Alligator sinensis (Chinese alligator): 102388051
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Entry
102388051 CDS
T02922
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102388051 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asn03400
]
102388051 (MSH6)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102388051 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
WPP
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
102388051
NCBI-ProteinID:
XP_006014788
UniProt:
A0A1U7RB26
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MFYSSKPEIKRAMILADDAMLKDARKRLELAVCNEPSDTEDEEMEVSESASGNSEDYESE
EEVKKNKQTTSQRRSAGKSKKRRVLDSDTDNEGSDVEFKPDAKNEASSDEDSSGVDEGES
GDSEPDTEMDVESPVKVAPKRKRLAINRPAKRRSLENDLPEAPKRVVTMSSETKSKLTSF
AAPESFDSQPNAGSGGVGSSVEWEHEKFEWLREGKRRDGCRRRQGDPSYDPCTLYVPEDH
LNKCTPGMRKWWQLKSQNFDSVIFYKVGKFYELYHMDAVTAVNELGLIFMKGTWAHSGFP
EIAFGRFSDVLVQKGYKVVRVEQTETPEMMEARCKSLAHPTKFDKVVRREICRVITKGTQ
TYSVLDGDPSENHNRYLLCIKEKVEDSSGHLRVYGVCFVDTSVGKFYVGQFPDDRHCSRF
RTLVSHYTPVQILFEKGNLSSDTYKILRGSLSSCMQEGLISGSQFWNASKTLKTLLEEGY
FKDKEKSDDDCTLPPVIKSMTSESDSLGLTPGDNSELALSALGGCVFYLNKCLIDQELLS
LANFEEYIPVDIDLTKATGSSSFFAKTSQRMVLDGVTLMNLEILQNGTTGTMEGTLLERM
DTCYTPFGKRLLKQWICAPLCNPYAINDRLDAVEDLLAVPTKMSEVSEQLKKLPDLERLL
SKIHSIGSPLKSESHPDSRAVFYEETKYSKKKIADFLSALEGFKAMNEIIDMMEETTDDF
KSEILKQVVTRKSKTPEGRFPDLHTELKRWDTAFDHNQARKTGVITPKSGFDPDYDKALQ
DIKDVEEDLREYLNKQRKLLGFKTMLYWGAGKNRYQIEIPESVVTRGLPEEYELKSTRKG
YKRYWTKEIETMLADMMNAEERRDAAVKDCMRRLFYNFDKNNKDWQTAVDCFAVLDVLLC
FANYSRDGEGPMCRPVILLPENNVPPFLELKGSCHPCITNTFFGDDFIPNNIVIGCKDED
EESTSEAYCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYLPAEACRLTPVDRVFTRLGAS
DRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAENVK
CRTLFSTHYHSLVEDHSHNDAVRLGHMACMVENDSEDPSQETITFLYKFTKGACPKSYGF
NAARLANIPEEIIQNGHRKAREFEKMTLSLRMFRYLCLMAEDATEDKSAVQKLMRLINHL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttacagttcaaagcctgaaattaaaagagcaatgatcttagcagacgatgctatg
cttaaagatgcaagaaagcggcttgagcttgctgtgtgcaatgaaccttcagacacggaa
gatgaggaaatggaggtgagtgaaagtgcatcaggcaacagtgaggattacgagagcgaa
gaggaagtgaaaaaaaataagcaaacaactagccagagaagaagtgctggaaaatccaag
aagagaagagtgttggactctgacactgataatgaaggttcagatgtggagtttaagcca
gatgctaaaaatgaagcaagcagcgatgaagacagcagtggagtggatgaaggtgaatct
ggagactctgagccagacacagagatggatgtagaaagtcccgttaaagttgcccctaaa
cgaaagagactagccataaacagaccagctaaaaggaggagcttggagaatgaccttccc
gaggcacccaaaagagtggtaactatgtcttcagaaaccaagtccaagctgacatctttt
gcagcacctgaaagcttcgactctcagccaaacgcgggcagcggaggagttggcagttct
gtggaatgggagcacgagaagtttgaatggctccgtgaaggaaaaaggagagatggatgc
aggaggcggcagggtgaccccagttatgacccgtgcaccctctatgtgccggaggaccac
ctgaacaaatgtacccctggaatgcgaaagtggtggcagctcaagagtcagaactttgac
tctgtgattttctacaaagttggcaagttctacgagttgtatcacatggatgctgtaact
gcagtgaacgagcttggactgatatttatgaaaggtacatgggcccattcagggttccca
