KEGG   Alligator sinensis (Chinese alligator): 102387972
Entry
102387972         CDS       T02922                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102387972 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asn03400]
    102387972 (XRCC1)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102387972 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 102387972
NCBI-ProteinID: XP_014380578
UniProt: A0A1U8DH36 A0A1U8DSA5
LinkDB
Position
Unknown
AA seq 681 aa
MRTGPESAAASAQSTTKDPGNHRVPKRGPVAGFVSGLGRSFGSGAGGGGADWTGRCRRSR
GGTGGRRLDGTMPEIAVRHVVSASSADPTHCAENLLRPDTYRKWKAAQPGEKQISGILQF
EKEEQIHGIDIGNEGSAFVEVLAGSSASPSEQDYEVLLVTSSFMSPSESRSGSNLHRVRL
FGPDKLVRAAAERRWDRVKIICSQPYSKTLAYGLSFVRFHSPPDKDSQSKVASPKLTKFG
QFKVKDEDGISGSLRPGALFFSRASKAPPPDSAPQAEAPGPSYAAATLQASAAAAASPEK
PSTKASPKDPAPAKRRFELGKEKAAPSAAQKPEPKAPKKPRAVSLGAVAPPTPSPRKPQK
EGTGPGQGVGPEAFERLLQDVVLVLSGFQNPFRAELRDQALAMGARYRPDWTPDSTHLIC
AFANTPKYSQVKRLGGIILRKEWVLDCHRTRRRLPVKRYLMDGAASSSSEEGSENEASPG
QLPSASAPQGAEDLRLQRPDAPGDKAEPSTSQTCPERDGRLGLSDGSEDESGDTDDELRR
VEEEHRKKQQEGRDPGANPNDDPYGGSTDENTEDEGQSPSAQPIPELPDFFVGKGFFLYG
EFPAHERRLLTRYITAFNGELEDYMNDRVNYVVTAQDWDQAFEEALHAHAGLAFVRPRWI
FTCGRRRRLVPYQPFTVGPCA
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcgcacgggcccggaatcggccgccgcgtctgcgcagagcaccacgaaggacccgggc
aaccatagagttcccaagagaggccccgtagcgggcttcgtttccgggctgggccggagt
tttggttccggggcgggaggcggaggcgccgactggacgggacgatgccggaggtcgcgg
gggggcacgggggggcgccgactggacgggacgatgccggagatcgcggtgcggcacgtg
gtgtccgccagcagcgccgacccgacccactgcgctgagaacctgctccgacccgacacc
taccgcaagtggaaggcggcacagcccggagagaagcagatctcgggcattctccaattt
gagaaggaggagcagatccatggcattgacatcgggaatgagggctcggccttcgtggag
gtgctagctggcagctcggcctcccccagcgagcaggactatgaggtgctcctggtgacc
tcgtccttcatgtccccgagcgagagccgcagcgggtccaacctgcaccgcgtgcggctc
tttgggcctgacaagctggtgcgggcagcagccgagcggcgctgggaccgggtcaagatc
atttgcagccagccctacagcaagaccctggcatacggcctgtccttcgtgaggttccac
tcgccaccggacaaggacagccaatcgaaagtggcctccccgaagctgaccaaatttggc
cagttcaaggtgaaggacgaggatggcatctctgggtcccttaggccaggggccttgttc
ttcagccgtgccagcaaggccccgccccctgacagcgccccccaagccgaagcccctgga
cccagctatgccgcagccacgctccaggccagtgccgctgctgctgcctctcccgagaaa
cccagcaccaaggcctcacccaaggatccagcccctgccaagaggaggttcgagctgggc
aaggagaaagcggctcccagtgccgcccagaaaccagagcccaaggcccccaagaaaccc
agggctgtctccctgggtgctgtggccccccccacaccatcgccccggaaaccacagaag
gaggggacagggccggggcagggagtgggaccagaggcctttgagcggctgctgcaggac
gtggtgctggtgctaagcgggttccagaaccccttccgcgccgagctgcgggaccaggcg
ctggccatgggtgcccggtaccggcctgactggacccccgacagcacccacctcatctgt
gccttcgccaacactcccaagtacagccaagtgaagcgcctggggggcatcatcctgcgc
aaggagtgggtgctggactgccaccgcacccggcgccgcctccccgtcaagaggtacctg
atggacggggctgcatcatccagcagtgaggaagggagtgaaaatgaggcctcccctggc
cagctcccctctgcctctgccccacagggagctgaggacctccggctacagcggccggat
gcccctggggacaaagcagagcccagcacctctcagacctgccctgagcgcgatgggcgc
ctaggtttgagtgacggcagcgaggacgaatcaggggacacagatgatgagctgcgcagg
gtggaggaggagcaccgcaagaagcagcaggagggtcgggaccctggcgccaaccccaat
gatgacccctacggtggctccactgacgagaacacagaggatgaggggcagagccccagt
gcccagccaatcccggagctgcctgacttctttgtaggcaagggcttcttcctctacggc
gagttcccggcccacgagcgccgcctgctgacgcgctacatcacagccttcaatggggag
ctggaggactacatgaacgaccgtgtcaactatgttgtcaccgcacaggattgggaccag
gcctttgaggaggcgctgcacgcccatgccggcctggccttcgtgcgcccacgctggatc
ttcacctgcggccggcgccgccgcctggtcccataccagccattcactgtggggccctgc
gcctag

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