KEGG   Alligator sinensis (Chinese alligator): 102387958
Entry
102387958         CDS       T02922                                 
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
  KO
K23195  transcriptional repressor CTCF
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asn03000]
    102387958 (CTCF)
   03036 Chromosome and associated proteins [BR:asn03036]
    102387958 (CTCF)
Transcription factors [BR:asn03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    102387958 (CTCF)
Chromosome and associated proteins [BR:asn03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    102387958 (CTCF)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_jaz zf-C2H2_REST Zf-C2H2_ZNF451_C zf-C2H2_ZN142 zf-C2H2_7th_ZNF462 zf-met zf-C2HE zf-C2H2_6 zf-C2H2_15 zf-WIZ
Other DBs
NCBI-GeneID: 102387958
NCBI-ProteinID: XP_006030295
UniProt: A0A1U7S702
LinkDB
Position
Unknown
AA seq 735 aa
MWTEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDVCHIPPNQADGGEVVQD
VSSGVQMVMMEQLDPTLLQMKTEVMEGTVPQETEATVDDTQIITLQVVNMEEQPINIGEL
QLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANG
EVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCD
AVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFR
QKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHSDNCSGPDGAEGENGGEPNK
KGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEEEEETAVEIEAEPEVEQVAPAPPPAKKR
RGRPPGKANQPKQPQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVGEEEEAQPAVVEAP
NGDLTPEMILSMMDR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgtggacagaggaaggtgaaatggaaggcgaggcagttgaggctattgtggaggaatct
gaaactttcattaagggaaaagaaagaaaaacctatcaaagacgccgtgaaggtggacag
gaggaggatgtttgtcatatcccacctaaccaagcagatgggggtgaagtagtgcaggat
gttagtagtggtgtgcagatggtgatgatggaacagctggatccaacacttcttcaaatg
aagactgaagtaatggaaggcactgtgcctcaggaaacggaggctacagtggatgacaca
cagataataacacttcaggttgttaatatggaagaacagcctataaacattggtgagctt
cagcttgtccaagtacctgttccagtgactgtaccagttgccaccacttctgtggaagaa
cttcagggagcgtatgaaaatgaggtttcaaaaggaggcctacaagagggagagcctatg
atctgtcacacgctccctttaccagaaggtttccaagtagtgaaagtaggtgcaaatggt
gaggtggaaacactggagcaaggagaacttcagccacaggaagatcctaattggcagaaa
gatccagactatcagccaccagccaaaaaaacaaagaaaaccaaaaagagcaagcttcgt
tatactgaggaaggcaaagatgtggatgtgtctgtgtatgattttgaagaggagcagcaa
gagggtttgctatctgaggtcaatgcagaaaaggtggtgggcaacatgaagccccctaaa
ccaacaaaaataaaaaagaaaggtgtaaaaaagacattccagtgcgagctgtgcagttat
acctgtccacgtcgttccaacttggaccggcacatgaaaagccacactgatgaaaggcca
cataagtgccatctctgtggcagagctttccggacagtcacgttgctgaggaaccacctc
aacactcacacaggtactcgtcctcacaagtgcccagactgcgacatggcctttgtgact
agtggagagttggttcggcatcgccgttacaaacacactcatgagaaaccattcaaatgt
tcaatgtgtgactatgctagtgtggaggtcagcaagttgaaacgccacattcgctctcat
actggagagcgtccattccagtgtagcttgtgcagctatgccagcagagacacttacaaa
ctgaagaggcacatgagaacccactctggagagaagccatatgaatgttacatctgtcat
gctcgctttacccagagtggcaccatgaagatgcacattttgcaaaagcacacggagaat
gtggcaaaatttcattgcccccactgtgatactgtcatagcaagaaagagtgacttgggt
gtccatttgcgaaagcagcattcctacattgagcagggcaagaaatgtcgctactgtgac
gctgtgttccatgagcgatatgctctcatccagcatcaaaagtctcacaagaatgagaaa
cgtttcaagtgtgaccagtgtgattatgcatgcagacaggagcggcacatgatcatgcac
aaacgtacccatactggagaaaagccttatgcctgtagccattgtgataaaaccttccgt
cagaaacagctccttgatatgcacttcaaacgttaccatgaccccaactttgtccctgct
gcctttgtctgttcgaagtgtggtaaaacattcactcgcaggaacaccatggctagacat
tctgataactgttctggcccagatggtgcagaaggagagaatggaggggagccgaataag
aagggtaaacgtggaagaaaaagaaagatgcgatctaagaaggaagattcatctgacagt
gaagaaaatgctgagccagatctggatgacaatgaagaagaggaggagacggcagtagaa
attgaggctgaaccagaagtggagcaagtggcccctgcaccgcctcctgctaagaaacga
agaggaaggccaccaggcaaagccaaccaaccaaagcagccccagcctacagcaatcatt
caggttgaagaccagaacactggtgcaattgaaaacattatagttgaagtaaagaaagaa
cctgatgcagaaacagtaggagaagaggaggaagctcagcctgctgtagtggaagctccc
aatggagacctcactcccgagatgattctcagcatgatggaccggtga

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