
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Entry
102387778 CDS
T02922
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102387778 (TRERF1)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102387778 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
Myb_DNA-bind_7
zf-met
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
102387778
NCBI-ProteinID:
XP_006028027
UniProt:
A0A1U7S9R0
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MGDQQLYKTNHTANSNDNLYYQHHQVNSLPALNHSYGTSIMDASQASPLSPQYPQDSRDS
IALTVGSKSLGSLDSSRPTSWTHSGAGNHVSVRNNLNSQNAMWSPLGQGESADGYQYPYS
PANEVRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMTQVLHAPSSVMDNVNDSALRQLL
SQKSSIEQQPATSTVQRYQQVPQQVHQSFASPQQKQQMQVMQHPQQLYYDYQQHLSQMQM
HSAVQPGQPHVQQLQSQQLLPQHLQHLQQSQYYLQQQPQQGQQRFSIQEMQQGQQLSRQQ
QQRQCPMQIAQYYQTQPAMQQLQPQQQMDLQLPYHRDPDPKTLHEAHQYSQDQSHPVQLI
QLGAVPQYCYQDPQQQYRHLYSQSLLQQQEQQQEDDTSQEKQYQSDNRSQALMNSHISLS
APEVIEDPTEQEINSVNNTLPHRTLLPPSGGHLNSKGAPQESPTAIWPQQMQLSDGRLQP
LSPEQSDQNRGLFPERANTKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPSFKQEESE
KPLQQQPPKEVDSLAPIVMPVSVPVKLLSPEPSTQPTTNSTTVKDKPANSVSDDEMPVLV
KMTYSPPCSPKVANPCSSSEVNRKPPPSASKLEENIKPLQDKKKYRHRPEPLFIPPPSFN
FPASYSGATLYQSQLRSPRILGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHG
ASHPQLPLTPLTPTPRVFLCRSNSIDGNNVPVTPGPGEQTVDIEPRINIGSRFQADIPDL
QDESLIEKDMHKATLVWKPWPELENKDFQQKVDTLLNMCCSSVLPGGGTNSEYALHSLFE
AKGDVMATLEMLLLKKQERTKCHPLANYHYAGSDKWTKPERKLFKDALSIYSKDFLFVQK
MVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLEKKRDECLTSGEEEVLEDEEEVEEDRKCV
KEEESEIQKSPEPPPIPLAPIDLPPLQSLSLSAASFICEMPNCGAVFSSRQALNGHARIH
GGTNPMTKTRCTVSVVKQKSGTQSGHGSVKSSPAHSTTSGETDPTTIFPCKECGKVFFKI
KSRNAHMKTHRQQEEQQRQKAQKAAVATEMAATIARTTGPVGHGMIPLDHMDLIKHVEDL
DDDVVQELGNVMEENEVMEADLLLDDEDADLLQDDAEL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaaaactaaccacactgccaacagcaatgataacttgtac
taccaacaccaccaggtaaactctctccctgctttaaaccacagctacggaacatcaata
atggatgcttctcaggcttcccccctctctccacagtatccccaggattcaagggacagt
atagctttgactgtaggttcaaaaagccttgggtcattggattcatcgcgaccaaccagt
tggacacattctggtgcaggaaaccatgtctcagtaaggaacaatttaaacagtcagaat
gcaatgtggagccctctagggcagggtgaatcagctgatggataccaatatccctactct
ccagctaatgaagttcgatcacagaaaatcacgagtggggttttacataaactagactcc
tttacgcaagtatttgctaaccaaaacttaagaattcaagtcaacaacatgactcaggtc
ttgcatgctccgtcttcagtgatggataatgtcaatgacagcgcattgagacaactgctg
tctcaaaagtctagcattgagcaacagcctgcaacttccactgtgcaaagataccaacaa
gtgccacagcaagtacatcagagttttgcaagcccacagcaaaagcaacaaatgcaagtc
atgcagcacccacagcagttgtattatgattaccagcaacacctctcccaaatgcagatg
cattctgcagttcagccaggccagccacatgtgcaacaattgcagtcccagcagctgtta
ccacaacatttacagcatttacagcagagccaatattacctgcaacagcaaccacagcaa
ggacagcagcggttttcaatacaagaaatgcagcaggggcagcaactaagtcggcagcag
