Alligator sinensis (Chinese alligator): 102388474
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Entry
102388474 CDS
T02922
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X2
KO
K13167
SR-related and CTD-associated factor 4
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102388474 (SCAF4)
03041 Spliceosome [BR:
asn03041
]
102388474 (SCAF4)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102388474 (SCAF4)
Spliceosome [BR:
asn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102388474 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102388474
NCBI-ProteinID:
XP_006035753
UniProt:
A0A1U7S6N8
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSSTAPVAENTSNNEGSPPPPAKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPPKPQSPVIDNTVMAHVQAITAQLKTTATQPPEQKAAFPPPEQKT
SFDKLLDRFDYDDEPEAVDDSKKEDTAPSPSISQPAFGFPGEGMPPPVYPQLPNIDPFQQ
RMMGMQQDPIRHQVPLPPNGQMPSFGLLPTPQFPPMAQPVIPPTPPVQQTFQTPFPVQSE
PPHMQKTHQQEMEVEQPPVQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS
RSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKPETVSVCSTTLWVGQLDKRTTQQ
DVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALN
KGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVA
QNGGAETTHTEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAP
MGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPVSVPHTPPVN
IPNSTATGVSEDTTKDASVGNPIPTVVSGSRGNSETSDSSKMYATVPPPVAPTNVPAPVS
QPMPAPVSQPMPLLGTQGVAPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGIPPPPLQRF
PLMPPRHMPPHMLHRGPPPGPGGFGMPPPHGMKNPFPPPGPFVRPGGGMSGSGGSGGPED
NRDGRQFRNDRQTFGSNRDQERYGRRSFGNRVENDRERYGNRNDDRDHERLGNRERREWG
RRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKPELTDRADGDNNHE
SHSGKVENADIVSELTTGASEPTGVKPNEVLTSEATSSVEQAAKDIGSVVEAPR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaaaccacctatttcccgagcaaagatgattctcattactaaagctgccatt
aaagctattaagctctacaagcatgtagttcagattgtagagaaatttatcaaaaagtgc
aaaccagaatacaaagttcctggattgtacgttattgactctattgttcgtcagtctcgt
caccagtttggaacagataaggatgtttttgggccaagattctctaaaaatataaccgcc
acattccagtatttatacctctgtccatctgaagacaagagtaagatagttcgtgttctg
aacctttggcagaaaaatggagtgtttaaaatagagatcattcagcctcttctggatatg
gcagcaggaactagtagtacagccccagtggcagaaaatacctctaataatgaaggttca
ccaccccctccagcaaaggttccctctgagccacctcaggttactgctaattcagtacct
actgtgccacagttgcccagttctgatgcctttgctgctgtagcccagttgtttcagaca
actcaaggacagcagcttcagcagattcttcagacttttcagcaacctccaaaaccccag
tctccagtcatagacaatactgtcatggcacatgttcaggctattactgctcagttgaaa
actacagcaacgcaaccaccagagcaaaaagctgcttttcccccacctgagcaaaaaaca
tcttttgataagctgctagatcgttttgactatgacgatgaaccggaagcagtggatgac
tcaaaaaaagaagatacagcaccttctccttccatttcccaaccagcctttggatttcca
ggagaaggtatgccaccaccagtatatccacaactcccaaatatagatccatttcaacag
cgaatgatgggaatgcaacaggatccaatacgccaccaggttccacttcctcccaatgga
caaatgccaagttttggacttctacctacaccacagtttcctcctatggctcagcctgta
atacccccaacaccacctgtgcagcaaacttttcagactccttttccagtacaaagcgag
ccaccacacatgcagaaaacacatcagcaggaaatggaagtggaacagccccctgttcaa
gaaggaaagcgacatgtttctgataacagaaagtcaagatctagatctgcttcaagatcg
cccaagagaagacgatcaagatctggatctcggtctcgacggtcacgtcatcgtcgttct
cgctcccgatctcgggataggcgccggcactctcctaagtctcgatctcaggagagacgt
gaacgagagagggagagagaacgcaggtcaaaaggccttcctcaaatcaagccagaaact
gttagtgtttgtagtactacactttgggtaggacaactggacaaaagaacaactcaacaa
gatgttggaagtcttttggaggagtttggcccaattgaatctataaacatgataccacct
agaggatgtgcctatattgtaatggttcacagacaagatgcttatcgtgccctacaaaaa
ttgagccgaggcaacttcaaagtcaatcagaaatctataaagatcgcatgggctttaaat
aaaggaattaaaccagattataaacagtattgggatgtagaattaggtgttacctatatt
ccctgggacaaagttaagcctgaagatcttgaaagtttctgtgaaggaggaatgttggat
aatgaaacgcttagtccagagtggaaaggaattcccaagaaatctgagaatgaagttgct
caaaatggaggtgcagaaaccacacatactgagccagtgtcaccaatacctaaagcttta
cctgttccaattcctgttcccatgcctgcaccaataaccgtgcctcctccacaggttccg
ccacacccatccggccctcctgtagttggtgcgctccagccacctgctttcactgctcca
atgggaatcccacctcctggatttgcccctggggttcctcccccaccaccacctccattt
ttacgacctggattcaacccaatgcatttgccaccaggttttcttcctcctgggccacca
ccacctataacccctccagtttctgttcctgtatctgttcctcacactccgcctgtaaac
atcccaaactctactgcgactggtgtaagtgaagacactacaaaggatgcatctgttgga
aatcctattccaacagtggtttctggatctagaggaaattctgaaactagtgacagttcc
aaaatgtatgcaactgttcctccaccagtagcaccgactaatgtacctgctcctgtcagc
caacctatgcctgctcctgtcagccaacctatgccacttctgggtactcaaggagttgca
ccaccacctgctcccgtggttggattacagaccccctctactggactccttggggcacgg
cctggtttaataccactccagcgacctcctggaataccaccaccacctctgcaacgcttt
cccttgatgccaccacggcatatgcctccccatatgttacacagaggtccaccccctggg
ccagggggctttggcatgcctccccctcatggaatgaaaaacccgtttccaccacctggc
ccctttgttaggccgggcggagggatgtcaggaagtggaggatcaggtggacctgaggat
aatagagatggaaggcagtttaggaatgataggcagacattcggttctaatagagaccag
gaaaggtatggaaggaggtcttttggaaatcgggtagaaaatgatcgtgagcgctatggt
aaccgcaatgatgacagggatcatgagcgacttggtaatcgtgaaaggagagaatgggga
agaagaagccctgaacgcgatagacacagagacttagaagacagaaatcgacggtccagt
ggacaccgagacagagagagagattctagagatagggaatctcgtagagacaaggaagaa
aatcgaggaaaggagaaacctgagctgacagacagggcagatggtgacaacaaccatgaa
tctcacagtggcaaagtggaaaatgcagacattgtttcagaacttactacaggagcgtct
gaacccacaggtgtaaaacctaatgaagtgttaacatctgaggctacctcatctgttgaa
caagctgcaaaggatattggctcagttgtagaggctcctcgttag
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integrated database retrieval system