gaaattgcgtttggcaggttctctgatgttctagttcagaaggggtacaaagtagtccgg
gttgagcagacagagacgcctgaaatgatggaggcacgctgcaaatccctggctcaccca
acaaagtttgacaaggttgtacgaagagaaatatgccgggtaattactaaagggacgcag
acttacagtgttctggatggtgatccatctgaaaatcataacagataccttctgtgtata
aaagagaaagttgaagactcttctggtcatctacgtgtatatggtgtctgttttgttgac
acttctgttggcaaattttatgttgggcagtttccagatgaccgccactgttcaaggttc
agaactttggtgtcacattatactcctgtgcagatcctgtttgagaagggaaacctttct
tcagacacgtacaaaatactgagaggctcactgtcttcttgcatgcaagaaggtttgatc
tcaggctcccaattctggaatgcctctaaaacactaaaaactctgcttgaggagggatac
ttcaaggataaggaaaagtctgatgatgactgtactctgcctcctgtgatcaaatccatg
acttcagaaagcgactctctgggacttactcctggtgacaacagtgaattggctctgtcg
gctcttggtggctgtgtcttctaccttaacaagtgccttattgatcaggagctcttatct
ctggcaaactttgaggaatacattcctgtggacattgatctgaccaaagctactggatca
agtagtttctttgcaaaaactagtcagaggatggtattggatggggtgactctaatgaac
ttggaaatcctccagaatggaactactggcaccatggaaggaacgttactggaaaggatg
gacacttgttatacaccctttggaaagcgactcctgaaacagtggatctgtgcgccactc
tgtaatccttatgctatcaatgatcgtttagatgctgttgaagaccttctggcagtgcct
actaaaatgtccgaagttagtgaacaactaaagaaactcccagacctggaaaggctgctg
agtaaaattcatagtattggatctccactgaaaagtgagagtcatccggacagtcgggcc
gtcttttatgaggaaaccaagtacagcaaaaaaaaaattgctgactttctgtctgcactg
gaagggtttaaggcaatgaatgagatcatagacatgatggaagaaaccactgatgatttc
aaatccgaaatacttaaacaagtagtgacccgcaagtctaaaactccagagggccgcttt
ccagacctccacacagagcttaaaagatgggacactgcttttgaccataatcaggctcga
aaaactggggtgatcacaccaaagtctgggtttgaccctgattatgataaggccttgcag
gatataaaagacgtggaagaggatcttcgggaatatttgaataagcagcgcaagctactt
ggattcaaaactatgctgtactggggggcaggcaagaatcgatatcaaatagaaattcca
gaaagcgtagtgacacgtggcttgcctgaagagtatgaattgaagtccaccagaaagggt
tacaaacgctactggaccaaggagatcgagacgatgctggctgacatgatgaatgctgag
gagcggagagatgcggctgtgaaagattgcatgaggcgactcttctacaactttgataaa
aacaacaaagactggcaaacagcagtggactgttttgctgtcctagatgtcctgctgtgc
tttgctaattatagtcgagatggtgaaggaccaatgtgccgacctgtgattctgctgcca
gagaacaatgttccacccttcttggagcttaaaggttcctgccatccatgcattacaaac
actttttttggggatgattttattcccaataatattgtgataggctgcaaggatgaagat
gaagagagcactagtgaagcctactgtgttctagtaactggcccaaatatgggtggcaaa
tctacactcatgagacaggctggcctcctggtaataatggctcagttgggatgttactta
ccagccgaagcttgcaggcttactcctgttgacagagtgtttacacgactaggtgcctcg
gacagaattatgtcaggagaaagcaccttttttgttgagctgagcgagacttccagcata
ctccagcatgcaacagagcattcccttgtgcttgtggatgaactaggtagaggcacagct
acttttgatggaacagcaatagcaagtgcagtcgttaaagaacttgcagaaaatgtaaag
tgccgcacattgttttcaacacactaccattcattagtagaagaccattcacacaacgat
gctgtgcggctaggacacatggcatgcatggttgaaaatgacagtgaagatccaagccag
gaaactattacatttctgtataaattcactaagggagcttgtcctaaaagctatggtttt
aatgcagcaaggcttgctaacattccagaggaaattattcagaatggtcacagaaaagca
agagagtttgaaaagatgacgctttcacttagaatgtttaggtacctttgtttgatggca
gaggatgcaacagaagataaaagtgctgttcagaaactgatgagactgatcaatcatctt
taa
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