Alligator sinensis (Chinese alligator): 102388878
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Entry
102388878 CDS
T02922
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03430
Mismatch repair
asn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102388878 (PMS2)
03460 Fanconi anemia pathway
102388878 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asn03400
]
102388878 (PMS2)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102388878 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
102388878
NCBI-ProteinID:
XP_014379053
UniProt:
A0A1U8DCS3
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All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MEPAACPPPAAAIRALDRPSVHRICSGQVVLSVGTAVKELLENSLDAGATHVDIKLKDYG
AELIEVSDNGCGVEEENFEGLTLKHYTSKIQDFCDLIHVETFGFRGEALSSLCALSDVTI
FTCHKSAKVGTRLVFDHNGKITQKTPYPRQQGTTVSIQQLFYTLPVRHKELQRNIKKEYA
KMVQILQAYCIISTGVRITCTNQVGQGKKNTVVCTPGSSSLKENIGAVFGQKQLQSLISF
AQLLPSEAVCEEYSLSSVDMPHSLYTITGFISHCDHGVGRSTTERQFFFINQRPCDPTKV
SKLVNEVYHMYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKVLLAILKTSLMDM
FGSDVNKLNINQKLLDIAGNLKKILPEETEKPKTETLLGSASQSPSRELKRGMTITKLRE
SFSLHQMTESSFGSPKNVKQQHSSPRHRHLLSDLSTSSPVNSQKSDPNKETDCWSAVDSN
THTVIGTNLKKLENDTDSGCGSTSVESNVSFSTPEVGSCLSSESTDASPEKEFHISDENL
QSGCLETVTCAEESLECDVQLSGNVHKLNQVGDQKERREFLPNSFPNMKRFKSKKEDLKG
TTCPELKNAQNSAPGLHADVLIEVQKKTVTLEFSMNTLAERVRKLTQLQQKNTEMLNYRR
FKAKISPGENKAAEDELRKEIRKEMFAKMEIIGQFNLGFIIAKLKSDLFIIDQHATDEKY
NFEMLQQHTILQGQKLIAPQNLNLTAVNETILIENLEIFRKNGFDFVIDENAPVTQRVKL
ISLPTSKNWTFGPQDIEELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVNEM
KKLITHMGEIEHPWNCPHGRPTMRHIASLDLISPE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcggcctgcccgcctcccgccgcggccatccgggccctggaccgcccgtcc
gtgcaccgcatctgctcggggcaggtcgtgctgagcgtcggcaccgccgtgaaggagctg
ctggagaacagcctggacgccggcgccacgcacgtcgatataaagcttaaagattacgga
gcagagcttatagaagtttcagataatggttgtggtgtagaagaagaaaactttgagggc
ttgactttgaagcattatacttctaagatacaagatttctgtgatctaatacatgttgaa
acatttggatttcgaggtgaagctctgagttcactgtgtgcattaagtgatgttaccatt
tttacttgtcacaagtctgcaaaagttggaactcgtctggtgtttgatcacaatgggaaa
attactcagaaaactccttacccacgacagcaaggaacaactgttagcatacagcagttg
ttttatactctgccagtgcggcataaagaacttcaaagaaacattaagaaggagtatgca
aaaatggtccagatactgcaagcatattgcatcatttcaacaggagttcgaattacctgt
accaatcaagttggtcaagggaaaaaaaacaccgtggtatgcacccctgggagctcaagt
ctgaaggaaaacataggagcagtatttgggcaaaaacagttgcaaagccttatttccttt
gctcagctacttcctagtgaagctgtttgtgaagaatatagcctcagctctgttgacatg
ccacacagtctgtataccattacaggcttcatttcccattgtgatcatggcgttggaagg
agtacaacagagagacagttctttttcatcaatcagagaccatgtgatccaacaaaggtt
tccaagcttgttaatgaagtttaccacatgtacaataaacaccaatatccatttattgtt
ctaaatatttgtgtagattctgaatgtgttgacatcaatgtaacacctgataagaggcag
attttactacaggaggagaaagttttgttagcaattttaaagacttctctgatggatatg
tttggtagtgatgttaataaacttaacatcaatcaaaagctgctggatattgcaggtaac
ttgaaaaaaatacttccagaagaaacagaaaagcctaaaacagaaacattgcttggttct
gcatctcaaagtccaagcagggaattaaaaagagggatgactattaccaaattaagggag
tcgttctcactccatcaaatgacagagagcagctttgggagccctaaaaatgtgaaacaa
caacacagctcccctaggcacagacatctcttgtcagatctttccacttcaagtcctgta
aacagtcaaaaatctgaccccaacaaggagactgattgctggagtgcagtggactcaaac
acacatacagttattggcacaaatttgaagaaattggaaaatgacactgattctggatgt
ggtagtacttctgtagaatcaaatgttagctttagcactccagaagtgggtagctgcctc
agcagtgaaagtacagatgcctctcctgaaaaagaattccatatatcagatgaaaatctc
caaagtgggtgtcttgaaactgtaacctgtgctgaggaatcattggaatgtgatgtccag
ctttccggaaatgtacataaattgaaccaagtgggcgatcagaaagaacggagagagttc
cttccaaattctttcccaaatatgaagcgttttaaaagtaaaaaagaggacctaaaggga
accacctgtccagaactaaagaatgctcagaactctgcaccaggactacatgctgatgta
ctgatagaagttcaaaagaaaactgtgacacttgagttctcaatgaacactttagcagaa
agagtaagaaaacttactcagctacaacagaaaaatacagaaatgctgaattatagaaga
tttaaggcaaaaattagtcctggagaaaataaggcagcggaggatgaattaagaaaagag
atacgtaaagagatgtttgcaaaaatggaaattattggtcagttcaatttagggtttata
attgccaagctgaagtctgacctcttcataattgaccaacatgctacagatgagaaatac
aattttgagatgttacaacagcacaccattcttcaaggtcagaagttgatagcgcctcaa
aatcttaatttaactgctgtaaatgaaactatattgatagaaaacttggagatattcaga
aaaaatggatttgattttgttattgatgaaaatgctcctgtaactcaaagggttaagctg
atttctttgccaacaagcaaaaactggacttttggtcctcaggacatagaagagctgatc
ttcatgctaagtgattgtcctggagtcatgtgtaggccatccagagtcagacagatgttt
gcttctcgagcttgtagaaaatctgtgatgattgggactgcacttaatgtaaatgagatg
aagaaattgatcacccacatgggtgagattgagcatccttggaactgtcctcatggaaga
cctaccatgaggcacatagccagtttagacttgatttctccagaataa
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