Alligator sinensis (Chinese alligator): 102388052
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Entry
102388052 CDS
T02922
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102388052 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asn04147
]
102388052 (COPA)
Membrane trafficking [BR:
asn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102388052 (COPA)
Exosome [BR:
asn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102388052 (COPA)
Exosomal proteins of bladder cancer cells
102388052 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102388052
NCBI-ProteinID:
XP_014381401
UniProt:
A0A1U8DM61
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MTGSSLLPLLSLSPEIALNWKLDPYVFLSLSVLGLSFHPKRPWILTSLHNGVIQLWDYRM
CTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF
FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR
VWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLI
VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK
RTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNVLYYVKDRF
LRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDA
DSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAG
TGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLES
LCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYC
LDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALH
FVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNF
DRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYL
TAATHGLDEEAESLKETFDPEKETIPDIDPDAQLLQPPAPVMPLDTNWPLLTVSKGFFEG
TIASKGKGGAMAADIDIDTVGTEGWGEDAELQLDEDGFVDAADGFGDEAVGKGQEEGGGW
EVEEDLDLPPELDVPVGPAGGAEDGFFVPPTKGTSPAQVWCNNSQLPVDHVLAGSFETAM
RLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPHRNWKEATLKNAVPAVG
LKLNDLIQRLQLCYQLTTSGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREY
IVGLSMEIERKKLPKETLEQQKRICETAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKT
AATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGK
PVEKCPLSGACYYPEYQGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgactggttcttccctgcttccactgctatctttgtctccagagattgcacttaactgg
aaacttgacccctatgtatttctttctctgtctgttttagggctcagctttcacccgaag
aggccctggatcctaacaagtttgcacaatggagtgatccagttgtgggattatcggatg
tgcaccctcattgacaaatttgatgagcacgatggacctgtccgtggtattgatttccac
aaacagcaacctctctttgtctctggaggtgatgactacaaaatcaaggtctggaattat
aaactacgccgctgccttttcaccctgctgggacacctggattacattcgtaccaccttc
ttccaccatgaatacccctggattctgagtgcgtcggatgatcaaaccatccgggtttgg
aactggcaatccagaacctgcgtatgcgtgctgacaggacacaaccactatgtgatgtgt
gcccagttccacccttcggaagacctggtagtgtcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggagtcggat
gtccggggaataactggcgtggatttgtttgggaccacggatgcagttgtgaagcatgtt
cttgagggacatgaccgcggggtgaactgggctgctttccaccccaccatgcctctcatt
gtgtctggggctgacgatcggcaggtgaagatctggcggatgaatgaatcaaaggcctgg
gaggtcgacacttgccggggacattacaacaatgtgtcatgtgcagtctttcacccgcgg
caggaactgatccttagcaattcggaagataagagcattcgtgtctgggatatgtcgaag
cgcactggtgtccagaccttccgccgagatcatgatcgcttctgggttttggctgctcac
cccaacctcaacctctttgctgcaggccatgatggtggcatgattgtgttcaaactggag
cgtgagcggcctgcctatgctgtgcatgggaacgtgctgtattatgtgaaggaccggttc
ctccgtcagctcgacttcaacagctccaaggatgttgctgtcatgcagctgcgaagcggt
tccaagttcccggtgttcaacatgtcatacaacccagcggagaatgctgtcctgctctgc
acgagagccagcaacctggagaacagcacctatgacctctacaccatccccaaggatgca
gactcgcagaaccctgacgcccctgaagggaagcgctcctccgggctgacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcactcgatcctaatcaagaacctg
aagaacgagatcaccaagaaggtgcaggtgccaaactgcgacgagattttctatgctggc
actgggaacctgctgctaagggatgctgactccatcaccctgttcgacgtgcagcagaag
cgaactttagcctcagtgaagatctccaaggtgaagtatgttatctggtcagctgacatg
tcccatgtggctctgctggctaagcatgccatcatgatctgcaacaggaagctggagtcc
ctgtgtaacattcacgaaaatatccgggtcaagagcggtgcctgggatgagagcggagtc
ttcatctataccaccagcaaccacatcaaatacgctgttaccactggggaccatggaatc
atccgcaccttggacctgccgatctatgtcacccgcgtgaagggaaacaacgtgtactgc
ttggacagggagtgtcggcccagggtcctgaccattgaccccactgagttcaagttcaag
ctggccctgatcaacaggaagtatgatgaggtgttgcacatggtgaggaatgccaagctg
gtgggccagtccatcattgcctacctgcagaagaagggctaccctgaggtggcgttgcat
tttgtcaaggatgaaaagacccgcttcagcctggccctggagtgtggcaacattgagatt
gccctggaagcagccaaggctctggatgacaagaactgctgggagaagctgggcgaggta
gccttgctgcaggggaaccatcagatcgtggaaatgtgctaccagcgcaccaaaaatttc
gaccggctctccttcctctatctcatcacaggcaacctggagaagctccggaagatgatg
aaaattgctgagatccgtaaggacatgagtggccactaccagaatgccctgtacctcgga
gacgtggcagagagagtgaggatcctgaagaactgtgggcagaagtccctggcctacctc
acagctgccacccatggcttggacgaggaagctgagagcctgaaggagacgtttgacccc
gagaaggaaacgatcccagatattgaccccgacgcgcagctgctccagcctcctgctccc
gtcatgcctctagacacaaactggccactgcttactgtctccaaaggattctttgaagga
acaatcgcaagcaaaggcaaaggaggtgcaatggctgctgatatcgacattgacacagtt
ggcacggagggctggggggaggatgccgagctgcagctggatgaagatggctttgtggat
gctgcggatggctttggagatgaagccgtcgggaaagggcaggaggaaggaggtggatgg
gaagttgaagaggatttggaccttccccccgaattggacgtccctgttgggccagcagga
ggagcagaggacgggttctttgtgccacccaccaagggcaccagtccggcccaggtctgg
tgcaacaactcacagctgcctgttgatcatgtcctggctggctcatttgagacggccatg
aggctccttcacgaccaggtgggagtgactaatttcggcccctacaagcaactgttcctg
cagacttatgcccggggccgcaccacctaccaagccctgccttgcctcccctccatgtat
ggatacccgcatcgcaactggaaggaagctaccctgaagaacgcagtcccggcagttggc
ctgaagctgaatgacctgatccagcgcctgcagctctgctaccagctcaccacctccggc
aaattcgaggaggcagtggagaagttccggtccatcctgctgagcgtgccgttgcttgtg
gtggacaacaagcaagagattgccgaggcccagcagctgattgccatctgccgggagtac
atcgtggggctctccatggagattgagaggaagaagctccccaaggagaccttggagcag
cagaagcgcatctgcgagaccgccgcctacttcacccactccaacctgcagcctgtacac
atgatcctggtgctccgcactgctctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgcgcgccgcctcctggagctgggacccaagcccgaggtggcccagcag
actcgcaagatcctgtctgcctgtgagaagaaccccaccgacacctaccagctcaactat
gacatgcacaaccccttcgacatctgcgctgcctcctaccggcccatctaccgtggcaag
cccgtggagaagtgcccgctcagcggggcctgctactaccctgagtaccagggccagatc
tgccgtgtcaccacggtcacagagatcggcaaagatgtcatcgggctgcgcatcagtccc
ctgcagttccgctga
DBGET
integrated database retrieval system