cagcaaaggcagtgtccaatgcaaatagcacagtattatcaaacgcaacctgctatgcag
cagttgcagccacagcagcagatggacttgcagctgccttatcacagggatcctgaccca
aagactctgcatgaagcacaccagtattcccaggatcagtctcatcctgtacagcttata
cagttgggagcagtgcctcagtattgctaccaagatccacagcagcagtataggcatttg
tattcacagagcttactacaacaacaggagcagcaacaagaagacgacacaagtcaggaa
aagcagtatcaaagtgacaacaggtctcaagctctgatgaactcccatattagcctctcg
gcaccagaggtaatcgaggatcccacagagcaggaaattaattcagtcaataatactctt
cctcatcgaactctgttaccaccatcaggtggccatctaaatagcaaaggggctccgcaa
gaatctcccactgccatttggcctcagcagatgcaactgtcagatggcagactgcaacca
ctgtcccctgagcaaagtgaccagaacagaggattgtttcctgagagagccaatacaaag
aacaagctaacatgctcaatatgcttgaaggaatttaagagtttaccagccctaaatggt
cacatgaggtcacatgggggagtaagagcctctccgagctttaaacaggaggaaagcgag
aaaccactacagcagcaaccgcctaaagaggtggatagcctcgcgcccatcgtcatgcct
gtttctgtccctgtaaagcttctgtcgcctgagcccagcacgcagcccactaccaacagt
accacagtcaaagacaagcctgccaactctgtatcagatgatgagatgccagttctcgtg
aagatgacttactctccgccgtgcagtccaaaagtggccaatccctgctcatcttctgaa
gtcaacagaaagcctcctccaagtgcttcaaaattggaagaaaacatcaaacccctgcag
gacaagaaaaaatatcgacatagacctgaacctctcttcatacctcctccttctttcaac
ttccctgcatcctactcaggtgctacactctatcaaagtcaactacgctctccccgcatc
ctaggagaccatctgctagaccggacacatgagcttcctccttacactccacctcctatg
cttagcccagtacgacaaggatccggtctcttcagcagtgttatcacctcgtctcatggt
gcatctcacccccaattgccactcacgcctctgacacccactccgcgggtcttcctgtgt
cgatctaatagtattgatggaaacaatgttccagtgactccagggcctggagaacagact
gttgacatagaaccacgaatcaatattggttcacgattccaggctgatatccctgatcta
caagatgaatctttaatagagaaagacatgcacaaggcaactttagtttggaagccatgg
ccagaactggaaaataaagacttccaacaaaaagtggacaccctcttaaatatgtgttgt
tcaagtgtgttacctggtggaggaactaattcagagtatgctttgcactccctctttgag
gccaaaggagatgttatggctactctagagatgctccttttgaagaagcaagaaagaacg
aagtgtcatcctttggcaaattaccactatgctggatctgacaagtggacgaaacccgaa
agaaagctttttaaggatgcactgtccatttacagcaaagattttctttttgtacagaaa
atggttaagtctaagacagttgcacagtgtgtggaatactactatacttggaagaaaatc
atgcgtctgggacggaaacacagaacacgtttagaaaaaaagagagatgaatgcctgaca
agtggagaagaggaggttttagaggatgaggaagaggtggaagaagacagaaaatgtgta
aaagaagaggaaagtgaaatacagaaatcccctgaaccaccacctatcccacttgcaccc
atagacctgccaccccttcaaagtctctcactttctgcagcctcttttatctgtgaaatg
ccaaactgtggtgctgtgttcagctccagacaagcactaaatggccatgcccgtattcat
ggaggtaccaatccaatgacaaaaacaaggtgtacagtttcagtcgttaagcaaaaatct
gggacacagagtggacacggttcagttaaaagctcacctgcacacagcacaacaagtggt
gagacggacccaacaacaatttttccttgtaaagaatgtggcaaggtgtttttcaaaatc
aaaagtcgcaatgctcatatgaagactcacagacaacaggaagaacaacaaaggcaaaag
gctcaaaaagctgctgttgcaacagaaatggctgctactattgcaagaactactgggcca
gttggacatggtatgatccctctggatcatatggatttgattaaacatgtggaggacctt
gatgacgatgttgttcaggagttaggtaatgtcatggaagagaatgaagtcatggaagct
gacctcttgttggatgatgaagatgcagacctgctgcaggatgatgctgagctgtaa
DBGET
integrated database retrieval system
